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Properties
| Property Name | Value |
|---|
| TranscriptId | 633070 |
| Track | FilteredModels2 |
| ProteinId | 632984 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:177283..178677 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8550 ID=mRNA_8550|Name=jgi.p|Nanoce1779_2|632984|organism=Nannochloropsis oceanica|type=mRNA|length=909bp
AGGAGTCGACCAGCCGGCCAACGAGCTAACCCTGACAAGAGCGCCCGCGC
GGGTGAGGCAAAACGAGAAGGCAAGGCCACCACTCGGCCCTTCTTCAGCA
ACACACCCGTACTTGTCAGTCCACAAAATATGTACAACGGCATTGGGTTG
GCGACCGCCCGTGGCTCGGCCACGAGTGGATATGTGACCAAGAATCGTGG
GTATGTTCCTCCGCGGCGGATCAGGCAAGAGACGGCCTTGGTGAGTGGGC
GGGGAGGCCCTCAAGACACGTTTAAGGCTGCTGTGCTAGCCAAGGCAAAT
CAGGAGATATTGGAGCACAAGCGCAAACGGCAAATCGAGGCGCAAGTGTA
CGAGCTTCAAGAGAATATGCGAGATCAGGGGTACACGGACGTGGAGATTG
AGGGCAAGGCTAAGACATTACGAGAACAATTGGAGCGTAATACCTCGGCG
TTGGTACCTGCGAAAAAAAAGGGTGGAGGTGCCATGACAGACACCCATGA
AGTAGCCGCACGCAAGGCGGAAGAGAATGAGAAGCTGCGTCATGCGTTCG
GCATTGCAAAGGACCATGTGGAAGGGGAGACTTGGGATCCGGAGGCCCGA
GATAGACGGAGACAGGATAGGGATAAGGAGAGGGCAGAGAAGAGGGAGAG
GAGGGGGGCTGAGGAGAAGGAGCGGAAGGAGCGCAGGGAGAGGTTCGAGA
AGGAGGCAAAAGAGGAAGAGGAGAAGCGGCGGGCGGAGGAGAATCGCCGT
AGACTCGGCAGTGGGGGAGGCAGGGGGGGCAAGCTGGGCTGGAAGAAAGA
GGATGAAGAGGATGATAGGTGGCGGCCTGAGAACGAGGGAGAGGAAGAAG
AGTTTGAGGAGAAAGAAAAAGGCTCTTCCTCCTCGTCTGATTCGTCCGAC
TCCGAGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|632984 >mRNA_8550-protein ID=mRNA_8550-protein|Name=jgi.p|Nanoce1779_2|632984|organism=Nannochloropsis oceanica|type=polypeptide|length=260bp
MYNGIGLATARGSATSGYVTKNRGYVPPRRIRQETALVSGRGGPQDTFKA
AVLAKANQEILEHKRKRQIEAQVYELQENMRDQGYTDVEIEGKAKTLREQ
LERNTSALVPAKKKGGGAMTDTHEVAARKAEENEKLRHAFGIAKDHVEGE
TWDPEARDRRRQDRDKERAEKRERRGAEEKERKERRERFEKEAKEEEEKR
RAEENRRRLGSGGGRGGKLGWKKEDEEDDRWRPENEGEEEEFEEKEKGSS
SSSDSSDSE* back to topmRNA from alignment at scaffold_26:177283..178677+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8550 ID=mRNA_8550|Name=jgi.p|Nanoce1779_2|632984|organism=Nannochloropsis oceanica|type=mRNA|length=1395bp|location=Sequence derived from alignment at scaffold_26:177283..178677+ (Nannochloropsis oceanica)
AGGAGTCGACCAGCCGGCCAACGAGCTAACCCTGACAAGAGCGCCCGCGC
GGGTGAGGCAAAACGAGAAGGCAAGGCCACCACTCGGCCCTTCTTCAGCA
ACACACCCGTACTTGTCAGTCCACAAAATATGTACAACGGCATTGGGTTG
GCGACCGCCCGTGGCTCGGCCACGAGTGGATATGTGACCAAGAATCGTGG
GTATGTTCCTCCGCGGCGGATCAGGCAAGAGACGGCCTTGGTGAGTGGGC
GGGGAGGCCCTCAAGACACGTTTAAGGCTGCTGTGCTAGCCAAGGCAAAT
CAGGAGATATTGGAGCACAAGCGCAAACGGCAAATCGAGGCGCAAGTGTA
CGAGCTTCAAGAGAATATGCGAGATCAGGGGTACACGGACGTGGAGATTG
AGGGCAAGGCTAAGACATTACGAGAACAATTGGAGCGTAATACCTCGGCG
TTGGTACCTGCGAAAAAAAAGGGTGGAGGTGCCATGACAGACACCCATGA
AGTAGCCGCACGCAAGGCGGAAGAGAATGAGAAGCTGCGTCATGCGTTCG
GCATTGCAAAGGACCATGTGGAAGGGGAGACTTGGGATCCGGAGGCCCGA
GATAGACGGAGACAGGATAGGGATAAGGAGAGGGCAGAGAAGAGGGAGAG
GAGGGGGGCTGAGGAGAAGGAGCGGAAGGAGCGCAGGGAGAGGTTCGAGA
AGGAGGCAAAAGAGGAAGAGGAGAAGCGGCGGGCGGAGGAGAATCGCCGT
AGACTCGGCAGTGGGGGAGGCAGGGGGGGCAAGCTGGGCTGGAAGAAAGA
GGATGAAGAGGATGATAGGTGGCGGCCTGAGAACGAGGGAGAGGAAGAAG
AGTTTGAGGAGAAAGAAAAAGGTAGAAGTGGGAGAGGGATGAAGAGACAT
TGGAAAGAGGATGATTTTGCAGGGAAGAATCGTAGCCGAAGCCGCAGTCG
AGGAAGAGCACGACGAGGAGAAGGAAGGGATGGAGGGAAGGAAAGAGAGG
TTGACAGACGCCAGGAGACGGCGGATGAGAAGGGGAGAAAGGGGGAAAAG
GCCATTGTTACCACCACCAGCAATAGCAGCAGCAGCAACAGCAGCAGCAT
GGCGGTTGCTGGTCGCAAGAAGACGAAGGATGGCGGGAACGAGAGGGAGA
AAGAGGGAAAGAAGAGACCACAAGGAGCAGGCAGCACCAGAAGCAGCAGA
CGAGGCCATCGGTACTCCCGCAGCCTCAGCAGCGACTCCTCATCCTCCTC
ATCCTCCTCATCTTCTTCTTCATCCTCATCTTCATCTTCGTTTTCTGATT
CGAGCTCTTCGAGCAGCAGCAGCGGCAATTCCTCTTCGTCCTCGTCCTCT
TCCTCAGGCTCTTCCTCCTCGTCTGATTCGTCCGACTCCGAGTAG back to topCoding sequence (CDS) from alignment at scaffold_26:177283..178677+ >mRNA_8550 ID=mRNA_8550|Name=jgi.p|Nanoce1779_2|632984|organism=Nannochloropsis oceanica|type=CDS|length=1560bp|location=Sequence derived from alignment at scaffold_26:177283..178677+ (Nannochloropsis oceanica)
ATGTACAACGGCATTGGGTTGGCGACCGCCCGTGGCTCGGCCACGAGTGG
ATATGTGACCAAGAATCGTGGGTATGTTCCTCCGCGGCGGATCAGGCAAG
AGACGGCCTTGGTGAGTGGGCGGGGAGGCCCTCAAGACACGTTTAAGGCT
GCTGTGCTAGCCAAGGCAAATCAGGAGATATTGGAGCACAAGCGCAAACG
GCAAATCGAGGCGCAAGTGTACGAGCTTCAAGAGAATATGCGAGATCAGG
GGTACACGGACGTGGAGATTGAGGGCAAGGCTAAGACATTACGAGAACAA
TTGGAGCGTAATACCTCGGCGTTGGTACCTGCGAAAAAAAAGGGTGGAGG
TGCCATGACAGACACCCATGAAGTAGCCGCACGCAAGGCGGAAGAGAATG
AGAAGCTGCGTCATGCGTTCGGCATTGCAAAGGACCATGTGGAAGGGGAG
ACTTGGGATCCGGAGGCCCGAGATAGACGGAGACAGGATAGGGATAAGGA
GAGGGCAGAGAAGAGGGAGAGGAGGGGGGCTGAGGAGAAGGAGCGGAAGG
AGCGCAGGGAGAGGTTCGAGAAGGAGGCAAAAGAGGAAGAGGAGAAGCGG
CGGGCGGAGGAGAATCGCCGTAGACTCGGCAGTGGGGGAGGCAGGGGGGG
CAAGCTGGGCTGGAAGAAAGAGGATGAAGAGGATGATAGGTGGCGGCCTG
AGAACGAGGGAGAGGAAGAAGAGTTTGAGGAGAAAGAAAAAGGCTCTTCC
TCCTCGTCTGATTCGTCCGACTCCGAGTAGATGTACAACGGCATTGGGTT
GGCGACCGCCCGTGGCTCGGCCACGAGTGGATATGTGACCAAGAATCGTG
GGTATGTTCCTCCGCGGCGGATCAGGCAAGAGACGGCCTTGGTGAGTGGG
CGGGGAGGCCCTCAAGACACGTTTAAGGCTGCTGTGCTAGCCAAGGCAAA
TCAGGAGATATTGGAGCACAAGCGCAAACGGCAAATCGAGGCGCAAGTGT
ACGAGCTTCAAGAGAATATGCGAGATCAGGGGTACACGGACGTGGAGATT
GAGGGCAAGGCTAAGACATTACGAGAACAATTGGAGCGTAATACCTCGGC
GTTGGTACCTGCGAAAAAAAAGGGTGGAGGTGCCATGACAGACACCCATG
AAGTAGCCGCACGCAAGGCGGAAGAGAATGAGAAGCTGCGTCATGCGTTC
GGCATTGCAAAGGACCATGTGGAAGGGGAGACTTGGGATCCGGAGGCCCG
AGATAGACGGAGACAGGATAGGGATAAGGAGAGGGCAGAGAAGAGGGAGA
GGAGGGGGGCTGAGGAGAAGGAGCGGAAGGAGCGCAGGGAGAGGTTCGAG
AAGGAGGCAAAAGAGGAAGAGGAGAAGCGGCGGGCGGAGGAGAATCGCCG
TAGACTCGGCAGTGGGGGAGGCAGGGGGGGCAAGCTGGGCTGGAAGAAAG
AGGATGAAGAGGATGATAGGTGGCGGCCTGAGAACGAGGGAGAGGAAGAA
GAGTTTGAGGAGAAAGAAAAAGGCTCTTCCTCCTCGTCTGATTCGTCCGA
CTCCGAGTAG back to top
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