jgi.p|Nanoce1779_2|631588, mRNA_7010 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|631588
Unique NamemRNA_7010
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length846
Alignment locationscaffold_16:44069..44914 +

Link to JBrowse

Properties
Property NameValue
TranscriptId631674
TrackFilteredModels2
ProteinId631588
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:44069..44914 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631588gene_7010Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631588mRNA_7010-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7010CDS_7010Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7010 ID=mRNA_7010|Name=jgi.p|Nanoce1779_2|631588|organism=Nannochloropsis oceanica|type=mRNA|length=846bp
ATGGACGACGGGCGAGAACTGAGTGTGGATGCATACTGGAGGGCGAGGGA
GGGAGGGAGAGAGGGGGGGAGGAAGAGGTGGGTGGAGAAGGTGGAAGAGG
AGAAGGGGGAAGGGGGGGAGGAGGAGTGGGGGGAGGGGGAGGGGGAGGAT
GACGAGGAGAGTGTCCTGACTGTCAGCAGTATAGGGGAGGAAGGGGAGGA
GGGAACGGAAGTGCAACAGCAGCATGTTGGGAAGGGAGGGAGTGAGGGAG
GGAAGAAAGAGGCGGAGGATGACAAGGAGAAGGAGGCAAAGCACCTGGTT
GAGCAGGAAGAGGGCCAGCATCAAGTGCGGGAGCAGCAGCATTTTGAGGG
GGGAGGAGGGAAGGGAGGAGATGAGGAGACGAAAAACAATAAGGAGGAAG
GAAGACAACATCAAGTGCAGGAGGAGGAAGAGGGCGGGGGAAGGGAGAGG
GAGGGACCAGGAGGACGGCAGGCGGAATCGAAGGACGGAGAATCAGAGGA
GGGGAAAGAGGAAGAGGAAGAGCAAACTAGGAAGTGCGAGGACGAGGATA
GGGTGGATACGGTCTTTCTCGAAGCTATGTCAGGCAAGGAGAAAGGAGGA
GAGAAAGAGAGGGAAACGGAGGAGGAGGGAGAGGGAGGGAGGGAGGATGG
GAAGGAGAAAGAGGCGAGAGTGGAGGAGGGGGGACAAGCGGAGGGGCTTA
AGGATGAAATGGATGGCCTGGCCGAGTTGTTGCAAGCAGGAACACTGATG
GATGTGGACGAGGGAGGAGAGGAGGAGATGGTCGAGGGGGAGGAGGGGGT
TGAAGCCATGCTGCATGATGATGGGGCCTTTGCGTTCAGGACATGA
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protein sequence of jgi.p|Nanoce1779_2|631588

>mRNA_7010-protein ID=mRNA_7010-protein|Name=jgi.p|Nanoce1779_2|631588|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MDDGRELSVDAYWRAREGGREGGRKRWVEKVEEEKGEGGEEEWGEGEGED
DEESVLTVSSIGEEGEEGTEVQQQHVGKGGSEGGKKEAEDDKEKEAKHLV
EQEEGQHQVREQQHFEGGGGKGGDEETKNNKEEGRQHQVQEEEEGGGRER
EGPGGRQAESKDGESEEGKEEEEEQTRKCEDEDRVDTVFLEAMSGKEKGG
EKERETEEEGEGGREDGKEKEARVEEGGQAEGLKDEMDGLAELLQAGTLM
DVDEGGEEEMVEGEEGVEAMLHDDGAFAFRT*
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mRNA from alignment at scaffold_16:44069..44914+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7010 ID=mRNA_7010|Name=jgi.p|Nanoce1779_2|631588|organism=Nannochloropsis oceanica|type=mRNA|length=846bp|location=Sequence derived from alignment at scaffold_16:44069..44914+ (Nannochloropsis oceanica)
ATGGACGACGGGCGAGAACTGAGTGTGGATGCATACTGGAGGGCGAGGGA
GGGAGGGAGAGAGGGGGGGAGGAAGAGGTGGGTGGAGAAGGTGGAAGAGG
AGAAGGGGGAAGGGGGGGAGGAGGAGTGGGGGGAGGGGGAGGGGGAGGAT
GACGAGGAGAGTGTCCTGACTGTCAGCAGTATAGGGGAGGAAGGGGAGGA
GGGAACGGAAGTGCAACAGCAGCATGTTGGGAAGGGAGGGAGTGAGGGAG
GGAAGAAAGAGGCGGAGGATGACAAGGAGAAGGAGGCAAAGCACCTGGTT
GAGCAGGAAGAGGGCCAGCATCAAGTGCGGGAGCAGCAGCATTTTGAGGG
GGGAGGAGGGAAGGGAGGAGATGAGGAGACGAAAAACAATAAGGAGGAAG
GAAGACAACATCAAGTGCAGGAGGAGGAAGAGGGCGGGGGAAGGGAGAGG
GAGGGACCAGGAGGACGGCAGGCGGAATCGAAGGACGGAGAATCAGAGGA
GGGGAAAGAGGAAGAGGAAGAGCAAACTAGGAAGTGCGAGGACGAGGATA
GGGTGGATACGGTCTTTCTCGAAGCTATGTCAGGCAAGGAGAAAGGAGGA
GAGAAAGAGAGGGAAACGGAGGAGGAGGGAGAGGGAGGGAGGGAGGATGG
GAAGGAGAAAGAGGCGAGAGTGGAGGAGGGGGGACAAGCGGAGGGGCTTA
AGGATGAAATGGATGGCCTGGCCGAGTTGTTGCAAGCAGGAACACTGATG
GATGTGGACGAGGGAGGAGAGGAGGAGATGGTCGAGGGGGAGGAGGGGGT
TGAAGCCATGCTGCATGATGATGGGGCCTTTGCGTTCAGGACATGA
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Coding sequence (CDS) from alignment at scaffold_16:44069..44914+

>mRNA_7010 ID=mRNA_7010|Name=jgi.p|Nanoce1779_2|631588|organism=Nannochloropsis oceanica|type=CDS|length=846bp|location=Sequence derived from alignment at scaffold_16:44069..44914+ (Nannochloropsis oceanica)
ATGGACGACGGGCGAGAACTGAGTGTGGATGCATACTGGAGGGCGAGGGA
GGGAGGGAGAGAGGGGGGGAGGAAGAGGTGGGTGGAGAAGGTGGAAGAGG
AGAAGGGGGAAGGGGGGGAGGAGGAGTGGGGGGAGGGGGAGGGGGAGGAT
GACGAGGAGAGTGTCCTGACTGTCAGCAGTATAGGGGAGGAAGGGGAGGA
GGGAACGGAAGTGCAACAGCAGCATGTTGGGAAGGGAGGGAGTGAGGGAG
GGAAGAAAGAGGCGGAGGATGACAAGGAGAAGGAGGCAAAGCACCTGGTT
GAGCAGGAAGAGGGCCAGCATCAAGTGCGGGAGCAGCAGCATTTTGAGGG
GGGAGGAGGGAAGGGAGGAGATGAGGAGACGAAAAACAATAAGGAGGAAG
GAAGACAACATCAAGTGCAGGAGGAGGAAGAGGGCGGGGGAAGGGAGAGG
GAGGGACCAGGAGGACGGCAGGCGGAATCGAAGGACGGAGAATCAGAGGA
GGGGAAAGAGGAAGAGGAAGAGCAAACTAGGAAGTGCGAGGACGAGGATA
GGGTGGATACGGTCTTTCTCGAAGCTATGTCAGGCAAGGAGAAAGGAGGA
GAGAAAGAGAGGGAAACGGAGGAGGAGGGAGAGGGAGGGAGGGAGGATGG
GAAGGAGAAAGAGGCGAGAGTGGAGGAGGGGGGACAAGCGGAGGGGCTTA
AGGATGAAATGGATGGCCTGGCCGAGTTGTTGCAAGCAGGAACACTGATG
GATGTGGACGAGGGAGGAGAGGAGGAGATGGTCGAGGGGGAGGAGGGGGT
TGAAGCCATGCTGCATGATGATGGGGCCTTTGCGTTCAGGACATGA
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Synonyms
Publications