jgi.p|Nanoce1779_2|642970, mRNA_9837 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|642970
Unique NamemRNA_9837
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length304
Alignment locationscaffold_45:21..324 -

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Properties
Property NameValue
TranscriptId643056
TrackFilteredModels2
ProteinId642970
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_45supercontigscaffold_45:21..324 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|642970gene_9837Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_9837CDS_9837Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|642970mRNA_9837-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_9837 ID=mRNA_9837|Name=jgi.p|Nanoce1779_2|642970|organism=Nannochloropsis oceanica|type=mRNA|length=304bp
ATGGCCAACGCCAAAAATGCCAAGGCCGCCGCCAAGAAGGCTGGGGGAGG
CAAGGGGGTCAAGAAGAGGGCCTCGCCTGCTGCTGCAAAGGGTACTGCTG
CTGCCGGCGGTATCAAGGGGAGCAAGACCGCCGTGAGTGCGGTCAGTGCC
AAGAGTCGCGTGACACCCAAGAAGCCAAAGGCTCGCGTGCTGCGCTTGCT
CAAGGCCAAGGAGCCCAAGGTGGTGGAGGGAGGGAAGCAGGCCCTGTTTC
TTAAGGGGACCAAGTGCCCAGAGCTCTTGCAGACGGTGTTGCGCGATTTG
GTGC
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protein sequence of jgi.p|Nanoce1779_2|642970

>mRNA_9837-protein ID=mRNA_9837-protein|Name=jgi.p|Nanoce1779_2|642970|organism=Nannochloropsis oceanica|type=polypeptide|length=101bp
MANAKNAKAAAKKAGGGKGVKKRASPAAAKGTAAAGGIKGSKTAVSAVSA
KSRVTPKKPKARVLRLLKAKEPKVVEGGKQALFLKGTKCPELLQTVLRDL
V
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mRNA from alignment at scaffold_45:21..324-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9837 ID=mRNA_9837|Name=jgi.p|Nanoce1779_2|642970|organism=Nannochloropsis oceanica|type=mRNA|length=304bp|location=Sequence derived from alignment at scaffold_45:21..324- (Nannochloropsis oceanica)
ATGGCCAACGCCAAAAATGCCAAGGCCGCCGCCAAGAAGGCTGGGGGAGG
CAAGGGGGTCAAGAAGAGGGCCTCGCCTGCTGCTGCAAAGGGTACTGCTG
CTGCCGGCGGTATCAAGGGGAGCAAGACCGCCGTGAGTGCGGTCAGTGCC
AAGAGTCGCGTGACACCCAAGAAGCCAAAGGCTCGCGTGCTGCGCTTGCT
CAAGGCCAAGGAGCCCAAGGTGGTGGAGGGAGGGAAGCAGGCCCTGTTTC
TTAAGGGGACCAAGTGCCCAGAGCTCTTGCAGACGGTGTTGCGCGATTTG
GTGC
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Coding sequence (CDS) from alignment at scaffold_45:21..324-

>mRNA_9837 ID=mRNA_9837|Name=jgi.p|Nanoce1779_2|642970|organism=Nannochloropsis oceanica|type=CDS|length=304bp|location=Sequence derived from alignment at scaffold_45:21..324- (Nannochloropsis oceanica)
ATGGCCAACGCCAAAAATGCCAAGGCCGCCGCCAAGAAGGCTGGGGGAGG
CAAGGGGGTCAAGAAGAGGGCCTCGCCTGCTGCTGCAAAGGGTACTGCTG
CTGCCGGCGGTATCAAGGGGAGCAAGACCGCCGTGAGTGCGGTCAGTGCC
AAGAGTCGCGTGACACCCAAGAAGCCAAAGGCTCGCGTGCTGCGCTTGCT
CAAGGCCAAGGAGCCCAAGGTGGTGGAGGGAGGGAAGCAGGCCCTGTTTC
TTAAGGGGACCAAGTGCCCAGAGCTCTTGCAGACGGTGTTGCGCGATTTG
GTGC
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Synonyms
Publications