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Properties
Property Name | Value |
TranscriptId | 374154 |
Track | FilteredModels2 |
ProteinId | 374068 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_60 | supercontig | scaffold_60:23910..26281 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10302 ID=mRNA_10302|Name=jgi.p|Nanoce1779_2|374068|organism=Nannochloropsis oceanica|type=mRNA|length=2290bp AGGTGAGAGTGCCTATGAACAATGTATTCAGTGTGGCAGTATCCTCGAGA ATGAGCCTCAGGACACACACAGGTCACATCGACGGGGCTAATAGCAGTCT TACGGCTGGGCCATGTTCACTTTTTTCGTGGCGGCTGCCGTTGGAACACG ACGACGTAATTTAGGTATTTAGCCCCCCAAGGCGTCGAGTTTTTATTTCC CAGCCTCGCCACCTCAAGAAAAAAAAAAGAGATATCCAAGCATTTCATCA ACAATGCCGCCCGCTCTGGACATCAAAGAGGCCAAGCAACCCTTGTTATC GGCCCAGACCGATCAAAGAGGGGCGATCGATGACCAAAGCGGTGAGGCGG GTACCGTGGACGCTCAAGCGCTGCAAGACAAGCAGCAACCTCCTGCCAAT CAGCACAGTGAGGAGGCTAATCTGGAGGAGCAGCAAGCCGAGTCCAGACC TAGACATGACCGTCTTGCTCAAATCAAGCAATATTGTGCCCATGCCTTTT CTATTCTTCAAGAGCTTCTTGCAATCCCCATCATGGAAGCCTTGGGCACC TTGACATTGACCCTTGTGGTCGGCCTTATCACCCGCCCCGCCGCCGCTAC TGCCCCACTAACCGCCGCGTTAGCCATTGCCGCCGTCTTACTGGCGATGA TTCACGCTGGAGCCCGCATTTCAGGCGCGCATTACAACCCAGCAGTAACA TTTGCTTTGGTCCTGCTGGGCTGCACATCTCCTTTCCAATTCTTGGTCTA CGTAGGGAGTCAACTCGCCGGGGCCATCGGCGGCGCCCACCTAGCAAAGG CTCTCGCTTCTCCAGATCCACTTGCCGACCCGTTTTTGCAGGGGGGCATT AATGGAAAATTAGCGCTGGTAGAGATATCTTATACCTTTGCTTTGGTCTT CGTGATCTTACACACGGTGCTCGCCCGCACTCAGCAGCCCAATAGTTTTT CAGGAGCTGCCATCTGTGCCACGATCGCGGCGGCGGCTGCTGTCGGTGCT GTCATGAATCCCGCGATATCGACGGGTTTATATGTGGCGGGCATGAGTGA GGAGCGCGCGGGGGGGAAAGGGGGGGAGGAGGGGCTGTGGATTCGCTGGT TGCTGCCCATGGTGGGGGCCTTGGTAGCCACATGCCTGTTTTATTTGACA AATCCCATGGATGCCATGTTCCCGCCAGGCCAGGACGAGGCAGCCGCTGC CGCTGCAGCAGCAGCAGCAGCAGCAATGTCGTCGCATAGGATCGGAAGAA GTGGCATGGCAGGAGGAGTCGGAGGGGGAGGTGGGCGGACACCCCTCCTC CGCGATGGTTCCTCGTTCTCGTCGGTCATCTCTTCATACTCCCATGTGCT TTTCAAAGTCTCGCGCGTCTTGTCCGTGTATCTGATGGAGTTTCAAGGCA CCTTCCTCATTACCCTCACCATTATCCTCTCGCTCACTGCTTCCTCCTCC CCTTCCTCCCTCGCTCCCTCCCCCGCCGCCACTGCCGGCCTGCTCCTTAC GGGCCTCGTTTTCACCGGAGGGTACATCAGCGGTGCTCATCTTAATCCAG CCGTGACCTTCGGCGTTTTCCTCTTCCGTCCTCGACGAAGTGACGTGCCC AAGGTGTTAGCCTACGTGGCTGTCCAAGTGCTCGCCTCTGTTTTCGCAAC AGGAGCCACTCGCCTCGCCCTCGGCCATGCCGCTTGTCAAACCGCCCTCC CCTTTCCGCAGGCTCCGCATAAGTGGCAACAAGCCCTGGGGGTCGAGACC GTGTGTACAGCCCTCCTTGTCCTCGTTGTCCTCCTACTAGGTGCGGCGGG CGCGCAGGGGCATCCGTACTATGGGCTGGCGATCGGTGCTGCTTTAACGA GTGGGTTGTATGCTGCAGGGTCTATCTCGGGAGGAGGATTAAATCCTGCG GTGGCCTCGGGATTGTACGCCCTGAATGCGACGAAGGGACAGGGCGAGGA GGCGTGGATTTATTGGATTGGGCCTTTATGTGGATCTGTGGTAGGGGTTT TGTTGGCGGGGTGCTTGGCGCCTCGGGGATGGGCGATGGGAAGAAGGAGG GCGATGGAGAGGAGGGAGGAGGAGGAGGTGAAAGAAGAGGAGGAAGAAGG AGACGAGGACGAAGGCAAGGAGGAATGGATGGAGAAGGGGGAGATAACTG TGACGGAGGAAGAGGAGGGAAAGAAGAAGGAGGAGGAAGTAGCTGCGACG TAGGCGGAGGATCGTCGCAGTAATTAGGAAGTTATGAATGATAAATATTT TTGTTTATTTGCGGAGGAGGTCTAGAGATGGATAACGTGT back to topprotein sequence of jgi.p|Nanoce1779_2|374068 >mRNA_10302-protein ID=mRNA_10302-protein|Name=jgi.p|Nanoce1779_2|374068|organism=Nannochloropsis oceanica|type=polypeptide|length=650bp MPPALDIKEAKQPLLSAQTDQRGAIDDQSGEAGTVDAQALQDKQQPPANQ HSEEANLEEQQAESRPRHDRLAQIKQYCAHAFSILQELLAIPIMEALGTL TLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTF ALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGIN GKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATIAAAAAVGAV MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTN PMDAMFPPGQDEAAAAAAAAAAAAMSSHRIGRSGMAGGVGGGGGRTPLLR DGSSFSSVISSYSHVLFKVSRVLSVYLMEFQGTFLITLTIILSLTASSSP SSLAPSPAATAGLLLTGLVFTGGYISGAHLNPAVTFGVFLFRPRRSDVPK VLAYVAVQVLASVFATGATRLALGHAACQTALPFPQAPHKWQQALGVETV CTALLVLVVLLLGAAGAQGHPYYGLAIGAALTSGLYAAGSISGGGLNPAV ASGLYALNATKGQGEEAWIYWIGPLCGSVVGVLLAGCLAPRGWAMGRRRA MERREEEEVKEEEEEGDEDEGKEEWMEKGEITVTEEEEGKKKEEEVAAT* back to topmRNA from alignment at scaffold_60:23910..26281+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10302 ID=mRNA_10302|Name=jgi.p|Nanoce1779_2|374068|organism=Nannochloropsis oceanica|type=mRNA|length=2372bp|location=Sequence derived from alignment at scaffold_60:23910..26281+ (Nannochloropsis oceanica) AGGTGAGAGTGCCTATGAACAATGTATTCAGTGTGGCAGTATCCTCGAGA
ATGAGCCTCAGGACACACACAGGTCACATCGACGGGGCTAATAGCAGTCT
TACGGCTGGGCCATGTTCACTTTTTTCGTGGCGGCTGCCGTTGGAACACG
ACGACGTAATTTAGGTATTTAGCCCCCCAAGGTCAGTTCAGACTTGCCTT
GAAGCTTGTCTAACATTATTTACTGTCTTTCTCACTCTCTCTCTGCACCA
TTCCTCCCCACAGGCGTCGAGTTTTTATTTCCCAGCCTCGCCACCTCAAG
AAAAAAAAAAGAGATATCCAAGCATTTCATCAACAATGCCGCCCGCTCTG
GACATCAAAGAGGCCAAGCAACCCTTGTTATCGGCCCAGACCGATCAAAG
AGGGGCGATCGATGACCAAAGCGGTGAGGCGGGTACCGTGGACGCTCAAG
CGCTGCAAGACAAGCAGCAACCTCCTGCCAATCAGCACAGTGAGGAGGCT
AATCTGGAGGAGCAGCAAGCCGAGTCCAGACCTAGACATGACCGTCTTGC
TCAAATCAAGCAATATTGTGCCCATGCCTTTTCTATTCTTCAAGAGCTTC
TTGCAATCCCCATCATGGAAGCCTTGGGCACCTTGACATTGACCCTTGTG
GTCGGCCTTATCACCCGCCCCGCCGCCGCTACTGCCCCACTAACCGCCGC
GTTAGCCATTGCCGCCGTCTTACTGGCGATGATTCACGCTGGAGCCCGCA
TTTCAGGCGCGCATTACAACCCAGCAGTAACATTTGCTTTGGTCCTGCTG
GGCTGCACATCTCCTTTCCAATTCTTGGTCTACGTAGGGAGTCAACTCGC
CGGGGCCATCGGCGGCGCCCACCTAGCAAAGGCTCTCGCTTCTCCAGATC
CACTTGCCGACCCGTTTTTGCAGGGGGGCATTAATGGAAAATTAGCGCTG
GTAGAGATATCTTATACCTTTGCTTTGGTCTTCGTGATCTTACACACGGT
GCTCGCCCGCACTCAGCAGCCCAATAGTTTTTCAGGAGCTGCCATCTGTG
CCACGATCGCGGCGGCGGCTGCTGTCGGTGCTGTCATGAATCCCGCGATA
TCGACGGGTTTATATGTGGCGGGCATGAGTGAGGAGCGCGCGGGGGGGAA
AGGGGGGGAGGAGGGGCTGTGGATTCGCTGGTTGCTGCCCATGGTGGGGG
CCTTGGTAGCCACATGCCTGTTTTATTTGACAAATCCCATGGATGCCATG
TTCCCGCCAGGCCAGGACGAGGCAGCCGCTGCCGCTGCAGCAGCAGCAGC
AGCAGCAATGTCGTCGCATAGGATCGGAAGAAGTGGCATGGCAGGAGGAG
TCGGAGGGGGAGGTGGGCGGACACCCCTCCTCCGCGATGGTTCCTCGTTC
TCGTCGGTCATCTCTTCATACTCCCATGTGCTTTTCAAAGTCTCGCGCGT
CTTGTCCGTGTATCTGATGGAGTTTCAAGGCACCTTCCTCATTACCCTCA
CCATTATCCTCTCGCTCACTGCTTCCTCCTCCCCTTCCTCCCTCGCTCCC
TCCCCCGCCGCCACTGCCGGCCTGCTCCTTACGGGCCTCGTTTTCACCGG
AGGGTACATCAGCGGTGCTCATCTTAATCCAGCCGTGACCTTCGGCGTTT
TCCTCTTCCGTCCTCGACGAAGTGACGTGCCCAAGGTGTTAGCCTACGTG
GCTGTCCAAGTGCTCGCCTCTGTTTTCGCAACAGGAGCCACTCGCCTCGC
CCTCGGCCATGCCGCTTGTCAAACCGCCCTCCCCTTTCCGCAGGCTCCGC
ATAAGTGGCAACAAGCCCTGGGGGTCGAGACCGTGTGTACAGCCCTCCTT
GTCCTCGTTGTCCTCCTACTAGGTGCGGCGGGCGCGCAGGGGCATCCGTA
CTATGGGCTGGCGATCGGTGCTGCTTTAACGAGTGGGTTGTATGCTGCAG
GGTCTATCTCGGGAGGAGGATTAAATCCTGCGGTGGCCTCGGGATTGTAC
GCCCTGAATGCGACGAAGGGACAGGGCGAGGAGGCGTGGATTTATTGGAT
TGGGCCTTTATGTGGATCTGTGGTAGGGGTTTTGTTGGCGGGGTGCTTGG
CGCCTCGGGGATGGGCGATGGGAAGAAGGAGGGCGATGGAGAGGAGGGAG
GAGGAGGAGGTGAAAGAAGAGGAGGAAGAAGGAGACGAGGACGAAGGCAA
GGAGGAATGGATGGAGAAGGGGGAGATAACTGTGACGGAGGAAGAGGAGG
GAAAGAAGAAGGAGGAGGAAGTAGCTGCGACGTAGGCGGAGGATCGTCGC
AGTAATTAGGAAGTTATGAATGATAAATATTTTTGTTTATTTGCGGAGGA
GGTCTAGAGATGGATAACGTGT back to topCoding sequence (CDS) from alignment at scaffold_60:23910..26281+ >mRNA_10302 ID=mRNA_10302|Name=jgi.p|Nanoce1779_2|374068|organism=Nannochloropsis oceanica|type=CDS|length=1950bp|location=Sequence derived from alignment at scaffold_60:23910..26281+ (Nannochloropsis oceanica) ATGCCGCCCGCTCTGGACATCAAAGAGGCCAAGCAACCCTTGTTATCGGC CCAGACCGATCAAAGAGGGGCGATCGATGACCAAAGCGGTGAGGCGGGTA CCGTGGACGCTCAAGCGCTGCAAGACAAGCAGCAACCTCCTGCCAATCAG CACAGTGAGGAGGCTAATCTGGAGGAGCAGCAAGCCGAGTCCAGACCTAG ACATGACCGTCTTGCTCAAATCAAGCAATATTGTGCCCATGCCTTTTCTA TTCTTCAAGAGCTTCTTGCAATCCCCATCATGGAAGCCTTGGGCACCTTG ACATTGACCCTTGTGGTCGGCCTTATCACCCGCCCCGCCGCCGCTACTGC CCCACTAACCGCCGCGTTAGCCATTGCCGCCGTCTTACTGGCGATGATTC ACGCTGGAGCCCGCATTTCAGGCGCGCATTACAACCCAGCAGTAACATTT GCTTTGGTCCTGCTGGGCTGCACATCTCCTTTCCAATTCTTGGTCTACGT AGGGAGTCAACTCGCCGGGGCCATCGGCGGCGCCCACCTAGCAAAGGCTC TCGCTTCTCCAGATCCACTTGCCGACCCGTTTTTGCAGGGGGGCATTAAT GGAAAATTAGCGCTGGTAGAGATATCTTATACCTTTGCTTTGGTCTTCGT GATCTTACACACGGTGCTCGCCCGCACTCAGCAGCCCAATAGTTTTTCAG GAGCTGCCATCTGTGCCACGATCGCGGCGGCGGCTGCTGTCGGTGCTGTC ATGAATCCCGCGATATCGACGGGTTTATATGTGGCGGGCATGAGTGAGGA GCGCGCGGGGGGGAAAGGGGGGGAGGAGGGGCTGTGGATTCGCTGGTTGC TGCCCATGGTGGGGGCCTTGGTAGCCACATGCCTGTTTTATTTGACAAAT CCCATGGATGCCATGTTCCCGCCAGGCCAGGACGAGGCAGCCGCTGCCGC TGCAGCAGCAGCAGCAGCAGCAATGTCGTCGCATAGGATCGGAAGAAGTG GCATGGCAGGAGGAGTCGGAGGGGGAGGTGGGCGGACACCCCTCCTCCGC GATGGTTCCTCGTTCTCGTCGGTCATCTCTTCATACTCCCATGTGCTTTT CAAAGTCTCGCGCGTCTTGTCCGTGTATCTGATGGAGTTTCAAGGCACCT TCCTCATTACCCTCACCATTATCCTCTCGCTCACTGCTTCCTCCTCCCCT TCCTCCCTCGCTCCCTCCCCCGCCGCCACTGCCGGCCTGCTCCTTACGGG CCTCGTTTTCACCGGAGGGTACATCAGCGGTGCTCATCTTAATCCAGCCG TGACCTTCGGCGTTTTCCTCTTCCGTCCTCGACGAAGTGACGTGCCCAAG GTGTTAGCCTACGTGGCTGTCCAAGTGCTCGCCTCTGTTTTCGCAACAGG AGCCACTCGCCTCGCCCTCGGCCATGCCGCTTGTCAAACCGCCCTCCCCT TTCCGCAGGCTCCGCATAAGTGGCAACAAGCCCTGGGGGTCGAGACCGTG TGTACAGCCCTCCTTGTCCTCGTTGTCCTCCTACTAGGTGCGGCGGGCGC GCAGGGGCATCCGTACTATGGGCTGGCGATCGGTGCTGCTTTAACGAGTG GGTTGTATGCTGCAGGGTCTATCTCGGGAGGAGGATTAAATCCTGCGGTG GCCTCGGGATTGTACGCCCTGAATGCGACGAAGGGACAGGGCGAGGAGGC GTGGATTTATTGGATTGGGCCTTTATGTGGATCTGTGGTAGGGGTTTTGT TGGCGGGGTGCTTGGCGCCTCGGGGATGGGCGATGGGAAGAAGGAGGGCG ATGGAGAGGAGGGAGGAGGAGGAGGTGAAAGAAGAGGAGGAAGAAGGAGA CGAGGACGAAGGCAAGGAGGAATGGATGGAGAAGGGGGAGATAACTGTGA CGGAGGAAGAGGAGGGAAAGAAGAAGGAGGAGGAAGTAGCTGCGACGTAG back to top
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