Properties
| Property Name | Value |
|---|
| TranscriptId | 596774 |
| Track | FilteredModels2 |
| ProteinId | 596688 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:367071..368243 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6893 ID=mRNA_6893|Name=jgi.p|Nanoce1779_2|596688|organism=Nannochloropsis oceanica|type=mRNA|length=829bp
ACAGACACCCACAACATCATGCTGAGCTTTCGAGCGACCCTCCTGGTTCT
CCTGCCCGCTATTGCCGCAGGCTTCCTGGCCCCCACGCCGGCTCTCAGCA
CGCCTGCCCGCTTGACGGTCACGGCCCTGAACAGCTGGGGGGGCAAAAAG
GCGAAAGTCGCGCCTGTGGTCGTCGAGCCCGAGATTATTGCCCCCGATTA
TCGTGTAGCCGCCGGCTTCTTTTTGGCTGGAGTAGGCCTAGCGGTCCCCC
CTCTGTCTAACCCGGGGGCGGGCGTTCCCTTGGCGGTGATCGGCGCCTTT
CTGGCCAGCCGGACGCAGAGAGTTCGATTTGTGTTTGATGAGGAAGCGAT
GGAGGTGATGACCGTTGGCGAAGATGGGGAGTTGAGCATGGAAAGGGAGA
ATTTTGCGGTGGGCGGCCGGAATCGGTGGGCATACAATACGTTTACGAAT
TGGGAGTTTTACCCCTCCCCGCAGGTGCCTATCCTCGTTTACTTCAAGGA
GACCCAGACGAAGCCCGAGGGCCAGATCCACTTCTTCCCTGTCATTGGTA
ACCCAGCGAAATTGTTGGAGAACTTTAGGAAGTACGTACCGCTCGGCAAG
TAATGGTCATGTAAGGGGGGAGAGGGGGAAGGAGACGTGAAGAGTGAGAA
TGGTGTGGTTGGACCAGCTGTGGTAAGAGTGTTGTAAGAATCGAAGAAAT
GGAAACGATGACTCTAAATCACTTCACTGTCGACATCAGGAATTGTCAAT
CTGTGCTTCTTCTTTTCCTTCTTTTGGTGGGGAGAACTGCCTCCTGATCG
GAAATTTGCGCGAGCGTTGACTTGGTCGT back to topprotein sequence of jgi.p|Nanoce1779_2|596688 >mRNA_6893-protein ID=mRNA_6893-protein|Name=jgi.p|Nanoce1779_2|596688|organism=Nannochloropsis oceanica|type=polypeptide|length=195bp
MLSFRATLLVLLPAIAAGFLAPTPALSTPARLTVTALNSWGGKKAKVAPV
VVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQ
RVRFVFDEEAMEVMTVGEDGELSMERENFAVGGRNRWAYNTFTNWEFYPS
PQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLENFRKYVPLGK* back to topmRNA from alignment at scaffold_17:367071..368243+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6893 ID=mRNA_6893|Name=jgi.p|Nanoce1779_2|596688|organism=Nannochloropsis oceanica|type=mRNA|length=1173bp|location=Sequence derived from alignment at scaffold_17:367071..368243+ (Nannochloropsis oceanica)
ACAGACACCCACAACATCATGCTGAGCTTTCGAGCGACCCTCCTGGTTCT
CCTGCCCGCTATTGCCGCAGGCTTCCTGGCCCCCACGCCGGCTCTCAGGT
ACGCCCTCGTTTTGTTCCTTTTCGTGATGACGATGCCTGTCGCGCCATGA
GGTGGCTTAAGTGTGCATAAGACCTAAAACAGCTAATTAATCGGGTTATT
GACAGTGTGTACTGTACAGAAGATTCGCGACAGGCGCCGCGATGAGAAGA
CGGCTGCAATCTGAAAATCACCCTTACACTCGTACTCCGTCCTGTCAACC
GACACACAGCCTCACCACCCACACGCGCAGCACGCCTGCCCGCTTGACGG
TCACGGCCCTGAACAGCTGGGGGGGCAAAAAGGCGAAAGTCGCGCCTGTG
GTCGTCGAGCCCGAGATTATTGCCCCCGATTATCGTGTAGCCGCCGGCTT
CTTTTTGGCTGGAGTAGGCCTAGCGGTCCCCCCTCTGTCTAACCCGGGGG
CGGGCGTTCCCTTGGCGGTGATCGGCGCCTTTCTGGCCAGCCGGACGCAG
AGAGTTCGATTTGTGTTTGATGAGGAAGCGATGGAGGTGATGACCGTTGG
CGAAGATGGGGAGTTGAGCATGGAAAGGGAGAATTTTGCGGTGGGCGGCC
GGAATCGGTGGGCATACAATACGTTTACGAATTGGGAGGTGCGTCATTTA
TTTGTTGGCGCACGCAAGATAAAACCAGAGGTGTTGCTGGGATATCAACA
GAAAATTTATCTGACTCACTCATCGTTCCCTTTCTCCTCTCTCTCCCTAG
TTTTACCCCTCCCCGCAGGTGCCTATCCTCGTTTACTTCAAGGAGACCCA
GACGAAGCCCGAGGGCCAGATCCACTTCTTCCCTGTCATTGGTAACCCAG
CGAAATTGTTGGAGAACTTTAGGAAGTACGTACCGCTCGGCAAGTAATGG
TCATGTAAGGGGGGAGAGGGGGAAGGAGACGTGAAGAGTGAGAATGGTGT
GGTTGGACCAGCTGTGGTAAGAGTGTTGTAAGAATCGAAGAAATGGAAAC
GATGACTCTAAATCACTTCACTGTCGACATCAGGAATTGTCAATCTGTGC
TTCTTCTTTTCCTTCTTTTGGTGGGGAGAACTGCCTCCTGATCGGAAATT
TGCGCGAGCGTTGACTTGGTCGT back to topCoding sequence (CDS) from alignment at scaffold_17:367071..368243+ >mRNA_6893 ID=mRNA_6893|Name=jgi.p|Nanoce1779_2|596688|organism=Nannochloropsis oceanica|type=CDS|length=1755bp|location=Sequence derived from alignment at scaffold_17:367071..368243+ (Nannochloropsis oceanica)
ATGCTGAGCTTTCGAGCGACCCTCCTGGTTCTCCTGCCCGCTATTGCCGC
AGGCTTCCTGGCCCCCACGCCGGCTCTCAGCACGCCTGCCCGCTTGACGG
TCACGGCCCTGAACAGCTGGGGGGGCAAAAAGGCGAAAGTCGCGCCTGTG
GTCGTCGAGCCCGAGATTATTGCCCCCGATTATCGTGTAGCCGCCGGCTT
CTTTTTGGCTGGAGTAGGCCTAGCGGTCCCCCCTCTGTCTAACCCGGGGG
CGGGCGTTCCCTTGGCGGTGATCGGCGCCTTTCTGGCCAGCCGGACGCAG
AGAGTTCGATTTGTGTTTGATGAGGAAGCGATGGAGGTGATGACCGTTGG
CGAAGATGGGGAGTTGAGCATGGAAAGGGAGAATTTTGCGGTGGGCGGCC
GGAATCGGTGGGCATACAATACGTTTACGAATTGGGAGTTTTACCCCTCC
CCGCAGGTGCCTATCCTCGTTTACTTCAAGGAGACCCAGACGAAGCCCGA
GGGCCAGATCCACTTCTTCCCTGTCATTGGTAACCCAGCGAAATTGTTGG
AGAACTTTAGGAAGTACGTACCGCTCGGCAAGTAAATGCTGAGCTTTCGA
GCGACCCTCCTGGTTCTCCTGCCCGCTATTGCCGCAGGCTTCCTGGCCCC
CACGCCGGCTCTCAGCACGCCTGCCCGCTTGACGGTCACGGCCCTGAACA
GCTGGGGGGGCAAAAAGGCGAAAGTCGCGCCTGTGGTCGTCGAGCCCGAG
ATTATTGCCCCCGATTATCGTGTAGCCGCCGGCTTCTTTTTGGCTGGAGT
AGGCCTAGCGGTCCCCCCTCTGTCTAACCCGGGGGCGGGCGTTCCCTTGG
CGGTGATCGGCGCCTTTCTGGCCAGCCGGACGCAGAGAGTTCGATTTGTG
TTTGATGAGGAAGCGATGGAGGTGATGACCGTTGGCGAAGATGGGGAGTT
GAGCATGGAAAGGGAGAATTTTGCGGTGGGCGGCCGGAATCGGTGGGCAT
ACAATACGTTTACGAATTGGGAGTTTTACCCCTCCCCGCAGGTGCCTATC
CTCGTTTACTTCAAGGAGACCCAGACGAAGCCCGAGGGCCAGATCCACTT
CTTCCCTGTCATTGGTAACCCAGCGAAATTGTTGGAGAACTTTAGGAAGT
ACGTACCGCTCGGCAAGTAAATGCTGAGCTTTCGAGCGACCCTCCTGGTT
CTCCTGCCCGCTATTGCCGCAGGCTTCCTGGCCCCCACGCCGGCTCTCAG
CACGCCTGCCCGCTTGACGGTCACGGCCCTGAACAGCTGGGGGGGCAAAA
AGGCGAAAGTCGCGCCTGTGGTCGTCGAGCCCGAGATTATTGCCCCCGAT
TATCGTGTAGCCGCCGGCTTCTTTTTGGCTGGAGTAGGCCTAGCGGTCCC
CCCTCTGTCTAACCCGGGGGCGGGCGTTCCCTTGGCGGTGATCGGCGCCT
TTCTGGCCAGCCGGACGCAGAGAGTTCGATTTGTGTTTGATGAGGAAGCG
ATGGAGGTGATGACCGTTGGCGAAGATGGGGAGTTGAGCATGGAAAGGGA
GAATTTTGCGGTGGGCGGCCGGAATCGGTGGGCATACAATACGTTTACGA
ATTGGGAGTTTTACCCCTCCCCGCAGGTGCCTATCCTCGTTTACTTCAAG
GAGACCCAGACGAAGCCCGAGGGCCAGATCCACTTCTTCCCTGTCATTGG
TAACCCAGCGAAATTGTTGGAGAACTTTAGGAAGTACGTACCGCTCGGCA
AGTAA back to top
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