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Properties
| Property Name | Value |
|---|
| TranscriptId | 593636 |
| Track | FilteredModels2 |
| ProteinId | 593550 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:369821..371439 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6035 ID=mRNA_6035|Name=jgi.p|Nanoce1779_2|593550|organism=Nannochloropsis oceanica|type=mRNA|length=1469bp
ACAGGACTACTCGTCTCTACCACTATCATCCACTACCAACCAATACCATG
CGTTCCTTGAAGCCCTCCCTGATGTGCTCCCTGGCCCTGTTTGCGGCCGC
CGTCTTGGCTGACGAGGGTGATACCTCGGCTCCCACGCCCGTCCCGACCA
AGGCCGCTTACACGGGGCTTACGCTTTCTCCCACCGCGTCCCCTACGAAG
TCGGTCTACACGTCCCAGCCGACGTCTTCGATCGTGACGCTCGAGGCACC
GACGGTTGCCCCTACGGCAATTATCACGACTGCCCCTACTTCAGCTCCCA
CTGTAGCACCCACGGCCGCTCCTACTGCTGCTCCTACTGCTGCGCCTTCT
GCTGCTCCTACTGCTGCTCCTACTACAACCCCCACGGCCGCTCCTACGGC
TGCCCCAACGGTTGCCCCCACAGCCGCTCCTACGGCCGCTCCTACTGCTG
TACCTACTGCCGCTCCCACCGCTGCCCCCACGGTTGCTCCTACGGTTTCC
CCTACGGCGTCGCCCACCGAGATGATCTATACTCCTCCTCCCACCGCTGC
CCCCACACTGGCGCCAACAGCCACACCCACGGCGGCCCCGACAGCCTCGC
CCACGGTTGCTCCTACGGTTTCCCCTACGGCGTCGCCTACCGAGGTGATC
TATACTCCTCCTCCCACTACTGCCCCCACACTGGCGCCAACGGCTTCGCC
CACGGCGGCCCCGACAGCCTCGCCCACGGTTGCTCCTACGGCGGCGCCAA
CCACCACTCCTACCGCTGCCGCCACGGCAGCCCCTACTTCGATCCCTGAG
ATTTCTTGGGGCCCGCCCGAGCCGACCCAGACAATCACGCTTGCCCCAAC
GCCGTCACCGACCGAGAAATCCGTCTACTCTGCTCCCGCTTCAGAACCAA
ATGCGGTAGATGAACCGGTTGTGTACAGCCCTGCCAAGCCCTCTAGCCCC
GCTCCCACGGTGTTGCCCACGTCTGCGACAAACGGTCGTCATCTGCGCCG
AGGAAGCGCCTAGGTTAAGGAAAATGACTGCTTGGGTAACATGCCAGAGA
CATTGTGGCGGTGAGAAGACGAGCGTGAGTGGAAGAGGGAAAAAAGAGTG
AAGGGAATGAAGAAAAGGTTAAGAAGAGTGACGATAGAGAATATGGACTA
TACCTCTCCGTTCTTGCTACGGGTAGGAAGAGAAGAATCGACTCTGAACC
AAAGGGCTGAAGGGAAAAGTCTTTTTATGATGTACTAGTCAGAAGGATAG
GTATCTGGCGCCTTTTCGCGCCTGGAGGTGGGGATACTTAGATCGCATAG
CTCGCGCGCAATAAGATAAAGGCTACTGACAGGTACGGTGATCATAGATT
GACATGAAAAATACCCATGGAAAGACCTACATGTACAAGGGCATGGGGGG
AAATCAGGACCCCCCCTTAAAAAAAGTACCAAAATAGGATAATGCACATC
GCCGCAAGCGAAAAAGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|593550 >mRNA_6035-protein ID=mRNA_6035-protein|Name=jgi.p|Nanoce1779_2|593550|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MRSLKPSLMCSLALFAAAVLADEGDTSAPTPVPTKAAYTGLTLSPTASPT
KSVYTSQPTSSIVTLEAPTVAPTAIITTAPTSAPTVAPTAAPTAAPTAAP
SAAPTAAPTTTPTAAPTAAPTVAPTAAPTAAPTAVPTAAPTAAPTVAPTV
SPTASPTEMIYTPPPTAAPTLAPTATPTAAPTASPTVAPTVSPTASPTEV
IYTPPPTTAPTLAPTASPTAAPTASPTVAPTAAPTTTPTAAATAAPTSIP
EISWGPPEPTQTITLAPTPSPTEKSVYSAPASEPNAVDEPVVYSPAKPSS
PAPTVLPTSATNGRHLRRGSA* back to topmRNA from alignment at scaffold_14:369821..371439- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6035 ID=mRNA_6035|Name=jgi.p|Nanoce1779_2|593550|organism=Nannochloropsis oceanica|type=mRNA|length=1619bp|location=Sequence derived from alignment at scaffold_14:369821..371439- (Nannochloropsis oceanica)
ACAGGACTACTCGTCTCTACCACTATCATCCACTACCAACCAATACCATG
CGTTCCTTGAAGCCCTCCCTGATGTGCTCCCTGGCCCTGTTTGCGGCCGC
CGTCTTGGCTGACGAGGGTGATACCTCGGCTCCCACGCCCGTCCCGACCA
AGGCCGCTTACACGGGGCTTACGCTTTCTCCCACCGCGTCCCCTACGAAG
TCGGTCTACACGCCTCCTCCCACCGCCACCCCTACGGCTGCCCCGACAGA
GGATGTCTACACGTCCCAGCCGACGTCTTCGATCGTGACGCTCGAGGCAC
CGACGGTTGCCCCTACGGCAATTATCACGACTGCCCCTACTTCAGCTCCC
ACTGTAGCACCCACGGCCGCTCCTACTGCTGCTCCTACTGCTGCGCCTTC
TGCTGCTCCTACTGCTGCTCCTACTACAACCCCCACGGCCGCTCCTACGG
CTGCCCCAACGGTTGCCCCCACAGCCGCTCCTACGGCCGCTCCTACGGTT
GCCCCAACGGGTACGCCTACTGCTGTACCTACTGCCGCCCCCACTTCAAC
CCCCACGGTTGCTCCTACGGCTTTCCCGACAGCGGCGCCCACCGCGATGA
TCTATACTCCTCCTCCCACCGCTGCCCCCACGGTTGCTCCTACGGTTTCC
CCTACGGCGTCGCCCACCGAGATGATCTATACTCCTCCTCCCACCGCTGC
CCCCACACTGGCGCCAACAGCCACACCCACGGCGGCCCCGACAGCCTCGC
CCACGGTTGCTCCTACGGTTTCCCCTACGGCGTCGCCTACCGAGGTGATC
TATACTCCTCCTCCCACTACTGCCCCCACACTGGCGCCAACGGCTTCGCC
CACGGCGGCCCCGACAGCCTCGCCCACGGTTGCTCCTACGGCGGCGCCAA
CCACCACTCCTACCGCTGCCGCCACGGCAGCCCCTACTTCGATCCCTGAG
ATTTCTTGGGGCCCGCCCGAGCCGACCCAGACAATCACGCTTGCCCCAAC
GCCGTCACCGACCGAGAAATCCGTCTACTCTGCTCCCGCTTCAGAACCAA
ATGCGGTAGATGAACCGGTTGTGTACAGCCCTGCCAAGCCCTCTAGCCCC
GCTCCCACGGTGTTGCCCACGTCTGCGACAAACGGTCGTCATCTGCGCCG
AGGAAGCGCCTAGGTTAAGGAAAATGACTGCTTGGGTAACATGCCAGAGA
CATTGTGGCGGTGAGAAGACGAGCGTGAGTGGAAGAGGGAAAAAAGAGTG
AAGGGAATGAAGAAAAGGTTAAGAAGAGTGACGATAGAGAATATGGACTA
TACCTCTCCGTTCTTGCTACGGGTAGGAAGAGAAGAATCGACTCTGAACC
AAAGGGCTGAAGGGAAAAGTCTTTTTATGATGTACTAGTCAGAAGGATAG
GTATCTGGCGCCTTTTCGCGCCTGGAGGTGGGGATACTTAGATCGCATAG
CTCGCGCGCAATAAGATAAAGGCTACTGACAGGTACGGTGATCATAGATT
GACATGAAAAATACCCATGGAAAGACCTACATGTACAAGGGCATGGGGGG
AAATCAGGACCCCCCCTTAAAAAAAGTACCAAAATAGGATAATGCACATC
GCCGCAAGCGAAAAAGGAG back to topCoding sequence (CDS) from alignment at scaffold_14:369821..371439- >mRNA_6035 ID=mRNA_6035|Name=jgi.p|Nanoce1779_2|593550|organism=Nannochloropsis oceanica|type=CDS|length=3864bp|location=Sequence derived from alignment at scaffold_14:369821..371439- (Nannochloropsis oceanica)
CTCCCACCGCTGCCCCCACGGTTGCTCCTACGGTTTCCCCTACGGCGTCG
CCCACCGAGATGATCTATACTCCTCCTCCCACCGCTGCCCCCACACTGGC
GCCAACAGCCACACCCACGGCGGCCCCGACAGCCTCGCCCACGGTTGCTC
CTACGGTTTCCCCTACGGCGTCGCCTACCGAGGTGATCTATACTCCTCCT
CCCACTACTGCCCCCACACTGGCGCCAACGGCTTCGCCCACGGCGGCCCC
GACAGCCTCGCCCACGGTTGCTCCTACGGCGGCGCCAACCACCACTCCTA
CCGCTGCCGCCACGGCAGCCCCTACTTCGATCCCTGAGATTTCTTGGGGC
CCGCCCGAGCCGACCCAGACAATCACGCTTGCCCCAACGCCGTCACCGAC
CGAGAAATCCGTCTACTCTGCTCCCGCTTCAGAACCAAATGCGGTAGATG
AACCGGTTGTGTACAGCCCTGCCAAGCCCTCTAGCCCCGCTCCCACGGTG
TTGCCCACGTCTGCGACAAACGGTCGTCATCTGCGCCGAGGAAGCGCCTA
GCTACTGCTGTACCTACTGCCGGTCTACACGTCCCAGCCGACGTCTTCGA
TCGTGACGCTCGAGGCACCGACGGTTGCCCCTACGGCAATTATCACGACT
GCCCCTACTTCAGCTCCCACTGTAGCACCCACGGCCGCTCCTACTGCTGC
TCCTACTGCTGCGCCTTCTGCTGCTCCTACTGCTGCTCCTACTACAACCC
CCACGGCCGCTCCTACGGCTGCCCCAACGGTTGCCCCCACAGCCGCTCCT
ACGGCCGCTCATGCGTTCCTTGAAGCCCTCCCTGATGTGCTCCCTGGCCC
TGTTTGCGGCCGCCGTCTTGGCTGACGAGGGTGATACCTCGGCTCCCACG
CCCGTCCCGACCAAGGCCGCTTACACGGGGCTTACGCTTTCTCCCACCGC
GTCCCCTACGAAGTCGCTCCCACCGCTGCCCCCACGGTTGCTCCTACGGT
TTCCCCTACGGCGTCGCCCACCGAGATGATCTATACTCCTCCTCCCACCG
CTGCCCCCACACTGGCGCCAACAGCCACACCCACGGCGGCCCCGACAGCC
TCGCCCACGGTTGCTCCTACGGTTTCCCCTACGGCGTCGCCTACCGAGGT
GATCTATACTCCTCCTCCCACTACTGCCCCCACACTGGCGCCAACGGCTT
CGCCCACGGCGGCCCCGACAGCCTCGCCCACGGTTGCTCCTACGGCGGCG
CCAACCACCACTCCTACCGCTGCCGCCACGGCAGCCCCTACTTCGATCCC
TGAGATTTCTTGGGGCCCGCCCGAGCCGACCCAGACAATCACGCTTGCCC
CAACGCCGTCACCGACCGAGAAATCCGTCTACTCTGCTCCCGCTTCAGAA
CCAAATGCGGTAGATGAACCGGTTGTGTACAGCCCTGCCAAGCCCTCTAG
CCCCGCTCCCACGGTGTTGCCCACGTCTGCGACAAACGGTCGTCATCTGC
GCCGAGGAAGCGCCTAGCTACTGCTGTACCTACTGCCGGTCTACACGTCC
CAGCCGACGTCTTCGATCGTGACGCTCGAGGCACCGACGGTTGCCCCTAC
GGCAATTATCACGACTGCCCCTACTTCAGCTCCCACTGTAGCACCCACGG
CCGCTCCTACTGCTGCTCCTACTGCTGCGCCTTCTGCTGCTCCTACTGCT
GCTCCTACTACAACCCCCACGGCCGCTCCTACGGCTGCCCCAACGGTTGC
CCCCACAGCCGCTCCTACGGCCGCTCATGCGTTCCTTGAAGCCCTCCCTG
ATGTGCTCCCTGGCCCTGTTTGCGGCCGCCGTCTTGGCTGACGAGGGTGA
TACCTCGGCTCCCACGCCCGTCCCGACCAAGGCCGCTTACACGGGGCTTA
CGCTTTCTCCCACCGCGTCCCCTACGAAGTCGCTCCCACCGCTGCCCCCA
CGGTTGCTCCTACGGTTTCCCCTACGGCGTCGCCCACCGAGATGATCTAT
ACTCCTCCTCCCACCGCTGCCCCCACACTGGCGCCAACAGCCACACCCAC
GGCGGCCCCGACAGCCTCGCCCACGGTTGCTCCTACGGTTTCCCCTACGG
CGTCGCCTACCGAGGTGATCTATACTCCTCCTCCCACTACTGCCCCCACA
CTGGCGCCAACGGCTTCGCCCACGGCGGCCCCGACAGCCTCGCCCACGGT
TGCTCCTACGGCGGCGCCAACCACCACTCCTACCGCTGCCGCCACGGCAG
CCCCTACTTCGATCCCTGAGATTTCTTGGGGCCCGCCCGAGCCGACCCAG
ACAATCACGCTTGCCCCAACGCCGTCACCGACCGAGAAATCCGTCTACTC
TGCTCCCGCTTCAGAACCAAATGCGGTAGATGAACCGGTTGTGTACAGCC
CTGCCAAGCCCTCTAGCCCCGCTCCCACGGTGTTGCCCACGTCTGCGACA
AACGGTCGTCATCTGCGCCGAGGAAGCGCCTAGCTACTGCTGTACCTACT
GCCGGTCTACACGTCCCAGCCGACGTCTTCGATCGTGACGCTCGAGGCAC
CGACGGTTGCCCCTACGGCAATTATCACGACTGCCCCTACTTCAGCTCCC
ACTGTAGCACCCACGGCCGCTCCTACTGCTGCTCCTACTGCTGCGCCTTC
TGCTGCTCCTACTGCTGCTCCTACTACAACCCCCACGGCCGCTCCTACGG
CTGCCCCAACGGTTGCCCCCACAGCCGCTCCTACGGCCGCTCATGCGTTC
CTTGAAGCCCTCCCTGATGTGCTCCCTGGCCCTGTTTGCGGCCGCCGTCT
TGGCTGACGAGGGTGATACCTCGGCTCCCACGCCCGTCCCGACCAAGGCC
GCTTACACGGGGCTTACGCTTTCTCCCACCGCGTCCCCTACGAAGTCGCT
CCCACCGCTGCCCCCACGGTTGCTCCTACGGTTTCCCCTACGGCGTCGCC
CACCGAGATGATCTATACTCCTCCTCCCACCGCTGCCCCCACACTGGCGC
CAACAGCCACACCCACGGCGGCCCCGACAGCCTCGCCCACGGTTGCTCCT
ACGGTTTCCCCTACGGCGTCGCCTACCGAGGTGATCTATACTCCTCCTCC
CACTACTGCCCCCACACTGGCGCCAACGGCTTCGCCCACGGCGGCCCCGA
CAGCCTCGCCCACGGTTGCTCCTACGGCGGCGCCAACCACCACTCCTACC
GCTGCCGCCACGGCAGCCCCTACTTCGATCCCTGAGATTTCTTGGGGCCC
GCCCGAGCCGACCCAGACAATCACGCTTGCCCCAACGCCGTCACCGACCG
AGAAATCCGTCTACTCTGCTCCCGCTTCAGAACCAAATGCGGTAGATGAA
CCGGTTGTGTACAGCCCTGCCAAGCCCTCTAGCCCCGCTCCCACGGTGTT
GCCCACGTCTGCGACAAACGGTCGTCATCTGCGCCGAGGAAGCGCCTAGC
TACTGCTGTACCTACTGCCGGTCTACACGTCCCAGCCGACGTCTTCGATC
GTGACGCTCGAGGCACCGACGGTTGCCCCTACGGCAATTATCACGACTGC
CCCTACTTCAGCTCCCACTGTAGCACCCACGGCCGCTCCTACTGCTGCTC
CTACTGCTGCGCCTTCTGCTGCTCCTACTGCTGCTCCTACTACAACCCCC
ACGGCCGCTCCTACGGCTGCCCCAACGGTTGCCCCCACAGCCGCTCCTAC
GGCCGCTCATGCGTTCCTTGAAGCCCTCCCTGATGTGCTCCCTGGCCCTG
TTTGCGGCCGCCGTCTTGGCTGACGAGGGTGATACCTCGGCTCCCACGCC
CGTCCCGACCAAGGCCGCTTACACGGGGCTTACGCTTTCTCCCACCGCGT
CCCCTACGAAGTCG back to top
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