Properties
| Property Name | Value |
|---|
| TranscriptId | 597589 |
| Track | FilteredModels2 |
| ProteinId | 597503 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:296910..298469 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6621 ID=mRNA_6621|Name=jgi.p|Nanoce1779_2|597503|organism=Nannochloropsis oceanica|type=mRNA|length=1560bp
ACAGACTCTCCTCTTTCACGCTGCAGCTATGCCGCTCGAGACCACCATCG
TCTGCGTGGACAACAGCGACTGGACGCGCAACGGGGACTACATCCCTACG
CGTTTCGAGGCGCAACATGATGCTGTGAATCTGGTAACCGGGGCCAAGAC
GCAACAAAACCCTGAAAGCACCGTAGGTGTCCTTACCATGGCCGGACGGG
GTGTCGAGCTCCTCGTCTCCCCCACCGACGACATTGGCAAGCTACTCTCG
TGCCTACATGGGGTGAAGGTAGGTGGTAAGTCGGACATGGCGGGAGCTGT
GCAAGTAGCGCAGCTGGCGCTAAAGCACCGGCGGAACAAGAATGGTGGGC
AGCGGGTTGTGGTGTTTGTGGGGAGTCCGTTGGAGGCCGATGCTAAGATA
TTGGTGAAAGTAGGCAAACAGTTGAAGAAGAATGGTATTGCTGTGGACGT
GGTGAGCTTGGGTGAGATTGAAGAGAACCAGGAGAAGCTGCAGGAGTTCG
TGGAGGCTACCAACAGTAATAACAATTCGCATTTGGTTACCATTCCTCCG
GGGCTCTTGCCTTCCGACGTGCTTGTCACCTCCCCCATCATCCATGGCGG
GGAGGAAGGTGGCGGCGGAGGAGGAGGAATGGGTGCAGGCGAGGGAGGAG
GAGGAGGTGGGTTTGGCATGGGTGCGGGTATGGGTGATTTTGGGGGCGTG
GATGCTCAGAACGATCCCGCGTTGGCGATGGCTTTGCGGGTGTCATACGA
GGAGGAGAGGGCGAGGCAGGAGGCGGCAGCAAAAGAAGCAGCAGTAGCGG
AGGGTGAAGGAGGGAAGGGAGAGGCAAAGGTACGGCATTACTTTGGTGTG
ATGGAGGGATGGCGGGATGGATAGGAGAAGACAGAAGGACAGGGTTTAGT
ATGTTTTCTTTTTGTTCATGTGTGTTTAGGTCACTATGGCCACTAGTATG
TTATGGAAGCTGTATGCAATTGTCAAGATGATATATGTTTGGTTTTCTTG
TCCTCAATCTCATTTGCCTTTGCCCTCTCAACCCGCAAACTAACAGGCTA
CTGGCATGGAGACAGATGCCGGGGCCTCCTCCGCCGCAGCTGCTGCCGCA
ACAGCGGCCTCGATGGGTAGTGATATGGACGACGACGAAGAAGCCTTACT
GAAACAAGCTCTGGCCATGTCCATGGCTGACACAGGGAGCAGCAGCAGCG
TTGCCGGTGGTGCTGGTGGAGAGGGTGGGGGGAGTACAAGCAGCAGTAGT
GGTGATGAGGCTCCAATGGAGGAGGATGAAGACGCAGCGTATCAGCTAGC
GCTAAAGATGTCAATGGATGAAGATAGTGGTGGTAATGGTGGTGGAGAGA
GCACTAGCGCCCCTGCTGCCCTGCCTACGGAGGCTGTAGCAGCAGGAGGA
AGTGCGCCGGCTCCTACATTCGCCGACCCGGAGTTTGTGATGAACTTGTT
AGGTTCTTTGGAGGGTGTGGATCCGAACGATCCTACCATTCGTGCAACAC
TGGAGTCTATGGGAATTAAGCCGCCGGGGGAGAATGAAGATGAGAAGAAG
GATGGGGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|597503 >mRNA_6621-protein ID=mRNA_6621-protein|Name=jgi.p|Nanoce1779_2|597503|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MPLETTIVCVDNSDWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVG
VLTMAGRGVELLVSPTDDIGKLLSCLHGVKVGGKSDMAGAVQVAQLALKH
RRNKNGGQRVVVFVGSPLEADAKILVKVGKQLKKNGIAVDVVSLGEIEEN
QEKLQEFVEATNSNNNSHLVTIPPGLLPSDVLVTSPIIHGGEEGGGGGGG
MGAGEGGGGGGFGMGAGMGDFGGVDAQNDPALAMALRVSYEEERARQEAA
AKEAAVAEGEGGKGEAKVRHYFGVMEGWRDG* back to topmRNA from alignment at scaffold_18:296910..298469- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6621 ID=mRNA_6621|Name=jgi.p|Nanoce1779_2|597503|organism=Nannochloropsis oceanica|type=mRNA|length=1560bp|location=Sequence derived from alignment at scaffold_18:296910..298469- (Nannochloropsis oceanica)
ACAGACTCTCCTCTTTCACGCTGCAGCTATGCCGCTCGAGACCACCATCG
TCTGCGTGGACAACAGCGACTGGACGCGCAACGGGGACTACATCCCTACG
CGTTTCGAGGCGCAACATGATGCTGTGAATCTGGTAACCGGGGCCAAGAC
GCAACAAAACCCTGAAAGCACCGTAGGTGTCCTTACCATGGCCGGACGGG
GTGTCGAGCTCCTCGTCTCCCCCACCGACGACATTGGCAAGCTACTCTCG
TGCCTACATGGGGTGAAGGTAGGTGGTAAGTCGGACATGGCGGGAGCTGT
GCAAGTAGCGCAGCTGGCGCTAAAGCACCGGCGGAACAAGAATGGTGGGC
AGCGGGTTGTGGTGTTTGTGGGGAGTCCGTTGGAGGCCGATGCTAAGATA
TTGGTGAAAGTAGGCAAACAGTTGAAGAAGAATGGTATTGCTGTGGACGT
GGTGAGCTTGGGTGAGATTGAAGAGAACCAGGAGAAGCTGCAGGAGTTCG
TGGAGGCTACCAACAGTAATAACAATTCGCATTTGGTTACCATTCCTCCG
GGGCTCTTGCCTTCCGACGTGCTTGTCACCTCCCCCATCATCCATGGCGG
GGAGGAAGGTGGCGGCGGAGGAGGAGGAATGGGTGCAGGCGAGGGAGGAG
GAGGAGGTGGGTTTGGCATGGGTGCGGGTATGGGTGATTTTGGGGGCGTG
GATGCTCAGAACGATCCCGCGTTGGCGATGGCTTTGCGGGTGTCATACGA
GGAGGAGAGGGCGAGGCAGGAGGCGGCAGCAAAAGAAGCAGCAGTAGCGG
AGGGTGAAGGAGGGAAGGGAGAGGCAAAGGTACGGCATTACTTTGGTGTG
ATGGAGGGATGGCGGGATGGATAGGAGAAGACAGAAGGACAGGGTTTAGT
ATGTTTTCTTTTTGTTCATGTGTGTTTAGGTCACTATGGCCACTAGTATG
TTATGGAAGCTGTATGCAATTGTCAAGATGATATATGTTTGGTTTTCTTG
TCCTCAATCTCATTTGCCTTTGCCCTCTCAACCCGCAAACTAACAGGCTA
CTGGCATGGAGACAGATGCCGGGGCCTCCTCCGCCGCAGCTGCTGCCGCA
ACAGCGGCCTCGATGGGTAGTGATATGGACGACGACGAAGAAGCCTTACT
GAAACAAGCTCTGGCCATGTCCATGGCTGACACAGGGAGCAGCAGCAGCG
TTGCCGGTGGTGCTGGTGGAGAGGGTGGGGGGAGTACAAGCAGCAGTAGT
GGTGATGAGGCTCCAATGGAGGAGGATGAAGACGCAGCGTATCAGCTAGC
GCTAAAGATGTCAATGGATGAAGATAGTGGTGGTAATGGTGGTGGAGAGA
GCACTAGCGCCCCTGCTGCCCTGCCTACGGAGGCTGTAGCAGCAGGAGGA
AGTGCGCCGGCTCCTACATTCGCCGACCCGGAGTTTGTGATGAACTTGTT
AGGTTCTTTGGAGGGTGTGGATCCGAACGATCCTACCATTCGTGCAACAC
TGGAGTCTATGGGAATTAAGCCGCCGGGGGAGAATGAAGATGAGAAGAAG
GATGGGGAGG back to topCoding sequence (CDS) from alignment at scaffold_18:296910..298469- >mRNA_6621 ID=mRNA_6621|Name=jgi.p|Nanoce1779_2|597503|organism=Nannochloropsis oceanica|type=CDS|length=846bp|location=Sequence derived from alignment at scaffold_18:296910..298469- (Nannochloropsis oceanica)
ATGCCGCTCGAGACCACCATCGTCTGCGTGGACAACAGCGACTGGACGCG
CAACGGGGACTACATCCCTACGCGTTTCGAGGCGCAACATGATGCTGTGA
ATCTGGTAACCGGGGCCAAGACGCAACAAAACCCTGAAAGCACCGTAGGT
GTCCTTACCATGGCCGGACGGGGTGTCGAGCTCCTCGTCTCCCCCACCGA
CGACATTGGCAAGCTACTCTCGTGCCTACATGGGGTGAAGGTAGGTGGTA
AGTCGGACATGGCGGGAGCTGTGCAAGTAGCGCAGCTGGCGCTAAAGCAC
CGGCGGAACAAGAATGGTGGGCAGCGGGTTGTGGTGTTTGTGGGGAGTCC
GTTGGAGGCCGATGCTAAGATATTGGTGAAAGTAGGCAAACAGTTGAAGA
AGAATGGTATTGCTGTGGACGTGGTGAGCTTGGGTGAGATTGAAGAGAAC
CAGGAGAAGCTGCAGGAGTTCGTGGAGGCTACCAACAGTAATAACAATTC
GCATTTGGTTACCATTCCTCCGGGGCTCTTGCCTTCCGACGTGCTTGTCA
CCTCCCCCATCATCCATGGCGGGGAGGAAGGTGGCGGCGGAGGAGGAGGA
ATGGGTGCAGGCGAGGGAGGAGGAGGAGGTGGGTTTGGCATGGGTGCGGG
TATGGGTGATTTTGGGGGCGTGGATGCTCAGAACGATCCCGCGTTGGCGA
TGGCTTTGCGGGTGTCATACGAGGAGGAGAGGGCGAGGCAGGAGGCGGCA
GCAAAAGAAGCAGCAGTAGCGGAGGGTGAAGGAGGGAAGGGAGAGGCAAA
GGTACGGCATTACTTTGGTGTGATGGAGGGATGGCGGGATGGATAG back to top
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