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Properties
| Property Name | Value |
|---|
| TranscriptId | 560422 |
| Track | FilteredModels2 |
| ProteinId | 560336 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:158010..159911 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9183 ID=mRNA_9183|Name=jgi.p|Nanoce1779_2|560336|organism=Nannochloropsis oceanica|type=mRNA|length=1441bp
CAGACAGTCACTCAGGGAACCAAACATCATCAATAATGGCCCACCCGCAA
GAAGACATCGGTGCCACAAATCCGTCGACGAAGCGGGTCATTGGGCCTCT
GGTCTGGACTTCGGAGTGCCACAGCATTCTGGTGAACGGCCTGAAGGTGG
CAATTAAAGGGATCAATTGGTTTGGCTTTGAAACAACGGACGGCTGCGTC
CATGGGCTCTGGGACGGCCTTTCCAAATCTCTAAGTGACTACCTGGATCT
CTTACACACCCACGGGTTTAATGCGCTGCGACTCCCCTTCTCCGTCAAGC
TCGCCCTTGCCCTGGACAGCACGTACCCCAACTCTAGTTTCGTTGCCGCA
GACTCCTCACTTGCCGGCTTGAGCTGTGGGCAGATCATGGATCTACTGAT
TGTAGAATGTGGGAAGAGAGGGATTCTGGTTATGCTGGACCAGCACCGAT
TAGACCCCGAAAGAGGGATCTCGGATTTGTGGTATGATGAGGGATATGAG
GAGCCGGTCATCTTGAAGAGTTGGGATGTAATGGTGGGGAGGTATAAGAA
ATATTGGAACGTTTTCGCGCTTGATCTGAAAAATGAGCCGCACGGCTCCT
GTACGTGGGGGAGTGGGGAGGCCCTCACTGATTGGAAAGCGGCGAGCGAA
CGAGTGATGAAGTTTATCGCTCATGCCCACCCTGATTTTTTGGGGCTGTT
CTTTGTGAGCGGGATATGGGGAGGGGGGGGGCATTGGTGGGGAGGAAACT
TCAGAGGGGTGAGGATGAAGCCAGTAGACCTTGGCGAGGAGGGGATGAAT
CGACGGGTTGTCTACACGCCCCATGTTTACGGCCCGGACGTGTACCCTCA
GGCATATTTCTCGAGTTGGTCGTTTCCGAATAATTTGCCCGCAATTTGGG
AGGCGCATTGGGGATTTTTGCGGGGGATGGAAGGGAGGGGCGGAGGGGAG
GGAGGGAGGGCGGTGGTGGTCAGTGAGTGGGGAGGTTTCTGTAAGGGGAA
GGATGCCAAGTGGCAGGAGAAGGTGGCGAGATATCTGTGGGAAAGAGGGA
TGGCGGATAACTTTTACTGGTGTCTGAACCCTAACAGCGGTGACACCGGC
GGGATCCTCCTGGACGACTGGACTACTCTTCATATCGAAAAGCTTCGCAT
CCTCCACACTCTCCAGCCCGCTCCCACCCTTCTCCGTGAGTTAGACGTCC
TTCCCTCTTCACTTCCTGAAAAAGAGAACAAGAAGGGAGAGAAGGGGAGG
GAGGAGGAGAAGGAGGGGAAGGTAGTGAGGCTGTATGAGTACCAGCTGGG
GGTCGAAACGGCCGCCCTCTCCTCCACGGTAGCTGCGGTGTCAGCTAAAA
AGGTCAAGAGGTGCTTTGGCCTATTTTGAGGAGGATTGAGGAATTTATGT
GCGTGTGTCTCTATGAGGAATTTATGTGCGTGTGTCTCTAT back to topprotein sequence of jgi.p|Nanoce1779_2|560336 >mRNA_9183-protein ID=mRNA_9183-protein|Name=jgi.p|Nanoce1779_2|560336|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MAHPQEDIGATNPSTKRVIGPLVWTSECHSILVNGLKVAIKGINWFGFET
TDGCVHGLWDGLSKSLSDYLDLLHTHGFNALRLPFSVKLALALDSTYPNS
SFVAADSSLAGLSCGQIMDLLIVECGKRGILVMLDQHRLDPERGISDLWY
DEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDW
KAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLG
EEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEG
RGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWCLNPN
SGDTGGILLDDWTTLHIEKLRILHTLQPAPTLLRELDVLPSSLPEKENKK
GEKGREEEKEGKVVRLYEYQLGVETAALSSTVAAVSAKKVKRCFGLF* back to topmRNA from alignment at scaffold_36:158010..159911- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9183 ID=mRNA_9183|Name=jgi.p|Nanoce1779_2|560336|organism=Nannochloropsis oceanica|type=mRNA|length=1902bp|location=Sequence derived from alignment at scaffold_36:158010..159911- (Nannochloropsis oceanica)
CAGACAGTCACTCAGGGAACCAAACATCATCAATAATGGCCCACCCGCAA
GAAGACATCGGTGCCACAAATCCGTCGACGAAGCGGGTCATTGGGCCTCT
GGTCTGGACTTCGGAGTGCCACAGCATTCTGGTGAACGGCCTGAAGGTGG
CAATTAAAGGGATCAATTGGTTTGGCTTTGGTACGTCGATGCGTACATGG
GAAGGGGGAAGGAGGAGATGTCGTTGTCGTTCTTCCTCTCACCCTTAGGA
TGGGGTAAAGCGGGAAGGGGTAGGCTTGTCGCATACGTTTAGGCAGTATC
CGTAGCCATTTAATACCTTAAGGTTGTGCCCGGGAGATCCGTGCGCAGAG
AAGAAAGCGTGTAGCCATGGTTTGTCAAAAGCGCAGCGTTGGGGCGCTGT
CTCTTTTTGCAACTCTCTTCTCCCTTCTCCCTTGCGCCCTTATTCCCTTT
CTGCCACCCATCTTTCCAAACACTCCTAGAAACAACGGACGGCTGCGTCC
ATGGGCTCTGGGACGGCCTTTCCAAATCTCTAAGTGACTACCTGGATCTC
TTACACACCCACGGGTTTAATGCGCTGCGACTCCCCTTCTCCGTCAAGCT
CGCCCTTGCCCTGGACAGCACGTACCCCAACTCTAGTTTCGTTGCCGCAG
ACTCCTCACTTGCCGGCTTGAGCTGTGGGCAGATCATGGATCTACTGATT
GTAGAATGTGGGAAGAGAGGGATTCTGGTTATGCTGGACCAGCACCGATT
AGACCCCGAAAGAGGGATCTCGGATTTGTGGTATGATGAGGGATATGAGG
AGCCGGTCATCTTGAAGAGTTGGGATGTAATGGTGGGGAGGTATAAGAAA
TATTGGAACGTTTTCGCGCTTGATCTGAAAAATGAGCCGCACGGCTCCTG
TACGTGGGGGAGTGGGGAGGCCCTCACTGATTGGAAAGCGGCGAGCGAAC
GAGTGATGAAGTTTATCGCTCATGCCCACCCTGATTTTTTGGGGCTGTTC
TTTGTGAGCGGGATATGGGGAGGGGGGGGGCATTGGTGGGGAGGAAACTT
CAGAGGGGTGAGGATGAAGCCAGTAGACCTTGGCGAGGAGGGGATGAATC
GACGGGTTGTCTACACGCCCCATGTTTACGGCCCGGACGTGTACCCTCAG
GCATATTTCTCGAGTTGGTCGTTTCCGAATAATTTGCCCGCAATTTGGGA
GGCGCATTGGGGATTTTTGCGGGGGATGGAAGGGAGGGGCGGAGGGGAGG
GAGGGAGGGCGGTGGTGGTCAGTGAGTGGGGAGGTTTCTGTAAGGGGAAG
GATGCCAAGTGGCAGGAGAAGGTGGCGAGATATCTGTGGGAAAGAGGGAT
GGCGGATAACTTTTACTGGTGGTGCGTAGGTAGGGAGAAGGAGCGGGAGG
GGCAAGGTGGCTTTGCGTGCTATATTTGCTTTGACTATCTTTGTCTCATC
CTGCAATTAAGCGCGTGATGGTGCTCGTCTGCGAGCATGTCAACCTCACC
TTTACACTCTCTATACCACAAATACGTGCACAGTCTGAACCCTAACAGCG
GTGACACCGGCGGGATCCTCCTGGACGACTGGACTACTCTTCATATCGAA
AAGCTTCGCATCCTCCACACTCTCCAGCCCGCTCCCACCCTTCTCCGTGA
GTTAGACGTCCTTCCCTCTTCACTTCCTGAAAAAGAGAACAAGAAGGGAG
AGAAGGGGAGGGAGGAGGAGAAGGAGGGGAAGGTAGTGAGGCTGTATGAG
TACCAGCTGGGGGTCGAAACGGCCGCCCTCTCCTCCACGGTAGCTGCGGT
GTCAGCTAAAAAGGTCAAGAGGTGCTTTGGCCTATTTTGAGGAGGATTGA
GGAATTTATGTGCGTGTGTCTCTATGAGGAATTTATGTGCGTGTGTCTCT
AT back to topCoding sequence (CDS) from alignment at scaffold_36:158010..159911- >mRNA_9183 ID=mRNA_9183|Name=jgi.p|Nanoce1779_2|560336|organism=Nannochloropsis oceanica|type=CDS|length=4032bp|location=Sequence derived from alignment at scaffold_36:158010..159911- (Nannochloropsis oceanica)
TCTGAACCCTAACAGCGGTGACACCGGCGGGATCCTCCTGGACGACTGGA
CTACTCTTCATATCGAAAAGCTTCGCATCCTCCACACTCTCCAGCCCGCT
CCCACCCTTCTCCGTGAGTTAGACGTCCTTCCCTCTTCACTTCCTGAAAA
AGAGAACAAGAAGGGAGAGAAGGGGAGGGAGGAGGAGAAGGAGGGGAAGG
TAGTGAGGCTGTATGAGTACCAGCTGGGGGTCGAAACGGCCGCCCTCTCC
TCCACGGTAGCTGCGGTGTCAGCTAAAAAGGTCAAGAGGTGCTTTGGCCT
ATTTTGAAAACAACGGACGGCTGCGTCCATGGGCTCTGGGACGGCCTTTC
CAAATCTCTAAGTGACTACCTGGATCTCTTACACACCCACGGGTTTAATG
CGCTGCGACTCCCCTTCTCCGTCAAGCTCGCCCTTGCCCTGGACAGCACG
TACCCCAACTCTAGTTTCGTTGCCGCAGACTCCTCACTTGCCGGCTTGAG
CTGTGGGCAGATCATGGATCTACTGATTGTAGAATGTGGGAAGAGAGGGA
TTCTGGTTATGCTGGACCAGCACCGATTAGACCCCGAAAGAGGGATCTCG
GATTTGTGGTATGATGAGGGATATGAGGAGCCGGTCATCTTGAAGAGTTG
GGATGTAATGGTGGGGAGGTATAAGAAATATTGGAACGTTTTCGCGCTTG
ATCTGAAAAATGAGCCGCACGGCTCCTGTACGTGGGGGAGTGGGGAGGCC
CTCACTGATTGGAAAGCGGCGAGCGAACGAGTGATGAAGTTTATCGCTCA
TGCCCACCCTGATTTTTTGGGGCTGTTCTTTGTGAGCGGGATATGGGGAG
GGGGGGGGCATTGGTGGGGAGGAAACTTCAGAGGGGTGAGGATGAAGCCA
GTAGACCTTGGCGAGGAGGGGATGAATCGACGGGTTGTCTACACGCCCCA
TGTTTACGGCCCGGACGTGTACCCTCAGGCATATTTCTCGAGTTGGTCGT
TTCCGAATAATTTGCCCGCAATTTGGGAGGCGCATTGGGGATTTTTGCGG
GGGATGGAAGGGAGGGGCGGAGGGGAGGGAGGGAGGGCGGTGGTGGTCAG
TGAGTGGGGAGGTTTCTGTAAGGGGAAGGATGCCAAGTGGCAGGAGAAGG
TGGCGAGATATCTGTGGGAAAGAGGGATGGCGGATAACTTTTACTGGTGA
TGGCCCACCCGCAAGAAGACATCGGTGCCACAAATCCGTCGACGAAGCGG
GTCATTGGGCCTCTGGTCTGGACTTCGGAGTGCCACAGCATTCTGGTGAA
CGGCCTGAAGGTGGCAATTAAAGGGATCAATTGGTTTGGCTTTGTCTGAA
CCCTAACAGCGGTGACACCGGCGGGATCCTCCTGGACGACTGGACTACTC
TTCATATCGAAAAGCTTCGCATCCTCCACACTCTCCAGCCCGCTCCCACC
CTTCTCCGTGAGTTAGACGTCCTTCCCTCTTCACTTCCTGAAAAAGAGAA
CAAGAAGGGAGAGAAGGGGAGGGAGGAGGAGAAGGAGGGGAAGGTAGTGA
GGCTGTATGAGTACCAGCTGGGGGTCGAAACGGCCGCCCTCTCCTCCACG
GTAGCTGCGGTGTCAGCTAAAAAGGTCAAGAGGTGCTTTGGCCTATTTTG
AAAACAACGGACGGCTGCGTCCATGGGCTCTGGGACGGCCTTTCCAAATC
TCTAAGTGACTACCTGGATCTCTTACACACCCACGGGTTTAATGCGCTGC
GACTCCCCTTCTCCGTCAAGCTCGCCCTTGCCCTGGACAGCACGTACCCC
AACTCTAGTTTCGTTGCCGCAGACTCCTCACTTGCCGGCTTGAGCTGTGG
GCAGATCATGGATCTACTGATTGTAGAATGTGGGAAGAGAGGGATTCTGG
TTATGCTGGACCAGCACCGATTAGACCCCGAAAGAGGGATCTCGGATTTG
TGGTATGATGAGGGATATGAGGAGCCGGTCATCTTGAAGAGTTGGGATGT
AATGGTGGGGAGGTATAAGAAATATTGGAACGTTTTCGCGCTTGATCTGA
AAAATGAGCCGCACGGCTCCTGTACGTGGGGGAGTGGGGAGGCCCTCACT
GATTGGAAAGCGGCGAGCGAACGAGTGATGAAGTTTATCGCTCATGCCCA
CCCTGATTTTTTGGGGCTGTTCTTTGTGAGCGGGATATGGGGAGGGGGGG
GGCATTGGTGGGGAGGAAACTTCAGAGGGGTGAGGATGAAGCCAGTAGAC
CTTGGCGAGGAGGGGATGAATCGACGGGTTGTCTACACGCCCCATGTTTA
CGGCCCGGACGTGTACCCTCAGGCATATTTCTCGAGTTGGTCGTTTCCGA
ATAATTTGCCCGCAATTTGGGAGGCGCATTGGGGATTTTTGCGGGGGATG
GAAGGGAGGGGCGGAGGGGAGGGAGGGAGGGCGGTGGTGGTCAGTGAGTG
GGGAGGTTTCTGTAAGGGGAAGGATGCCAAGTGGCAGGAGAAGGTGGCGA
GATATCTGTGGGAAAGAGGGATGGCGGATAACTTTTACTGGTGATGGCCC
ACCCGCAAGAAGACATCGGTGCCACAAATCCGTCGACGAAGCGGGTCATT
GGGCCTCTGGTCTGGACTTCGGAGTGCCACAGCATTCTGGTGAACGGCCT
GAAGGTGGCAATTAAAGGGATCAATTGGTTTGGCTTTGTCTGAACCCTAA
CAGCGGTGACACCGGCGGGATCCTCCTGGACGACTGGACTACTCTTCATA
TCGAAAAGCTTCGCATCCTCCACACTCTCCAGCCCGCTCCCACCCTTCTC
CGTGAGTTAGACGTCCTTCCCTCTTCACTTCCTGAAAAAGAGAACAAGAA
GGGAGAGAAGGGGAGGGAGGAGGAGAAGGAGGGGAAGGTAGTGAGGCTGT
ATGAGTACCAGCTGGGGGTCGAAACGGCCGCCCTCTCCTCCACGGTAGCT
GCGGTGTCAGCTAAAAAGGTCAAGAGGTGCTTTGGCCTATTTTGAAAACA
ACGGACGGCTGCGTCCATGGGCTCTGGGACGGCCTTTCCAAATCTCTAAG
TGACTACCTGGATCTCTTACACACCCACGGGTTTAATGCGCTGCGACTCC
CCTTCTCCGTCAAGCTCGCCCTTGCCCTGGACAGCACGTACCCCAACTCT
AGTTTCGTTGCCGCAGACTCCTCACTTGCCGGCTTGAGCTGTGGGCAGAT
CATGGATCTACTGATTGTAGAATGTGGGAAGAGAGGGATTCTGGTTATGC
TGGACCAGCACCGATTAGACCCCGAAAGAGGGATCTCGGATTTGTGGTAT
GATGAGGGATATGAGGAGCCGGTCATCTTGAAGAGTTGGGATGTAATGGT
GGGGAGGTATAAGAAATATTGGAACGTTTTCGCGCTTGATCTGAAAAATG
AGCCGCACGGCTCCTGTACGTGGGGGAGTGGGGAGGCCCTCACTGATTGG
AAAGCGGCGAGCGAACGAGTGATGAAGTTTATCGCTCATGCCCACCCTGA
TTTTTTGGGGCTGTTCTTTGTGAGCGGGATATGGGGAGGGGGGGGGCATT
GGTGGGGAGGAAACTTCAGAGGGGTGAGGATGAAGCCAGTAGACCTTGGC
GAGGAGGGGATGAATCGACGGGTTGTCTACACGCCCCATGTTTACGGCCC
GGACGTGTACCCTCAGGCATATTTCTCGAGTTGGTCGTTTCCGAATAATT
TGCCCGCAATTTGGGAGGCGCATTGGGGATTTTTGCGGGGGATGGAAGGG
AGGGGCGGAGGGGAGGGAGGGAGGGCGGTGGTGGTCAGTGAGTGGGGAGG
TTTCTGTAAGGGGAAGGATGCCAAGTGGCAGGAGAAGGTGGCGAGATATC
TGTGGGAAAGAGGGATGGCGGATAACTTTTACTGGTGATGGCCCACCCGC
AAGAAGACATCGGTGCCACAAATCCGTCGACGAAGCGGGTCATTGGGCCT
CTGGTCTGGACTTCGGAGTGCCACAGCATTCTGGTGAACGGCCTGAAGGT
GGCAATTAAAGGGATCAATTGGTTTGGCTTTG back to top
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