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Properties
| Property Name | Value |
|---|
| TranscriptId | 609549 |
| Track | FilteredModels2 |
| ProteinId | 609463 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:124914..126363 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9878 ID=mRNA_9878|Name=jgi.p|Nanoce1779_2|609463|organism=Nannochloropsis oceanica|type=mRNA|length=1012bp
AGGCGACACAAGGAGGAGCGAGCGTCCCGCCAACGGCTGGCTTTGGCCAA
CTGTTTTTTGTCAGTTGAGATGGGCCTGGTGGGTCCGAAAATTTCAAGCT
TTTAGCTGTACACAGAGAGTGTGAAACACGTGACGAGCTGATAAAAGAAG
CACAGATGGTTTAAGGTCGAGGTGGGGGGACATATCCGACCCTCACACAC
GCCAAAGAGGTCCGAAAGAGTGGTGAGTGTATTCATTGTTCGCGCAAAAT
CTGAATATACTCTTGTAACAGAGGAGTCTCTGTGTGATCTTATGGGGCCG
AGAGTGTATGCATAAGACTTGCATGCGGTATTTTGCCTCAAAGGGGTCTG
TTGAAAGTGCAGGGAAAAGCGAGACAACAAGGACAAGGAAATACACGGAA
ACACCAAAGTACGCTTTTAAAAAATCCCCCCCTTTTATGAGTGGTCTGTC
CACCGCTATTTCTTCTCTTTTGTTCTTGTTTGCTCTTTCAATTTAAGCAT
GTCTTTGTATGCTAAATTTCGTTGTGTCTCACTACTTGCGTGTGGGCTGG
GCATGGCGTTTGGCCGCGAAAACGGAATGGAAAAGACGGGAGGCCATGAG
AGGGTCCACACCGAACTCGGCGGGGTGTGTCGCAATGCGATAGGCAGCCT
TAACGATGGCGGCGGCTTCTTCCTTCCTCGTCATGGTCACTCGAGCAAGA
ATATCCTGTGTTTTCTTGTGGAGGGCTTCTTGGGCTTGCACCCACTTAAT
GTCCGACCGAGGGGTAGGGTAAAGTTTGTCCTGCAACAGGTCTTGGGGAA
TCCGGAAGGCATATGCGGCGCCGCTTCGGATACACATGAGTGGCACACGC
TCTCCCTTCTTAAATGAGGCCTCGGGCAGATACGACACCGCGTATTTCCA
ATGCGTCTCCCTCGAGTCTAGCACCGTCTCCCCCCTCCTCCCTCCCTCCC
TCCGTCCTCCCGAGGAAGGACAAGGCGGACCCTCGTCCTCGCCCTCCGTC
CCTTCCTCGTCC back to topprotein sequence of jgi.p|Nanoce1779_2|609463 >mRNA_9878-protein ID=mRNA_9878-protein|Name=jgi.p|Nanoce1779_2|609463|organism=Nannochloropsis oceanica|type=polypeptide|length=121bp
MSLYAKFRCVSLLACGLGMAFGRENGMEKTGGHERVHTELGGVCRNAIGS
LNDGGGFFLPRHGHSSKNILCFLVEGFLGLHPLNVRPRGRVKFVLQQVLG
NPEGICGAASDTHEWHTLSLL back to topmRNA from alignment at scaffold_45:124914..126363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9878 ID=mRNA_9878|Name=jgi.p|Nanoce1779_2|609463|organism=Nannochloropsis oceanica|type=mRNA|length=1450bp|location=Sequence derived from alignment at scaffold_45:124914..126363- (Nannochloropsis oceanica)
AGGCGACACAAGGAGGAGCGAGCGTCCCGCCAACGGCTGGCTTTGGCCAA
CTGTTTTTTGTCAGTTGAGATGGGCCTGGTGGGTCCGAAAATTTCAAGCT
TTTAGCTGTACACAGAGAGTGTGAAACACGTGACGAGCTGATAAAAGAAG
CACAGATGGTTTAAGGTCGAGGTGGGGGGACATATCCGACCCTCACACAC
GCCAAAGAGGTCCGAAAGAGTGGTGAGTGTATTCATTGTTCGCGCAAAAT
CTGAATATACTCTTGTAACAGAGGAGTCTCTGTGTGATCTTATGGGGCCG
AGAGTGTATGCATAAGACTTGCATGCGGTATTTTGCCTCAAAGGGGTCTG
TTGAAAGTGCAGGGAAAAGCGAGACAACAAGGACAAGGAAATACACGGAA
ACACCAAAGTACGCTTTTAAAAAATCCCCCCCTTTTATGAGTGGTCTGTC
CACCGCTATTTCTTCTCTTTTGTTCTTGTTTGCTCTTTCAATTTAAGCAT
GTCTTTGTATGCTAAATTTCGTTGTGTCTCACTACTTGCGTGTGGGCTGG
GCATGGCGTTTGGCCGCGAAAACGGAATGGAAAAGACGGGAGGCCATGAG
AGGGTCCACACCTTTTTGATGGGGAAGGAGGAAGGGAGGGAGGGACAAGA
TAAGGATCGTACGTAAGTAAATGAAAGAAAGGATGAGAATTACATGATGT
GATGCTTTTGCGTTTTCTGATATATTGCTCCCTCCTTCCCTCCCTTCTTC
CCTCCCTCGTACCGAACTCGGCGGGGTGTGTCGCAATGCGATAGGCAGCC
TTAACGATGGCGGCGGCTTCTTCCTTCCTCGTCATGGTCACTCTGTGCAG
GGAAGGGAGGGGGGGAGGATGGGAGTGAGGGAGGAAGGGGGGGCTGAGGG
TTGAATGTAGACCGAGGGAGGGGGAGGGTGGGAGAGAGGGAGGGAGCACA
AGGGGCGTACCGAGCAAGAATATCCTGTGTTTTCTTGTGGAGGGCTTCTT
GGGCTTGCACCCACTTAATGTCCGACCGAGGGGTAGGGTAAAGTTTGTCC
TGCAACAGGTCTTGGGGAATCCGGAAGGCATATGCGGCGCCTGCCGGGTC
GGCAGGGAAAGGAAAGAGGGAGGGAGGGAGGGAAGGGGGGAGGAGAAGAT
TTATTGCACCATAATGTCTTGCCTAGAGAAAAAAGGTAGGACTTGGTGGT
GGTTGGTTGATGGCAAATGAACCCTCCCTCCCTCCCTCCCTCCCTCTCTC
CCTTCCTACCGCTTCGGATACACATGAGTGGCACACGCTCTCCCTTCTTA
AATGAGGCCTCGGGCAGATACGACACCGCGTATTTCCAATGCGTCTCCCT
CGAGTCTAGCACCGTCTCCCCCCTCCTCCCTCCCTCCCTCCGTCCTCCCG
AGGAAGGACAAGGCGGACCCTCGTCCTCGCCCTCCGTCCCTTCCTCGTCC
back to topCoding sequence (CDS) from alignment at scaffold_45:124914..126363- >mRNA_9878 ID=mRNA_9878|Name=jgi.p|Nanoce1779_2|609463|organism=Nannochloropsis oceanica|type=CDS|length=1460bp|location=Sequence derived from alignment at scaffold_45:124914..126363- (Nannochloropsis oceanica)
CGCTTCGGATACACATGAGTGGCACACGCTCTCCCTTCTTAACGAGCAAG
AATATCCTGTGTTTTCTTGTGGAGGGCTTCTTGGGCTTGCACCCACTTAA
TGTCCGACCGAGGGGTAGGGTAAAGTTTGTCCTGCAACAGGTCTTGGGGA
ATCCGGAAGGCATATGCGGCGCCGAACTCGGCGGGGTGTGTCGCAATGCG
ATAGGCAGCCTTAACGATGGCGGCGGCTTCTTCCTTCCTCGTCATGGTCA
CTATGTCTTTGTATGCTAAATTTCGTTGTGTCTCACTACTTGCGTGTGGG
CTGGGCATGGCGTTTGGCCGCGAAAACGGAATGGAAAAGACGGGAGGCCA
TGAGAGGGTCCACACCGCTTCGGATACACATGAGTGGCACACGCTCTCCC
TTCTTAACGAGCAAGAATATCCTGTGTTTTCTTGTGGAGGGCTTCTTGGG
CTTGCACCCACTTAATGTCCGACCGAGGGGTAGGGTAAAGTTTGTCCTGC
AACAGGTCTTGGGGAATCCGGAAGGCATATGCGGCGCCGAACTCGGCGGG
GTGTGTCGCAATGCGATAGGCAGCCTTAACGATGGCGGCGGCTTCTTCCT
TCCTCGTCATGGTCACTATGTCTTTGTATGCTAAATTTCGTTGTGTCTCA
CTACTTGCGTGTGGGCTGGGCATGGCGTTTGGCCGCGAAAACGGAATGGA
AAAGACGGGAGGCCATGAGAGGGTCCACACCGCTTCGGATACACATGAGT
GGCACACGCTCTCCCTTCTTAACGAGCAAGAATATCCTGTGTTTTCTTGT
GGAGGGCTTCTTGGGCTTGCACCCACTTAATGTCCGACCGAGGGGTAGGG
TAAAGTTTGTCCTGCAACAGGTCTTGGGGAATCCGGAAGGCATATGCGGC
GCCGAACTCGGCGGGGTGTGTCGCAATGCGATAGGCAGCCTTAACGATGG
CGGCGGCTTCTTCCTTCCTCGTCATGGTCACTATGTCTTTGTATGCTAAA
TTTCGTTGTGTCTCACTACTTGCGTGTGGGCTGGGCATGGCGTTTGGCCG
CGAAAACGGAATGGAAAAGACGGGAGGCCATGAGAGGGTCCACACCGCTT
CGGATACACATGAGTGGCACACGCTCTCCCTTCTTAACGAGCAAGAATAT
CCTGTGTTTTCTTGTGGAGGGCTTCTTGGGCTTGCACCCACTTAATGTCC
GACCGAGGGGTAGGGTAAAGTTTGTCCTGCAACAGGTCTTGGGGAATCCG
GAAGGCATATGCGGCGCCGAACTCGGCGGGGTGTGTCGCAATGCGATAGG
CAGCCTTAACGATGGCGGCGGCTTCTTCCTTCCTCGTCATGGTCACTATG
TCTTTGTATGCTAAATTTCGTTGTGTCTCACTACTTGCGTGTGGGCTGGG
CATGGCGTTTGGCCGCGAAAACGGAATGGAAAAGACGGGAGGCCATGAGA
GGGTCCACAC back to top
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