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Properties
| Property Name | Value |
|---|
| TranscriptId | 251569 |
| Track | FilteredModels2 |
| ProteinId | 251483 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:40821..42392 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9602 ID=mRNA_9602|Name=jgi.p|Nanoce1779_2|251483|organism=Nannochloropsis oceanica|type=mRNA|length=820bp
AGCATTATAGGTCTGGGGCCCTCCCCAAGAGAAAGAAGCTGACGCACGCT
CAAGAAGAAGATATGATGAATCGGCTACAAGACTTTACTCAGCAAATGAT
GCAACGACAGCAGCAGCAACAACAACAACAACAAAAACAACAACAACAAC
AACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAAGGGCACCATTCA
TCCTCCCTCTCCTCATTTTCTGGCGGAGGAGGGAGAGAGGGAGAGAGGGA
GAGAGGGAGGGAGGGAGGGACGACCGTGATTGTCTTTCACGATGCCGTCT
CTGAGGAACAATTAGAGGACAAGGAAGAGCTTGCAGAGCTACAGGCCAAT
ATCGCCCATGTCTGTCGCCCATTCGGTCGTCTCCAGTCTCTCTATATCCC
CCCCCACGAGGCCCATGATGCCGGGCTCATTTTCGTCGCCTATTCCACCC
CCAACGAAGCGCTCGCGGCCGTTGCCGGTCTCGCCGGACGGATGTTGGGA
GGGGATCCGCTGCAGGTGACACTCTGTCCTCAGGCCCAGGAGGGGAGGGA
GGGAGCGATGGCGCTTCCAAGTGACATGCTCGAGGAAAGGGAGGAGGACC
AGGACGAGAAGGAGCCCTATCAGCACCAGCACCAGCATCATCATCATCAG
CACCCTCCCCAAGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCGTGCTG
CGCCGCTTCCGTCGTCCTCCACGCCTCGCCTACTCATCGGCGTCGGTGCT
CCTGGCACAGATGGAGGAGGAGGAGCTGATCGAGATAGGTCTCAACGTGC
AGACACTCGCGGAACTTTTC back to topprotein sequence of jgi.p|Nanoce1779_2|251483 >mRNA_9602-protein ID=mRNA_9602-protein|Name=jgi.p|Nanoce1779_2|251483|organism=Nannochloropsis oceanica|type=polypeptide|length=239bp
MMNRLQDFTQQMMQRQQQQQQQQQKQQQQQQQQQQQQQQQQQGHHSSSLS
SFSGGGGREGERERGREGGTTVIVFHDAVSEEQLEDKEELAELQANIAHV
CRPFGRLQSLYIPPHEAHDAGLIFVAYSTPNEALAAVAGLAGRMLGGDPL
QVTLCPQAQEGREGAMALPSDMLEEREEDQDEKEPYQHQHQHHHHQHPPQ
ALPSLPPSLPPCCAASVVLHASPTHRRRCSWHRWRRRS* back to topmRNA from alignment at scaffold_31:40821..42392- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9602 ID=mRNA_9602|Name=jgi.p|Nanoce1779_2|251483|organism=Nannochloropsis oceanica|type=mRNA|length=1572bp|location=Sequence derived from alignment at scaffold_31:40821..42392- (Nannochloropsis oceanica)
AGCATTATAGGTCTGGGGCCCTCCCCAAGAGAAAGAAGCTGACGCACGCT
CAAGAAGAAGATATGATGGTGAGGCTTGTCCCCCTCCGTCCCGCCCTCCC
CCCCCCCTCCCTCCCCTCGCCCTTCTTCATTCTTCATCCATTTCCCCCCT
CATCATTTCCTCCGAGCTTTGGACGGCCAGATCACGCATTCTCCATACCT
TTCCCTCCCTCCCTCCCATCCCTCCCGTCCCTCCCTCCCTATTTTCCTTC
CTTCCATATTACCTCAGAATCGGCTACAAGACTTTACTCAGCAAATGATG
CAACGACAGCAGCAGCAACAACAACAACAACAAAAACAACAACAACAACA
ACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAAGGGCACCATTCAT
CCTCCCTCTCCTCATTTTCTGGCGGAGGAGGGAGAGAGGGAGAGAGGGAG
AGAGGGAGGGAGGGAGGGACGACCGTGATTGTCTTTCACGATGCCGTCTC
TGAGGAACAATTAGAGGACAAGGAAGAGCTTGCAGAGCTACAGGTGCACA
GAAAGAAGGAGGGAGGGAGGGAGGGATGGAGGGAGGAAAGTAGTGGGGGA
AGAAGGTTTAAGAGGGAGGGATACGGGAAGTTTGAGTGCATGTACTTCGG
TGTCGTTGCGCTCAACCCTACCCCCCTCCTTCCTTCCTCCCTTCCTCCCT
CCCTCCGTCAGGCCAATATCGCCCATGTCTGTCGCCCATTCGGTCGTCTC
CAGTCTCTCTATATCCCCCCCCACGAGGCCCATGATGCCGGGCTCATTTT
CGTCGCCTATTCCACCCCCAACGAAGCGCTCGCGGGTACGTTTTAACGGC
TTGCTTTCCCTCTCCCTCCCCTTTCATCTGTCAATCTATCAATCTATCTC
TCCTATCTCCCTCTCTCTCTCTCTTGCTGCTGACATCCTTCCTTCCTTCC
CTCCTTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCTTAGCC
GTTGCCGGTCTCGCCGGACGGATGTTGGGAGGGGATCCGCTGCAGGTGAC
ACTCTGTCCTCAGGCCCAGGAGGGGAGGGAGGGAGCGATGGCGCTTCCAA
GTGACATGCTCGAGGAAAGGGAGGAGGACCAGGACGAGAAGGAGGTAAGG
AGGGAGGGAGATGTCCAGGCCCTCTCTCTCGCTCTGTCTCCCGCTTCCTC
ATTTCACCCACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCACC
ACCGCAACAGCCCTATCAGCACCAGCACCAGCATCATCATCATCAGCACC
CTCCCCAAGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCGTGCTGCGCC
GCTTCCGTCGTCCTCCACGCGTTCGCCGGGACCGGTTTCAGCGCCGGAGG
AGGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGAAGCGCAGGAGGGAGGG
GGAGTGGCTTCTCCTCCCCTGCCTCCCTCGCCTACTCATCGGCGTCGGTG
CTCCTGGCACAGATGGAGGAGGAGGAGCTGATCGAGATAGGTCTCAACGT
GCAGACACTCGCGGAACTTTTC back to topCoding sequence (CDS) from alignment at scaffold_31:40821..42392- >mRNA_9602 ID=mRNA_9602|Name=jgi.p|Nanoce1779_2|251483|organism=Nannochloropsis oceanica|type=CDS|length=4302bp|location=Sequence derived from alignment at scaffold_31:40821..42392- (Nannochloropsis oceanica)
CTCGCCTACTCATCGGCGTCGGTGCTCCTGGCACAGATGGAGGAGGAGGA
GCTGACCCTATCAGCACCAGCACCAGCATCATCATCATCAGCACCCTCCC
CAAGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCGTGCTGCGCCGCTTC
CGTCGTCCTCCACGCCCGTTGCCGGTCTCGCCGGACGGATGTTGGGAGGG
GATCCGCTGCAGGTGACACTCTGTCCTCAGGCCCAGGAGGGGAGGGAGGG
AGCGATGGCGCTTCCAAGTGACATGCTCGAGGAAAGGGAGGAGGACCAGG
ACGAGAAGGAGGCCAATATCGCCCATGTCTGTCGCCCATTCGGTCGTCTC
CAGTCTCTCTATATCCCCCCCCACGAGGCCCATGATGCCGGGCTCATTTT
CGTCGCCTATTCCACCCCCAACGAAGCGCTCGCGGAATCGGCTACAAGAC
TTTACTCAGCAAATGATGCAACGACAGCAGCAGCAACAACAACAACAACA
AAAACAACAACAACAACAACAACAACAACAGCAGCAGCAGCAGCAGCAGC
AGCAAGGGCACCATTCATCCTCCCTCTCCTCATTTTCTGGCGGAGGAGGG
AGAGAGGGAGAGAGGGAGAGAGGGAGGGAGGGAGGGACGACCGTGATTGT
CTTTCACGATGCCGTCTCTGAGGAACAATTAGAGGACAAGGAAGAGCTTG
CAGAGCTACAGATGATGCTCGCCTACTCATCGGCGTCGGTGCTCCTGGCA
CAGATGGAGGAGGAGGAGCTGACCCTATCAGCACCAGCACCAGCATCATC
ATCATCAGCACCCTCCCCAAGCCCTTCCCTCCCTCCCTCCCTCCCTCCCT
CCGTGCTGCGCCGCTTCCGTCGTCCTCCACGCCCGTTGCCGGTCTCGCCG
GACGGATGTTGGGAGGGGATCCGCTGCAGGTGACACTCTGTCCTCAGGCC
CAGGAGGGGAGGGAGGGAGCGATGGCGCTTCCAAGTGACATGCTCGAGGA
AAGGGAGGAGGACCAGGACGAGAAGGAGGCCAATATCGCCCATGTCTGTC
GCCCATTCGGTCGTCTCCAGTCTCTCTATATCCCCCCCCACGAGGCCCAT
GATGCCGGGCTCATTTTCGTCGCCTATTCCACCCCCAACGAAGCGCTCGC
GGAATCGGCTACAAGACTTTACTCAGCAAATGATGCAACGACAGCAGCAG
CAACAACAACAACAACAAAAACAACAACAACAACAACAACAACAACAGCA
GCAGCAGCAGCAGCAGCAGCAAGGGCACCATTCATCCTCCCTCTCCTCAT
TTTCTGGCGGAGGAGGGAGAGAGGGAGAGAGGGAGAGAGGGAGGGAGGGA
GGGACGACCGTGATTGTCTTTCACGATGCCGTCTCTGAGGAACAATTAGA
GGACAAGGAAGAGCTTGCAGAGCTACAGATGATGCTCGCCTACTCATCGG
CGTCGGTGCTCCTGGCACAGATGGAGGAGGAGGAGCTGACCCTATCAGCA
CCAGCACCAGCATCATCATCATCAGCACCCTCCCCAAGCCCTTCCCTCCC
TCCCTCCCTCCCTCCCTCCGTGCTGCGCCGCTTCCGTCGTCCTCCACGCC
CGTTGCCGGTCTCGCCGGACGGATGTTGGGAGGGGATCCGCTGCAGGTGA
CACTCTGTCCTCAGGCCCAGGAGGGGAGGGAGGGAGCGATGGCGCTTCCA
AGTGACATGCTCGAGGAAAGGGAGGAGGACCAGGACGAGAAGGAGGCCAA
TATCGCCCATGTCTGTCGCCCATTCGGTCGTCTCCAGTCTCTCTATATCC
CCCCCCACGAGGCCCATGATGCCGGGCTCATTTTCGTCGCCTATTCCACC
CCCAACGAAGCGCTCGCGGAATCGGCTACAAGACTTTACTCAGCAAATGA
TGCAACGACAGCAGCAGCAACAACAACAACAACAAAAACAACAACAACAA
CAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAAGGGCACCATTC
ATCCTCCCTCTCCTCATTTTCTGGCGGAGGAGGGAGAGAGGGAGAGAGGG
AGAGAGGGAGGGAGGGAGGGACGACCGTGATTGTCTTTCACGATGCCGTC
TCTGAGGAACAATTAGAGGACAAGGAAGAGCTTGCAGAGCTACAGATGAT
GCTCGCCTACTCATCGGCGTCGGTGCTCCTGGCACAGATGGAGGAGGAGG
AGCTGACCCTATCAGCACCAGCACCAGCATCATCATCATCAGCACCCTCC
CCAAGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCGTGCTGCGCCGCTT
CCGTCGTCCTCCACGCCCGTTGCCGGTCTCGCCGGACGGATGTTGGGAGG
GGATCCGCTGCAGGTGACACTCTGTCCTCAGGCCCAGGAGGGGAGGGAGG
GAGCGATGGCGCTTCCAAGTGACATGCTCGAGGAAAGGGAGGAGGACCAG
GACGAGAAGGAGGCCAATATCGCCCATGTCTGTCGCCCATTCGGTCGTCT
CCAGTCTCTCTATATCCCCCCCCACGAGGCCCATGATGCCGGGCTCATTT
TCGTCGCCTATTCCACCCCCAACGAAGCGCTCGCGGAATCGGCTACAAGA
CTTTACTCAGCAAATGATGCAACGACAGCAGCAGCAACAACAACAACAAC
AAAAACAACAACAACAACAACAACAACAACAGCAGCAGCAGCAGCAGCAG
CAGCAAGGGCACCATTCATCCTCCCTCTCCTCATTTTCTGGCGGAGGAGG
GAGAGAGGGAGAGAGGGAGAGAGGGAGGGAGGGAGGGACGACCGTGATTG
TCTTTCACGATGCCGTCTCTGAGGAACAATTAGAGGACAAGGAAGAGCTT
GCAGAGCTACAGATGATGCTCGCCTACTCATCGGCGTCGGTGCTCCTGGC
ACAGATGGAGGAGGAGGAGCTGACCCTATCAGCACCAGCACCAGCATCAT
CATCATCAGCACCCTCCCCAAGCCCTTCCCTCCCTCCCTCCCTCCCTCCC
TCCGTGCTGCGCCGCTTCCGTCGTCCTCCACGCCCGTTGCCGGTCTCGCC
GGACGGATGTTGGGAGGGGATCCGCTGCAGGTGACACTCTGTCCTCAGGC
CCAGGAGGGGAGGGAGGGAGCGATGGCGCTTCCAAGTGACATGCTCGAGG
AAAGGGAGGAGGACCAGGACGAGAAGGAGGCCAATATCGCCCATGTCTGT
CGCCCATTCGGTCGTCTCCAGTCTCTCTATATCCCCCCCCACGAGGCCCA
TGATGCCGGGCTCATTTTCGTCGCCTATTCCACCCCCAACGAAGCGCTCG
CGGAATCGGCTACAAGACTTTACTCAGCAAATGATGCAACGACAGCAGCA
GCAACAACAACAACAACAAAAACAACAACAACAACAACAACAACAACAGC
AGCAGCAGCAGCAGCAGCAGCAAGGGCACCATTCATCCTCCCTCTCCTCA
TTTTCTGGCGGAGGAGGGAGAGAGGGAGAGAGGGAGAGAGGGAGGGAGGG
AGGGACGACCGTGATTGTCTTTCACGATGCCGTCTCTGAGGAACAATTAG
AGGACAAGGAAGAGCTTGCAGAGCTACAGATGATGCTCGCCTACTCATCG
GCGTCGGTGCTCCTGGCACAGATGGAGGAGGAGGAGCTGACCCTATCAGC
ACCAGCACCAGCATCATCATCATCAGCACCCTCCCCAAGCCCTTCCCTCC
CTCCCTCCCTCCCTCCCTCCGTGCTGCGCCGCTTCCGTCGTCCTCCACGC
CCGTTGCCGGTCTCGCCGGACGGATGTTGGGAGGGGATCCGCTGCAGGTG
ACACTCTGTCCTCAGGCCCAGGAGGGGAGGGAGGGAGCGATGGCGCTTCC
AAGTGACATGCTCGAGGAAAGGGAGGAGGACCAGGACGAGAAGGAGGCCA
ATATCGCCCATGTCTGTCGCCCATTCGGTCGTCTCCAGTCTCTCTATATC
CCCCCCCACGAGGCCCATGATGCCGGGCTCATTTTCGTCGCCTATTCCAC
CCCCAACGAAGCGCTCGCGGAATCGGCTACAAGACTTTACTCAGCAAATG
ATGCAACGACAGCAGCAGCAACAACAACAACAACAAAAACAACAACAACA
ACAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAAGGGCACCATT
CATCCTCCCTCTCCTCATTTTCTGGCGGAGGAGGGAGAGAGGGAGAGAGG
GAGAGAGGGAGGGAGGGAGGGACGACCGTGATTGTCTTTCACGATGCCGT
CTCTGAGGAACAATTAGAGGACAAGGAAGAGCTTGCAGAGCTACAGATGA
TG back to top
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