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Properties
| Property Name | Value |
|---|
| TranscriptId | 243765 |
| Track | FilteredModels2 |
| ProteinId | 243679 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1211020..1212233 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_501 ID=mRNA_501|Name=jgi.p|Nanoce1779_2|243679|organism=Nannochloropsis oceanica|type=mRNA|length=1089bp
TCGAGGTTGTGTTCGCAGGAGAAAAAGCAGCGGCAACTCCGTGGAAACCG
AAACCATCGCCAGCTCGCTGAATTCAGCGCTCGACATGCGTCTTACAGCA
CACTACCGCCCCCAAGCATACACAGGGCGGCACAGTTATGCAGGCAGCCG
CGTCACTCGAAGGCCAAGTCATCCTTCCTGCCGACGATGAACCTTTCCCT
TCCCAACCCTCGCCACCACGGCATCCCCCGCTCACCGCTGTCCCATCCCC
AGCTTCAGACGTAATGATGCCAATGCTGGACTTGGAAGCCCCTGTCGTGG
TAATGCGGCTGCCGGGCAAGCGGCCCCGATGCAGACCTTGGAGTCCAGCA
GAGGAGGCGCGGCTGACAGACGTGTGCCAAAACTTCTGGCCGGACGTGAA
TTGGCCATTAGTAGCCGGAGAACTGGGCCGTGATGTCCGTGATTGCATCT
CACGAAGTACCTTGCTGCATCTCCAAGATCTACGCGGCGAGGCCCCTGTG
TCATCACCCAAGGAATTCTCGCCGACACATTCGCAGCCTGCACAATCAGC
AGAACAACAATTGCAGAATGAGGATGACGACACCATGCCCACCGCGACAA
GGACAATTGGGAAAGGTTTCAAGGACAAGGGTTTTCACATAGCTTCTGGT
GGTTTACACAAAACAGAAGCCAGTAGTAATAACAGTAGTAGAAAAAGTAG
TAGTAGTAGTAGTAGTAGGAGTAGTAGTAGTAGTTGTAGTAGTTGTAGTA
GTAGTAGTAATTATAATAGTAGTGGTGGTGGTGGTGGTGGTAGTAGTAGT
AGTAGTAGTAGTAGCAGCAGCAGCAGCGTGATCAATAACCCATTACCTAG
CCAGGTGGTAGCTCTGGCCTTGCAGCACCAATTTGATTGGGTGGCCGTTG
GTACGTTTGTGTCTGAGATGGTGAACAACAACTTTCATATAGCCACAACG
ACTAATTGAACATATTTCTTTATCTGAGCAGGCAGAGCCCTCAAGGCCGA
TCCTTGGGAGTGTTGGAAGACCTACGAGGCCTACACCCAAGGTAAGCTCC
TCCACACCCCATACTTTCTCCCTCTCTTTCCTCTCTCTA back to topprotein sequence of jgi.p|Nanoce1779_2|243679 >mRNA_501-protein ID=mRNA_501-protein|Name=jgi.p|Nanoce1779_2|243679|organism=Nannochloropsis oceanica|type=polypeptide|length=274bp
MQAAASLEGQVILPADDEPFPSQPSPPRHPPLTAVPSPASDVMMPMLDLE
APVVVMRLPGKRPRCRPWSPAEEARLTDVCQNFWPDVNWPLVAGELGRDV
RDCISRSTLLHLQDLRGEAPVSSPKEFSPTHSQPAQSAEQQLQNEDDDTM
PTATRTIGKGFKDKGFHIASGGLHKTEASSNNSSRKSSSSSSSRSSSSSC
SSCSSSSNYNSSGGGGGGSSSSSSSSSSSSVINNPLPSQVVALALQHQFD
WVAVGTFVSEMVNNNFHIATTTN* back to topmRNA from alignment at scaffold_3:1211020..1212233- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_501 ID=mRNA_501|Name=jgi.p|Nanoce1779_2|243679|organism=Nannochloropsis oceanica|type=mRNA|length=1214bp|location=Sequence derived from alignment at scaffold_3:1211020..1212233- (Nannochloropsis oceanica)
TCGAGGTTGTGTTCGCAGGAGAAAAAGCAGCGGCAACTCCGTGGAAACCG
AAACCATCGCCAGCTCGCTGAATTCAGCGCTCGACATGCGTCTTACAGCA
CACTACCGCCCCCAAGCATACACAGGGCGGCACAGTTATGCAGGCAGCCG
CGTCACTCGAAGGCCAAGTCATCCTTCCTGCCGACGATGAACCTTTCCCT
TCCCAACCCTCGCCACCACGGCATCCCCCGCTCACCGCTGTCCCATCCCC
AGCTTCAGACGTAATGATGCCAATGCTGGACTTGGAAGCCCCTGTCGTGG
TAATGCGGCTGCCGGGCAAGCGGCCCCGATGCAGACCTTGGAGTCCAGCA
GAGGAGGCGCGGCTGACAGACGTGTGCCAAAACTTCTGGCCGGACGTGAA
TTGTACGTAGAGAGACTTACCACGCCATGCTGTGTGTGGGGAGGTCGGTC
GGAGGAAAGCTGGAATAGATGTCCTGTGCTCACCCCCTTTACCTCACACC
CAATCTTGCGCGTCCATGCCTATATAGGGCCATTAGTAGCCGGAGAACTG
GGCCGTGATGTCCGTGATTGCATCTCACGAAGTACCTTGCTGCATCTCCA
AGATCTACGCGGCGAGGCCCCTGTGTCATCACCCAAGGAATTCTCGCCGA
CACATTCGCAGCCTGCACAATCAGCAGAACAACAATTGCAGAATGAGGAT
GACGACACCATGCCCACCGCGACAAGGACAATTGGGAAAGGTTTCAAGGA
CAAGGGTTTTCACATAGCTTCTGGTGGTTTACACAAAACAGAAGCCAGTA
GTAATAACAGTAGTAGAAAAAGTAGTAGTAGTAGTAGTAGTAGGAGTAGT
AGTAGTAGTTGTAGTAGTTGTAGTAGTAGTAGTAATTATAATAGTAGTGG
TGGTGGTGGTGGTGGTAGTAGTAGTAGTAGTAGTAGTAGCAGCAGCAGCA
GCGTGATCAATAACCCATTACCTAGCCAGGTGGTAGCTCTGGCCTTGCAG
CACCAATTTGATTGGGTGGCCGTTGGTACGTTTGTGTCTGAGATGGTGAA
CAACAACTTTCATATAGCCACAACGACTAATTGAACATATTTCTTTATCT
GAGCAGGCAGAGCCCTCAAGGCCGATCCTTGGGAGTGTTGGAAGACCTAC
GAGGCCTACACCCAAGGTAAGCTCCTCCACACCCCATACTTTCTCCCTCT
CTTTCCTCTCTCTA back to topCoding sequence (CDS) from alignment at scaffold_3:1211020..1212233- >mRNA_501 ID=mRNA_501|Name=jgi.p|Nanoce1779_2|243679|organism=Nannochloropsis oceanica|type=CDS|length=1644bp|location=Sequence derived from alignment at scaffold_3:1211020..1212233- (Nannochloropsis oceanica)
GGCCATTAGTAGCCGGAGAACTGGGCCGTGATGTCCGTGATTGCATCTCA
CGAAGTACCTTGCTGCATCTCCAAGATCTACGCGGCGAGGCCCCTGTGTC
ATCACCCAAGGAATTCTCGCCGACACATTCGCAGCCTGCACAATCAGCAG
AACAACAATTGCAGAATGAGGATGACGACACCATGCCCACCGCGACAAGG
ACAATTGGGAAAGGTTTCAAGGACAAGGGTTTTCACATAGCTTCTGGTGG
TTTACACAAAACAGAAGCCAGTAGTAATAACAGTAGTAGAAAAAGTAGTA
GTAGTAGTAGTAGTAGGAGTAGTAGTAGTAGTTGTAGTAGTTGTAGTAGT
AGTAGTAATTATAATAGTAGTGGTGGTGGTGGTGGTGGTAGTAGTAGTAG
TAGTAGTAGTAGCAGCAGCAGCAGCGTGATCAATAACCCATTACCTAGCC
AGGTGGTAGCTCTGGCCTTGCAGCACCAATTTGATTGGGTGGCCGTTGGT
ACGTTTGTGTCTGAGATGGTGAACAACAACTTTCATATAGCCACAACGAC
TAATTGAATGCAGGCAGCCGCGTCACTCGAAGGCCAAGTCATCCTTCCTG
CCGACGATGAACCTTTCCCTTCCCAACCCTCGCCACCACGGCATCCCCCG
CTCACCGCTGTCCCATCCCCAGCTTCAGACGTAATGATGCCAATGCTGGA
CTTGGAAGCCCCTGTCGTGGTAATGCGGCTGCCGGGCAAGCGGCCCCGAT
GCAGACCTTGGAGTCCAGCAGAGGAGGCGCGGCTGACAGACGTGTGCCAA
AACTTCTGGCCGGACGTGAATTGGCCATTAGTAGCCGGAGAACTGGGCCG
TGATGTCCGTGATTGCATCTCACGAAGTACCTTGCTGCATCTCCAAGATC
TACGCGGCGAGGCCCCTGTGTCATCACCCAAGGAATTCTCGCCGACACAT
TCGCAGCCTGCACAATCAGCAGAACAACAATTGCAGAATGAGGATGACGA
CACCATGCCCACCGCGACAAGGACAATTGGGAAAGGTTTCAAGGACAAGG
GTTTTCACATAGCTTCTGGTGGTTTACACAAAACAGAAGCCAGTAGTAAT
AACAGTAGTAGAAAAAGTAGTAGTAGTAGTAGTAGTAGGAGTAGTAGTAG
TAGTTGTAGTAGTTGTAGTAGTAGTAGTAATTATAATAGTAGTGGTGGTG
GTGGTGGTGGTAGTAGTAGTAGTAGTAGTAGTAGCAGCAGCAGCAGCGTG
ATCAATAACCCATTACCTAGCCAGGTGGTAGCTCTGGCCTTGCAGCACCA
ATTTGATTGGGTGGCCGTTGGTACGTTTGTGTCTGAGATGGTGAACAACA
ACTTTCATATAGCCACAACGACTAATTGAATGCAGGCAGCCGCGTCACTC
GAAGGCCAAGTCATCCTTCCTGCCGACGATGAACCTTTCCCTTCCCAACC
CTCGCCACCACGGCATCCCCCGCTCACCGCTGTCCCATCCCCAGCTTCAG
ACGTAATGATGCCAATGCTGGACTTGGAAGCCCCTGTCGTGGTAATGCGG
CTGCCGGGCAAGCGGCCCCGATGCAGACCTTGGAGTCCAGCAGAGGAGGC
GCGGCTGACAGACGTGTGCCAAAACTTCTGGCCGGACGTGAATT back to top
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