|
Properties
Property Name | Value |
TranscriptId | 84425 |
Track | FilteredModels2 |
ProteinId | 84339 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_14 | supercontig | scaffold_14:751088..752515 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6188 ID=mRNA_6188|Name=jgi.p|Nanoce1779_2|84339|organism=Nannochloropsis oceanica|type=mRNA|length=796bp CCTCCTTCCCTCCCACCCTCCCTCCCAGCGACCAAGGAGCAGGAGGAGGT GGAGTACATCGGGTGTTTCTCGTCCGAGAGCATGTTCCTCGGCAGGGAAT ACACGGGCGGGGCCGCTGGCGCCAACTTCAACTTGATGCGTCATGTCGCC TCCCAAAAAGGGAAACGATTTTTTTCCATGGCTCGTGGTGGGCCTGACGG CCACGGCTACGTCTTCGACGACCTCGACCACCGAGGCCACCCTCACGGTG ACATGTACGGGGAGGGCTGCGAGCGCACTTGTGCCGATGAGTCTCAGGCG TTCTGTGGCTGCATGGATGACTTCTGTGCAGGACCTCCGGCGCCAGGAGA GGAGCACAATCGCCGATGGGCCGTGTATGAGATGAAGGGGACAAGAGGTC AGCTTAGAGGCAGTCCGCGTAGGCGCTTTCGGTCTCTCGGGTGGTCTAAA AGGAGGGAAAGAGAAGGGAAAAGGAGACAACCTGGGAAGACGAAAAGGAA GATTATTGGAATGGTGGAAGTGAGGAGGGAGCAGTTGTCAGGAAAGGAAG GATGGGAGGGAGAGAGGGAGGGAAGGAGGGAGGAAGGGAGGGAGAGAGGA TTTCTTCTAGTTTGCCCATTTTTTGATAGCTTGTGCTTTAAGCTTCTCTC TCATCCCTTCGTTTGCGTTGGAGGTGAGAGATGGTGAGAGAGAGCGGGAG GGAAAGAGAACATAAAGCTTGAAGGTGAGGCGTAGGTGCACAGAAAGGAG TGGGAAAGAGAAGGAAGAGAAATTGGAAGAGGAAGCAGGAGGACAA back to topprotein sequence of jgi.p|Nanoce1779_2|84339 >mRNA_6188-protein ID=mRNA_6188-protein|Name=jgi.p|Nanoce1779_2|84339|organism=Nannochloropsis oceanica|type=polypeptide|length=202bp MFLGREYTGGAAGANFNLMRHVASQKGKRFFSMARGGPDGHGYVFDDLDH RGHPHGDMYGEGCERTCADESQAFCGCMDDFCAGPPAPGEEHNRRWAVYE MKGTRGQLRGSPRRRFRSLGWSKRREREGKRRQPGKTKRKIIGMVEVRRE QLSGKEGWEGEREGRREEGRERGFLLVCPFFDSLCFKLLSHPFVCVGGER W* back to topmRNA from alignment at scaffold_14:751088..752515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6188 ID=mRNA_6188|Name=jgi.p|Nanoce1779_2|84339|organism=Nannochloropsis oceanica|type=mRNA|length=1428bp|location=Sequence derived from alignment at scaffold_14:751088..752515- (Nannochloropsis oceanica) CCTCCTTCCCTCCCACCCTCCCTCCCAGCGACCAAGGAGCAGGAGGAGGT
GGAGTACATCGGGTGTTTCTCGTCCGAGAGCATGTTCCTCGGCAGGGAAT
ACACGGGCGGGGCCGCTGGCGCCAACTTCAACTTGATGCGTCATGTCGCC
TCCCAAAAAGGGAAACGGTGAGCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTTCCTTCCTGCCTTCCTTTCCGTCTGTTCTGATGT
GCGCGGTTGCATTTCTCCTCTTCCCTTCCATGCTTTCAGCATTCATCCTC
CCTCCCTTCCTCCCTCCCTCCAGATTTTTTTCCATGGCTCGTGGTGGGCC
TGACGGCCACGGCTACGTCTTCGACGACCTCGACCACCGAGGCCACCCTC
ACGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAG
GGTAGGATACATATGCAAACAGGCAAGAAGGATTTAATATAAATAAGCTC
ACAGGCTTAGGTTCCATACCCTCCCTCTCATATCCCTCCCTCCTTGTCAT
TTCCCCTATCGTTTTCCTCTTTCTGTAAAATTTATAAATATATCACAACT
CATATTAATCTATATACCTACCTATTATATTAATTTACACCCACCTATTA
CTAGGGTGACATGTACGGGGAGGGCTGCGAGCGCACTTGTGCCGATGAGT
CTCAGGCGTTCTGTGGCTGCATGGATGACTTCTGTGCAGGTACGTCCCCC
CCTCCCTCCCTCCCTCCCCTCCTCAATTCGTGATATCCAATTCGCCCTGT
AAGATTATTGACATTGAGCGTCCTCCCTCTCTCCCTCTCTCCCTCCCTCC
CTCCTTTCCTCCCTCTCTCCCTCCTTCCCTCCCTTCCTACCTCAGGACCT
CCGGCGCCAGGAGAGGAGCACAATCGCCGATGGGCCGTGTATGAGATGAA
GGGGAAGAAGAGAGGGAAGAAGGGAGGGAAGAGAAAGTCATCGTAAGCTC
TACGTGTGGGATGAAGGGAAGGACAAGAGGTCAGCTTAGAGGCAGTCCGC
GTAGGCGCTTTCGGTCTCTCGGGTGGTCTAAAAGGAGGGAAAGAGAAGGG
AAAAGGAGACAACCTGGGAAGACGAAAAGGAAGATTATTGGAATGGTGGA
AGTGAGGAGGGAGCAGTTGTCAGGAAAGGAAGGATGGGAGGGAGAGAGGG
AGGGAAGGAGGGAGGAAGGGAGGGAGAGAGGATTTCTTCTAGTTTGCCCA
TTTTTTGATAGCTTGTGCTTTAAGCTTCTCTCTCATCCCTTCGTTTGCGT
TGGAGGTGAGAGATGGTGAGAGAGAGCGGGAGGGAAAGAGAACATAAAGC
TTGAAGGTGAGGCGTAGGTGCACAGAAAGGAGTGGGAAAGAGAAGGAAGA
GAAATTGGAAGAGGAAGCAGGAGGACAA back to topCoding sequence (CDS) from alignment at scaffold_14:751088..752515- >mRNA_6188 ID=mRNA_6188|Name=jgi.p|Nanoce1779_2|84339|organism=Nannochloropsis oceanica|type=CDS|length=3030bp|location=Sequence derived from alignment at scaffold_14:751088..752515- (Nannochloropsis oceanica) GACAAGAGGTCAGCTTAGAGGCAGTCCGCGTAGGCGCTTTCGGTCTCTCG GGTGGTCTAAAAGGAGGGAAAGAGAAGGGAAAAGGAGACAACCTGGGAAG ACGAAAAGGAAGATTATTGGAATGGTGGAAGTGAGGAGGGAGCAGTTGTC AGGAAAGGAAGGATGGGAGGGAGAGAGGGAGGGAAGGAGGGAGGAAGGGA GGGAGAGAGGATTTCTTCTAGTTTGCCCATTTTTTGATAGCTTGTGCTTT AAGCTTCTCTCTCATCCCTTCGTTTGCGTTGGAGGTGAGAGATGGTGAGA CCTCCGGCGCCAGGAGAGGAGCACAATCGCCGATGGGCCGTGTATGAGAT GAAGGGGGTGACATGTACGGGGAGGGCTGCGAGCGCACTTGTGCCGATGA GTCTCAGGCGTTCTGTGGCTGCATGGATGACTTCTGTGCAGATTTTTTTC CATGGCTCGTGGTGGGCCTGACGGCCACGGCTACGTCTTCGACGACCTCG ACCACCGAGGCCACCCTCACATGTTCCTCGGCAGGGAATACACGGGCGGG GCCGCTGGCGCCAACTTCAACTTGATGCGTCATGTCGCCTCCCAAAAAGG GAAACGGACAAGAGGTCAGCTTAGAGGCAGTCCGCGTAGGCGCTTTCGGT CTCTCGGGTGGTCTAAAAGGAGGGAAAGAGAAGGGAAAAGGAGACAACCT GGGAAGACGAAAAGGAAGATTATTGGAATGGTGGAAGTGAGGAGGGAGCA GTTGTCAGGAAAGGAAGGATGGGAGGGAGAGAGGGAGGGAAGGAGGGAGG AAGGGAGGGAGAGAGGATTTCTTCTAGTTTGCCCATTTTTTGATAGCTTG TGCTTTAAGCTTCTCTCTCATCCCTTCGTTTGCGTTGGAGGTGAGAGATG GTGAGACCTCCGGCGCCAGGAGAGGAGCACAATCGCCGATGGGCCGTGTA TGAGATGAAGGGGGTGACATGTACGGGGAGGGCTGCGAGCGCACTTGTGC CGATGAGTCTCAGGCGTTCTGTGGCTGCATGGATGACTTCTGTGCAGATT TTTTTCCATGGCTCGTGGTGGGCCTGACGGCCACGGCTACGTCTTCGACG ACCTCGACCACCGAGGCCACCCTCACATGTTCCTCGGCAGGGAATACACG GGCGGGGCCGCTGGCGCCAACTTCAACTTGATGCGTCATGTCGCCTCCCA AAAAGGGAAACGGACAAGAGGTCAGCTTAGAGGCAGTCCGCGTAGGCGCT TTCGGTCTCTCGGGTGGTCTAAAAGGAGGGAAAGAGAAGGGAAAAGGAGA CAACCTGGGAAGACGAAAAGGAAGATTATTGGAATGGTGGAAGTGAGGAG GGAGCAGTTGTCAGGAAAGGAAGGATGGGAGGGAGAGAGGGAGGGAAGGA GGGAGGAAGGGAGGGAGAGAGGATTTCTTCTAGTTTGCCCATTTTTTGAT AGCTTGTGCTTTAAGCTTCTCTCTCATCCCTTCGTTTGCGTTGGAGGTGA GAGATGGTGAGACCTCCGGCGCCAGGAGAGGAGCACAATCGCCGATGGGC CGTGTATGAGATGAAGGGGGTGACATGTACGGGGAGGGCTGCGAGCGCAC TTGTGCCGATGAGTCTCAGGCGTTCTGTGGCTGCATGGATGACTTCTGTG CAGATTTTTTTCCATGGCTCGTGGTGGGCCTGACGGCCACGGCTACGTCT TCGACGACCTCGACCACCGAGGCCACCCTCACATGTTCCTCGGCAGGGAA TACACGGGCGGGGCCGCTGGCGCCAACTTCAACTTGATGCGTCATGTCGC CTCCCAAAAAGGGAAACGGACAAGAGGTCAGCTTAGAGGCAGTCCGCGTA GGCGCTTTCGGTCTCTCGGGTGGTCTAAAAGGAGGGAAAGAGAAGGGAAA AGGAGACAACCTGGGAAGACGAAAAGGAAGATTATTGGAATGGTGGAAGT GAGGAGGGAGCAGTTGTCAGGAAAGGAAGGATGGGAGGGAGAGAGGGAGG GAAGGAGGGAGGAAGGGAGGGAGAGAGGATTTCTTCTAGTTTGCCCATTT TTTGATAGCTTGTGCTTTAAGCTTCTCTCTCATCCCTTCGTTTGCGTTGG AGGTGAGAGATGGTGAGACCTCCGGCGCCAGGAGAGGAGCACAATCGCCG ATGGGCCGTGTATGAGATGAAGGGGGTGACATGTACGGGGAGGGCTGCGA GCGCACTTGTGCCGATGAGTCTCAGGCGTTCTGTGGCTGCATGGATGACT TCTGTGCAGATTTTTTTCCATGGCTCGTGGTGGGCCTGACGGCCACGGCT ACGTCTTCGACGACCTCGACCACCGAGGCCACCCTCACATGTTCCTCGGC AGGGAATACACGGGCGGGGCCGCTGGCGCCAACTTCAACTTGATGCGTCA TGTCGCCTCCCAAAAAGGGAAACGGACAAGAGGTCAGCTTAGAGGCAGTC CGCGTAGGCGCTTTCGGTCTCTCGGGTGGTCTAAAAGGAGGGAAAGAGAA GGGAAAAGGAGACAACCTGGGAAGACGAAAAGGAAGATTATTGGAATGGT GGAAGTGAGGAGGGAGCAGTTGTCAGGAAAGGAAGGATGGGAGGGAGAGA GGGAGGGAAGGAGGGAGGAAGGGAGGGAGAGAGGATTTCTTCTAGTTTGC CCATTTTTTGATAGCTTGTGCTTTAAGCTTCTCTCTCATCCCTTCGTTTG CGTTGGAGGTGAGAGATGGTGAGACCTCCGGCGCCAGGAGAGGAGCACAA TCGCCGATGGGCCGTGTATGAGATGAAGGGGGTGACATGTACGGGGAGGG CTGCGAGCGCACTTGTGCCGATGAGTCTCAGGCGTTCTGTGGCTGCATGG ATGACTTCTGTGCAGATTTTTTTCCATGGCTCGTGGTGGGCCTGACGGCC ACGGCTACGTCTTCGACGACCTCGACCACCGAGGCCACCCTCACATGTTC CTCGGCAGGGAATACACGGGCGGGGCCGCTGGCGCCAACTTCAACTTGAT GCGTCATGTCGCCTCCCAAAAAGGGAAACG back to top
|