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Properties
| Property Name | Value |
|---|
| TranscriptId | 606601 |
| Track | FilteredModels2 |
| ProteinId | 606515 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:173766..175980 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9352 ID=mRNA_9352|Name=jgi.p|Nanoce1779_2|606515|organism=Nannochloropsis oceanica|type=mRNA|length=1196bp
ACAGCCACAGTTCAATGAAGCTCTCATTCGCCCTTGTTCTCTGCATTTAC
CTACCTGTGGTACTCCTGGCCTTGCCTGCTCAAGAATGTCCTCCTGGTTT
TGGCACCTCGGGATGGGTCAACGACATGGGGTTTCTGGCTGATGCGGTCT
CGATGGGGGGGCCCGATTTCAAGGACGACTCCCAAGGTGTGTGTGGGACG
TATAAAGTGATCAAGACGTGCGAAGCGCAGTACCAGACACGGATGCGTAT
TTACCAATCTAAGGCAGATAGCAACGTGGTCGTCCTTTCATTTCGTCCGA
CTCAACAGAATACTGAGGGCCTGGCCATCCACGACAGCCGGCAGATGGTT
CCTTGCAAGTTTCTCCACCGGGGCAACTGCACCGGTCGGGTCCACAGGAG
GTTCCAACGGGCATTCCTGGAGCTCATGACCAAGTGCCAAGGCGCAGTGG
AGCAGATCAAACACAAGAAGCACATCTTCGTCACAGGCCACTCCCTGGGA
GGAGCATTAGCGCTCTTCTTCACGTTGCATCTGTGGAGGGACCTAGGGAT
CTTACCAGCCATGAGCATCGGCTTTGCAGGACCTTTTATCGGTGATGAGG
ACTTCACCGACGCCTACCAAGAGCCGCTTAAGCACCTCATGGGCGACCAG
TGGTGGCAGGTAGAGACCGTCAACAAATACAACACCAGCGAATTCGATGG
CACTGTGGAAGAATACAACATGGGCCAGGACGGACCTCAGATCTACATCG
AGCGGGATGCCGTCTGTGGCGTGTATATCAAGCCACTGCCTGTCGATACC
AACCAGACCGCAAGCCCACACTACAGCTACGGTATGCACGACCTCAAAAA
CTACAGACTTCTCTCCGACCAGGGGAAGGATTGCAGGGCCTTCTGAATAG
CAGGAGGAGCAGGCGGAGCAGGAGGAGCAGGAGCAGGAGTTGCAGTACGC
AGTGATAAGTGTGCGAGCCTCTCTATCTCTCCATTTACACATCTGCATAC
ATGTACATACATGCAGATACACACGCACACATGCACAAACAAACACACAT
AGTATATATACATATGTATACACAAACACATATATATATATGTATATATA
TACATGTGTGTGTATATGTGTACATATATATATATATATATATATATATA
TATATACATATATTTAGAGAGCGAGGGACATAGAAAAAAAGAAAAA back to topprotein sequence of jgi.p|Nanoce1779_2|606515 >mRNA_9352-protein ID=mRNA_9352-protein|Name=jgi.p|Nanoce1779_2|606515|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MKLSFALVLCIYLPVVLLALPAQECPPGFGTSGWVNDMGFLADAVSMGGP
DFKDDSQGVCGTYKVIKTCEAQYQTRMRIYQSKADSNVVVLSFRPTQQNT
EGLAIHDSRQMVPCKFLHRGNCTGRVHRRFQRAFLELMTKCQGAVEQIKH
KKHIFVTGHSLGGALALFFTLHLWRDLGILPAMSIGFAGPFIGDEDFTDA
YQEPLKHLMGDQWWQVETVNKYNTSEFDGTVEEYNMGQDGPQIYIERDAV
CGVYIKPLPVDTNQTASPHYSYGMHDLKNYRLLSDQGKDCRAF* back to topmRNA from alignment at scaffold_35:173766..175980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9352 ID=mRNA_9352|Name=jgi.p|Nanoce1779_2|606515|organism=Nannochloropsis oceanica|type=mRNA|length=2215bp|location=Sequence derived from alignment at scaffold_35:173766..175980- (Nannochloropsis oceanica)
ACAGCCACAGTTCAATGAAGCTCTCATTCGCCCTTGTTCTCTGCATTTAC
CTACCTGTGGTACTCCTGGCCTTGCCTGCTCAAGAATGTCCTCCTGGTTT
TGGCACCTCGGGATGGGTCAACGACATGGGGTTTCTGGCTGATGCGGTCT
CGATGGGGGGGCCCGATTTCAAGGACGACTCCCAAGGTGTGTGTGGGACG
TATAAAGTGATCAAGACGTGCGAAGCGCAGGTAAAAGAAGAAGAGAGGGA
AAGTGGAGGAGGAGGGACGAAGAGGACGAGGGATAGGCTACGATTCTCGT
CACCGCCTCTTCATTCCTCCCTCTGTCCTCCGCATAATAGTACCAGACAC
GGATGCGTATTTACCAATCTAAGGCAGATAGCAACGTGGTCGTCCTTTCA
TTTCGTCCGACTCAACAGAATACTGAGGTAAGAAGGCAAAAGAAAAGAGA
GAGGAACAGGGGAGAGGAATGGATAGAGCGAAGAAGGGGAGGGCGAGTTA
AGGCATGTTGATATCGGCGCCTGCTCTTCAATTTAACTGTCGGACTGGTC
GATGATTGATCCTCTGCTGTACACACAAGCCATCATCTCAGTCCCGCCCC
CTCCCTATGTTCCCCCCTTCCTCCTTTCTTCCTTCCGCCCACCAGGGCCT
GGCCATCCACGACAGCCGGCAGATGGTTCCTTGCAAGTTTCTCCACCGGG
GCAACTGCACCGGTCGGGTCCACAGGAGGTTCCAACGGGCATTCCTGGAG
GTAAGGAGAGCAAAGGAGGGTGAACGGAACATTCCACAAGCTTTTTGTTT
TGGGAGGCATGATCGAGGGAGGTTGAGGGGGAGGGAGCTAGTGCGTCTTC
TTGTGCCAGTCCCCCCCCGTGTGAGAGGGCCTTGCACTGCACGACATATT
TGCATCCCGGGAGACTTACTCAAGCTCAATCTCCCCCCCTTCCACCCTCC
CCCTCTACTCCTCCCAAGCTCATGACCAAGTGCCAAGGCGCAGTGGAGCA
GATCAAACACAAGAAGCACATCTTCGTCACAGGCCACTCCCTGGGAGGAG
CATTAGCGCTCTTCTTCACGTTGCATCTGTGGAGGGACCTAGGGATCTTA
CCAGCCATGAGCATCGGCTTTGCAGGACCTTTTATCGGTGATGAGGACTT
CACCGACGCCTACCAAGAGCCGCTTAAGCACCTCATGGGCGACCAGTGGT
GGCAGGCACGTATCTGACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCTTTCCTTCCCCCTTCCCTTCCTTGCGTTCCTGG
CCTCGGCCCTGTCATATTTCCTTCCTCCATTTTCCCATATCTTTTTGTTC
CCTCTCCTTCCTCTTAATCGACCACCCTTACAGGTAGAGACCGTCAACAA
ATACAACACCAGCGAATTCGATGGCACTGGTAAGTTCCCCCCCTCCCTCT
CTCCATCCCTCCATCCTATTCTTTCCTGATCAATAACGCCTCTCCCCCTC
CCTCCCCCTTCCCTGTCCACCTCTTTTCCCCTCTAGTGGAAGAATACAAC
ATGGGCCAGGACGGACCTCAGATCTACATCGAGCGGGATGCCGTCTGTGG
CGTGTATATCAAGCCACTGCCTGTCGATACCAACCAGACCGCAAGCCCAC
ACTACAGCTACGGTATGCACGACCTCAAAAACTACAGGTAGGCGCATGCA
TGACCATTGTCGCACCCCTCATTTCCTCCCTCCCTCCCTCCCTCCTTCTC
CACCACCCTCTCCACAATTCTCGTTTCTCCGTCTTCCCTTCCTCCCCATC
CACTTTCCTGCCTCTGACCCTGCTATGGTCTTCCCCTGACTTTCTTCCTA
CCGCATCCCTGTCCCCTCGCCTCAGACTTCTCTCCGACCAGGGGAAGGAT
TGCAGGGCCTTCTGAATAGCAGGAGGAGCAGGCGGAGCAGGAGGAGCAGG
AGCAGGAGTTGCAGTACGCAGTGATAAGTGTGCGAGCCTCTCTATCTCTC
CATTTACACATCTGCATACATGTACATACATGCAGATACACACGCACACA
TGCACAAACAAACACACATAGTATATATACATATGTATACACAAACACAT
ATATATATATGTATATATATACATGTGTGTGTATATGTGTACATATATAT
ATATATATATATATATATATATATACATATATTTAGAGAGCGAGGGACAT
AGAAAAAAAGAAAAA back to topCoding sequence (CDS) from alignment at scaffold_35:173766..175980- >mRNA_9352 ID=mRNA_9352|Name=jgi.p|Nanoce1779_2|606515|organism=Nannochloropsis oceanica|type=CDS|length=6174bp|location=Sequence derived from alignment at scaffold_35:173766..175980- (Nannochloropsis oceanica)
ACTTCTCTCCGACCAGGGGAAGGATTGCAGGGCCTTCTGATGGAAGAATA
CAACATGGGCCAGGACGGACCTCAGATCTACATCGAGCGGGATGCCGTCT
GTGGCGTGTATATCAAGCCACTGCCTGTCGATACCAACCAGACCGCAAGC
CCACACTACAGCTACGGTATGCACGACCTCAAAAACTACAGGTAGAGACC
GTCAACAAATACAACACCAGCGAATTCGATGGCACTGCTCATGACCAAGT
GCCAAGGCGCAGTGGAGCAGATCAAACACAAGAAGCACATCTTCGTCACA
GGCCACTCCCTGGGAGGAGCATTAGCGCTCTTCTTCACGTTGCATCTGTG
GAGGGACCTAGGGATCTTACCAGCCATGAGCATCGGCTTTGCAGGACCTT
TTATCGGTGATGAGGACTTCACCGACGCCTACCAAGAGCCGCTTAAGCAC
CTCATGGGCGACCAGTGGTGGCAGGGCCTGGCCATCCACGACAGCCGGCA
GATGGTTCCTTGCAAGTTTCTCCACCGGGGCAACTGCACCGGTCGGGTCC
ACAGGAGGTTCCAACGGGCATTCCTGGAGTACCAGACACGGATGCGTATT
TACCAATCTAAGGCAGATAGCAACGTGGTCGTCCTTTCATTTCGTCCGAC
TCAACAGAATACTGAGATGAAGCTCTCATTCGCCCTTGTTCTCTGCATTT
ACCTACCTGTGGTACTCCTGGCCTTGCCTGCTCAAGAATGTCCTCCTGGT
TTTGGCACCTCGGGATGGGTCAACGACATGGGGTTTCTGGCTGATGCGGT
CTCGATGGGGGGGCCCGATTTCAAGGACGACTCCCAAGGTGTGTGTGGGA
CGTATAAAGTGATCAAGACGTGCGAAGCGCAGACTTCTCTCCGACCAGGG
GAAGGATTGCAGGGCCTTCTGATGGAAGAATACAACATGGGCCAGGACGG
ACCTCAGATCTACATCGAGCGGGATGCCGTCTGTGGCGTGTATATCAAGC
CACTGCCTGTCGATACCAACCAGACCGCAAGCCCACACTACAGCTACGGT
ATGCACGACCTCAAAAACTACAGGTAGAGACCGTCAACAAATACAACACC
AGCGAATTCGATGGCACTGCTCATGACCAAGTGCCAAGGCGCAGTGGAGC
AGATCAAACACAAGAAGCACATCTTCGTCACAGGCCACTCCCTGGGAGGA
GCATTAGCGCTCTTCTTCACGTTGCATCTGTGGAGGGACCTAGGGATCTT
ACCAGCCATGAGCATCGGCTTTGCAGGACCTTTTATCGGTGATGAGGACT
TCACCGACGCCTACCAAGAGCCGCTTAAGCACCTCATGGGCGACCAGTGG
TGGCAGGGCCTGGCCATCCACGACAGCCGGCAGATGGTTCCTTGCAAGTT
TCTCCACCGGGGCAACTGCACCGGTCGGGTCCACAGGAGGTTCCAACGGG
CATTCCTGGAGTACCAGACACGGATGCGTATTTACCAATCTAAGGCAGAT
AGCAACGTGGTCGTCCTTTCATTTCGTCCGACTCAACAGAATACTGAGAT
GAAGCTCTCATTCGCCCTTGTTCTCTGCATTTACCTACCTGTGGTACTCC
TGGCCTTGCCTGCTCAAGAATGTCCTCCTGGTTTTGGCACCTCGGGATGG
GTCAACGACATGGGGTTTCTGGCTGATGCGGTCTCGATGGGGGGGCCCGA
TTTCAAGGACGACTCCCAAGGTGTGTGTGGGACGTATAAAGTGATCAAGA
CGTGCGAAGCGCAGACTTCTCTCCGACCAGGGGAAGGATTGCAGGGCCTT
CTGATGGAAGAATACAACATGGGCCAGGACGGACCTCAGATCTACATCGA
GCGGGATGCCGTCTGTGGCGTGTATATCAAGCCACTGCCTGTCGATACCA
ACCAGACCGCAAGCCCACACTACAGCTACGGTATGCACGACCTCAAAAAC
TACAGGTAGAGACCGTCAACAAATACAACACCAGCGAATTCGATGGCACT
GCTCATGACCAAGTGCCAAGGCGCAGTGGAGCAGATCAAACACAAGAAGC
ACATCTTCGTCACAGGCCACTCCCTGGGAGGAGCATTAGCGCTCTTCTTC
ACGTTGCATCTGTGGAGGGACCTAGGGATCTTACCAGCCATGAGCATCGG
CTTTGCAGGACCTTTTATCGGTGATGAGGACTTCACCGACGCCTACCAAG
AGCCGCTTAAGCACCTCATGGGCGACCAGTGGTGGCAGGGCCTGGCCATC
CACGACAGCCGGCAGATGGTTCCTTGCAAGTTTCTCCACCGGGGCAACTG
CACCGGTCGGGTCCACAGGAGGTTCCAACGGGCATTCCTGGAGTACCAGA
CACGGATGCGTATTTACCAATCTAAGGCAGATAGCAACGTGGTCGTCCTT
TCATTTCGTCCGACTCAACAGAATACTGAGATGAAGCTCTCATTCGCCCT
TGTTCTCTGCATTTACCTACCTGTGGTACTCCTGGCCTTGCCTGCTCAAG
AATGTCCTCCTGGTTTTGGCACCTCGGGATGGGTCAACGACATGGGGTTT
CTGGCTGATGCGGTCTCGATGGGGGGGCCCGATTTCAAGGACGACTCCCA
AGGTGTGTGTGGGACGTATAAAGTGATCAAGACGTGCGAAGCGCAGACTT
CTCTCCGACCAGGGGAAGGATTGCAGGGCCTTCTGATGGAAGAATACAAC
ATGGGCCAGGACGGACCTCAGATCTACATCGAGCGGGATGCCGTCTGTGG
CGTGTATATCAAGCCACTGCCTGTCGATACCAACCAGACCGCAAGCCCAC
ACTACAGCTACGGTATGCACGACCTCAAAAACTACAGGTAGAGACCGTCA
ACAAATACAACACCAGCGAATTCGATGGCACTGCTCATGACCAAGTGCCA
AGGCGCAGTGGAGCAGATCAAACACAAGAAGCACATCTTCGTCACAGGCC
ACTCCCTGGGAGGAGCATTAGCGCTCTTCTTCACGTTGCATCTGTGGAGG
GACCTAGGGATCTTACCAGCCATGAGCATCGGCTTTGCAGGACCTTTTAT
CGGTGATGAGGACTTCACCGACGCCTACCAAGAGCCGCTTAAGCACCTCA
TGGGCGACCAGTGGTGGCAGGGCCTGGCCATCCACGACAGCCGGCAGATG
GTTCCTTGCAAGTTTCTCCACCGGGGCAACTGCACCGGTCGGGTCCACAG
GAGGTTCCAACGGGCATTCCTGGAGTACCAGACACGGATGCGTATTTACC
AATCTAAGGCAGATAGCAACGTGGTCGTCCTTTCATTTCGTCCGACTCAA
CAGAATACTGAGATGAAGCTCTCATTCGCCCTTGTTCTCTGCATTTACCT
ACCTGTGGTACTCCTGGCCTTGCCTGCTCAAGAATGTCCTCCTGGTTTTG
GCACCTCGGGATGGGTCAACGACATGGGGTTTCTGGCTGATGCGGTCTCG
ATGGGGGGGCCCGATTTCAAGGACGACTCCCAAGGTGTGTGTGGGACGTA
TAAAGTGATCAAGACGTGCGAAGCGCAGACTTCTCTCCGACCAGGGGAAG
GATTGCAGGGCCTTCTGATGGAAGAATACAACATGGGCCAGGACGGACCT
CAGATCTACATCGAGCGGGATGCCGTCTGTGGCGTGTATATCAAGCCACT
GCCTGTCGATACCAACCAGACCGCAAGCCCACACTACAGCTACGGTATGC
ACGACCTCAAAAACTACAGGTAGAGACCGTCAACAAATACAACACCAGCG
AATTCGATGGCACTGCTCATGACCAAGTGCCAAGGCGCAGTGGAGCAGAT
CAAACACAAGAAGCACATCTTCGTCACAGGCCACTCCCTGGGAGGAGCAT
TAGCGCTCTTCTTCACGTTGCATCTGTGGAGGGACCTAGGGATCTTACCA
GCCATGAGCATCGGCTTTGCAGGACCTTTTATCGGTGATGAGGACTTCAC
CGACGCCTACCAAGAGCCGCTTAAGCACCTCATGGGCGACCAGTGGTGGC
AGGGCCTGGCCATCCACGACAGCCGGCAGATGGTTCCTTGCAAGTTTCTC
CACCGGGGCAACTGCACCGGTCGGGTCCACAGGAGGTTCCAACGGGCATT
CCTGGAGTACCAGACACGGATGCGTATTTACCAATCTAAGGCAGATAGCA
ACGTGGTCGTCCTTTCATTTCGTCCGACTCAACAGAATACTGAGATGAAG
CTCTCATTCGCCCTTGTTCTCTGCATTTACCTACCTGTGGTACTCCTGGC
CTTGCCTGCTCAAGAATGTCCTCCTGGTTTTGGCACCTCGGGATGGGTCA
ACGACATGGGGTTTCTGGCTGATGCGGTCTCGATGGGGGGGCCCGATTTC
AAGGACGACTCCCAAGGTGTGTGTGGGACGTATAAAGTGATCAAGACGTG
CGAAGCGCAGACTTCTCTCCGACCAGGGGAAGGATTGCAGGGCCTTCTGA
TGGAAGAATACAACATGGGCCAGGACGGACCTCAGATCTACATCGAGCGG
GATGCCGTCTGTGGCGTGTATATCAAGCCACTGCCTGTCGATACCAACCA
GACCGCAAGCCCACACTACAGCTACGGTATGCACGACCTCAAAAACTACA
GGTAGAGACCGTCAACAAATACAACACCAGCGAATTCGATGGCACTGCTC
ATGACCAAGTGCCAAGGCGCAGTGGAGCAGATCAAACACAAGAAGCACAT
CTTCGTCACAGGCCACTCCCTGGGAGGAGCATTAGCGCTCTTCTTCACGT
TGCATCTGTGGAGGGACCTAGGGATCTTACCAGCCATGAGCATCGGCTTT
GCAGGACCTTTTATCGGTGATGAGGACTTCACCGACGCCTACCAAGAGCC
GCTTAAGCACCTCATGGGCGACCAGTGGTGGCAGGGCCTGGCCATCCACG
ACAGCCGGCAGATGGTTCCTTGCAAGTTTCTCCACCGGGGCAACTGCACC
GGTCGGGTCCACAGGAGGTTCCAACGGGCATTCCTGGAGTACCAGACACG
GATGCGTATTTACCAATCTAAGGCAGATAGCAACGTGGTCGTCCTTTCAT
TTCGTCCGACTCAACAGAATACTGAGATGAAGCTCTCATTCGCCCTTGTT
CTCTGCATTTACCTACCTGTGGTACTCCTGGCCTTGCCTGCTCAAGAATG
TCCTCCTGGTTTTGGCACCTCGGGATGGGTCAACGACATGGGGTTTCTGG
CTGATGCGGTCTCGATGGGGGGGCCCGATTTCAAGGACGACTCCCAAGGT
GTGTGTGGGACGTATAAAGTGATCAAGACGTGCGAAGCGCAGACTTCTCT
CCGACCAGGGGAAGGATTGCAGGGCCTTCTGATGGAAGAATACAACATGG
GCCAGGACGGACCTCAGATCTACATCGAGCGGGATGCCGTCTGTGGCGTG
TATATCAAGCCACTGCCTGTCGATACCAACCAGACCGCAAGCCCACACTA
CAGCTACGGTATGCACGACCTCAAAAACTACAGGTAGAGACCGTCAACAA
ATACAACACCAGCGAATTCGATGGCACTGCTCATGACCAAGTGCCAAGGC
GCAGTGGAGCAGATCAAACACAAGAAGCACATCTTCGTCACAGGCCACTC
CCTGGGAGGAGCATTAGCGCTCTTCTTCACGTTGCATCTGTGGAGGGACC
TAGGGATCTTACCAGCCATGAGCATCGGCTTTGCAGGACCTTTTATCGGT
GATGAGGACTTCACCGACGCCTACCAAGAGCCGCTTAAGCACCTCATGGG
CGACCAGTGGTGGCAGGGCCTGGCCATCCACGACAGCCGGCAGATGGTTC
CTTGCAAGTTTCTCCACCGGGGCAACTGCACCGGTCGGGTCCACAGGAGG
TTCCAACGGGCATTCCTGGAGTACCAGACACGGATGCGTATTTACCAATC
TAAGGCAGATAGCAACGTGGTCGTCCTTTCATTTCGTCCGACTCAACAGA
ATACTGAGATGAAGCTCTCATTCGCCCTTGTTCTCTGCATTTACCTACCT
GTGGTACTCCTGGCCTTGCCTGCTCAAGAATGTCCTCCTGGTTTTGGCAC
CTCGGGATGGGTCAACGACATGGGGTTTCTGGCTGATGCGGTCTCGATGG
GGGGGCCCGATTTCAAGGACGACTCCCAAGGTGTGTGTGGGACGTATAAA
GTGATCAAGACGTGCGAAGCGCAG back to top
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