|
Properties
Property Name | Value |
TranscriptId | 633673 |
Track | FilteredModels2 |
ProteinId | 633587 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_38 | supercontig | scaffold_38:132638..133614 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9691 ID=mRNA_9691|Name=jgi.p|Nanoce1779_2|633587|organism=Nannochloropsis oceanica|type=mRNA|length=771bp GGAGGGGTGCCTGAGGAGGGGTTGAGTGTGGAAGAGAAAATTCAGTTGAG CATGGCACAGGGGGATTTTGACGATTTAAAAGGCAAGGGAAAGCCGTTGG AGAAATTCGACGTTCATCATTATGCGACGGACAAAACCAGCGCCACCTAC ATGGACGTGCTAGCCAAGTCAGGCGTGAAGCCCGTGTGGATTGAGAGGTC CCTCCGGATAAAGGAGGCAGAGAAAAGGGTGTTGAAGAGATTGGAGGGAG AGTGGGCCAAGGTGGTGTTGGAGATTTGGGAAGAGGAGGAGAAGGGAAAA GGGAAGGGAGGGAGGGCGGGAGGGAGGTCACAGTGGAGGGAGAGGGTCCT GGGGATGAGGTGTTTGAGGGAGGACTTGGCCTGGGTGAATGCGGAGATTG ATTTGTATAATCTACAGGTGCCCTCCATGTCCTTACAGCGAATGAGATTA AAGCTGGACCATTTGTGTGAGGCAGTGGAGGAGCGAGTGGGGGGAGGGGG GGGGTGGATGGACAAGACCACGGCAAGGGCTGTAGTGAGAGAGGGGGAGA AGGAAGGGATGTTCAGTAATGTGACAGCGCTGGGCTCGTTGCGGCTAGAG GCGGAGGAGCTGAAGAAAACCAAGAGGAAAGATGGGAAGGGCAGTGGTGG GGGATCGGACATCTGGGGTGGAGGTGGAAGCCCAAGCGGGGCCAAGGCGG GGGCAGGAAGAGGAGGGGGGATGCTCGATACGATAACCTCGTGGTTCTCG ATGGGCCAAACAAAGCCATGA back to topprotein sequence of jgi.p|Nanoce1779_2|633587 >mRNA_9691-protein ID=mRNA_9691-protein|Name=jgi.p|Nanoce1779_2|633587|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp MAQGDFDDLKGKGKPLEKFDVHHYATDKTSATYMDVLAKSGVKPVWIERS LRIKEAEKRVLKRLEGEWAKVVLEIWEEEEKGKGKGGRAGGRSQWRERVL GMRCLREDLAWVNAEIDLYNLQVPSMSLQRMRLKLDHLCEAVEERVGGGG GWMDKTTARAVVREGEKEGMFSNVTALGSLRLEAEELKKTKRKDGKGSGG GSDIWGGGGSPSGAKAGAGRGGGMLDTITSWFSMGQTKP* back to topmRNA from alignment at scaffold_38:132638..133614+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9691 ID=mRNA_9691|Name=jgi.p|Nanoce1779_2|633587|organism=Nannochloropsis oceanica|type=mRNA|length=977bp|location=Sequence derived from alignment at scaffold_38:132638..133614+ (Nannochloropsis oceanica) GGAGGGGTGCCTGAGGAGGGGTTGAGTGTGGAAGAGAAAATTCAGTTGAG
CATGGCACAGGGGGATTTTGACGATTTAAAAGGCAAGGGAAAGCCGTTGG
AGAAATTCGACGGTACGTCTGGTTGAAAGATGGGAGGAGAGGGAGGGCGG
GAGGGAGGGAGGAAGACAGGAATAATTGTTTCTAGGTTCTGTTGTTTGCT
CTCCTCGAGTGGTGGTGCAGTGGGATGCCGTTCCTTTCTTTTACCCTTCA
AAATTTGATTTCTGCGTTGTCAACTCAATTTCCCCTTCCTCTCTCCCTCC
CTCCCTCCCTTCCCTCAGTTCATCATTATGCGACGGACAAAACCAGCGCC
ACCTACATGGACGTGCTAGCCAAGTCAGGCGTGAAGCCCGTGTGGATTGA
GAGGTCCCTCCGGATAAAGGAGGCAGAGAAAAGGGTGTTGAAGAGATTGG
AGGGAGAGTGGGCCAAGGTGGTGTTGGAGATTTGGGAAGAGGAGGAGAAG
GGAAAAGGGAAGGGAGGGAGGGCGGGAGGGAGGTCACAGTGGAGGGAGAG
GGTCCTGGGGATGAGGTGTTTGAGGGAGGACTTGGCCTGGGTGAATGCGG
AGATTGATTTGTATAATCTACAGGTGCCCTCCATGTCCTTACAGCGAATG
AGATTAAAGCTGGACCATTTGTGTGAGGCAGTGGAGGAGCGAGTGGGGGG
AGGGGGGGGGTGGATGGACAAGACCACGGCAAGGGCTGTAGTGAGAGAGG
GGGAGAAGGAAGGGATGTTCAGTAATGTGACAGCGCTGGGCTCGTTGCGG
CTAGAGGCGGAGGAGCTGAAGAAAACCAAGAGGAAAGATGGGAAGGGCAG
TGGTGGGGGATCGGACATCTGGGGTGGAGGTGGAAGCCCAAGCGGGGCCA
AGGCGGGGGCAGGAAGAGGAGGGGGGATGCTCGATACGATAACCTCGTGG
TTCTCGATGGGCCAAACAAAGCCATGA back to topCoding sequence (CDS) from alignment at scaffold_38:132638..133614+ >mRNA_9691 ID=mRNA_9691|Name=jgi.p|Nanoce1779_2|633587|organism=Nannochloropsis oceanica|type=CDS|length=1440bp|location=Sequence derived from alignment at scaffold_38:132638..133614+ (Nannochloropsis oceanica) ATGGCACAGGGGGATTTTGACGATTTAAAAGGCAAGGGAAAGCCGTTGGA GAAATTCGACGTTCATCATTATGCGACGGACAAAACCAGCGCCACCTACA TGGACGTGCTAGCCAAGTCAGGCGTGAAGCCCGTGTGGATTGAGAGGTCC CTCCGGATAAAGGAGGCAGAGAAAAGGGTGTTGAAGAGATTGGAGGGAGA GTGGGCCAAGGTGGTGTTGGAGATTTGGGAAGAGGAGGAGAAGGGAAAAG GGAAGGGAGGGAGGGCGGGAGGGAGGTCACAGTGGAGGGAGAGGGTCCTG GGGATGAGGTGTTTGAGGGAGGACTTGGCCTGGGTGAATGCGGAGATTGA TTTGTATAATCTACAGGTGCCCTCCATGTCCTTACAGCGAATGAGATTAA AGCTGGACCATTTGTGTGAGGCAGTGGAGGAGCGAGTGGGGGGAGGGGGG GGGTGGATGGACAAGACCACGGCAAGGGCTGTAGTGAGAGAGGGGGAGAA GGAAGGGATGTTCAGTAATGTGACAGCGCTGGGCTCGTTGCGGCTAGAGG CGGAGGAGCTGAAGAAAACCAAGAGGAAAGATGGGAAGGGCAGTGGTGGG GGATCGGACATCTGGGGTGGAGGTGGAAGCCCAAGCGGGGCCAAGGCGGG GGCAGGAAGAGGAGGGGGGATGCTCGATACGATAACCTCGTGGTTCTCGA TGGGCCAAACAAAGCCATGAATGGCACAGGGGGATTTTGACGATTTAAAA GGCAAGGGAAAGCCGTTGGAGAAATTCGACGTTCATCATTATGCGACGGA CAAAACCAGCGCCACCTACATGGACGTGCTAGCCAAGTCAGGCGTGAAGC CCGTGTGGATTGAGAGGTCCCTCCGGATAAAGGAGGCAGAGAAAAGGGTG TTGAAGAGATTGGAGGGAGAGTGGGCCAAGGTGGTGTTGGAGATTTGGGA AGAGGAGGAGAAGGGAAAAGGGAAGGGAGGGAGGGCGGGAGGGAGGTCAC AGTGGAGGGAGAGGGTCCTGGGGATGAGGTGTTTGAGGGAGGACTTGGCC TGGGTGAATGCGGAGATTGATTTGTATAATCTACAGGTGCCCTCCATGTC CTTACAGCGAATGAGATTAAAGCTGGACCATTTGTGTGAGGCAGTGGAGG AGCGAGTGGGGGGAGGGGGGGGGTGGATGGACAAGACCACGGCAAGGGCT GTAGTGAGAGAGGGGGAGAAGGAAGGGATGTTCAGTAATGTGACAGCGCT GGGCTCGTTGCGGCTAGAGGCGGAGGAGCTGAAGAAAACCAAGAGGAAAG ATGGGAAGGGCAGTGGTGGGGGATCGGACATCTGGGGTGGAGGTGGAAGC CCAAGCGGGGCCAAGGCGGGGGCAGGAAGAGGAGGGGGGATGCTCGATAC GATAACCTCGTGGTTCTCGATGGGCCAAACAAAGCCATGA back to top
|