jgi.p|Nanoce1779_2|605256, gene_9628 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|605256
Unique Namegene_9628
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_31:124215..131673 -

Link to JBrowse

Properties
Property NameValue
TranscriptId605342
ProteinId605256
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_31supercontigscaffold_31:124215..131673 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0006888ER to Golgi vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0030127COPII vesicle coat
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL049ncniL049Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G04540NO06G04540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605256mRNA_9628-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605256mRNA_9628Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|605256

>mRNA_9628-protein ID=mRNA_9628-protein|Name=jgi.p|Nanoce1779_2|605256|organism=Nannochloropsis oceanica|type=polypeptide|length=794bp
MDPYGQGAQGGGYYMPQEDMSPLALEEKDGLRMSWGVWPSSRIEVTRIVV
PVAGLYTPLKRIETMPAPLEYDPIRCNGCGGVLNPHCSVDFRTKVWTCPF
CMTRNHFPPHYAENISEQNLPVELFSQYTTVEYELQVPPAGPPVFLLVVD
TCLEDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSPDCARS
YVFRGSKEYTPQRVQDLLNIAPPLHAQAPGMMMQPGMAADSMGGRTPALG
RFLCPVGDCSFNLEKILEDLQRDSWPVPSDQRPQRCTGVALSVATGLLES
SFPRQGARVMLFVGGPPTVGPGMIVGRPKTEDIRSHTDLAKGTAPHYKGA
VKHYASLAERAVSASHVIDIFACSLDQVGMMEMKVCVEKTGGLMVLADTF
SQSVFKESLLRVLKKLPAEVPKDGGHLQMGFAASLEVLTSREFKVAGAIG
PCSSLRKMAPNVAETAIGEGGTNAWSMGGIDPAVTVAVYFEVTNAANNPL
PPSKRRFIQFITQYQHASGRFRLRATTYSGAWHNDAADMGPVSRSFDQEA
ACVLMTRIAVQRTESDEEGTVHDVLRWVDRSLIKLSSKFGSYRKDDPASF
AFPQEFVLYPQFMFHLRRSQFLQLFNSSPDESSYYRTILIRENVANSLVM
IQPSLLSYSFSAPPQPVMLDATSIRPDCILLLDTFFHVVVFHGETVAAWR
AAGYQNTEEHINFKNLLDSPQLDAQMTMTSRFPVPRFIVCDQHKSQARFL
MAKLNPSITHHTGEVGMGQAMLTDDVSLRVFMEHLMKLAVQTP*
back to top
Synonyms
Publications