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Properties
| Property Name | Value |
|---|
| TranscriptId | 593621 |
| Track | FilteredModels2 |
| ProteinId | 593535 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:359968..361877 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6031 ID=mRNA_6031|Name=jgi.p|Nanoce1779_2|593535|organism=Nannochloropsis oceanica|type=mRNA|length=1439bp
GTGCATGGGCCAGGTTGCTTTTCCTTCTTTCTGTGGCCCGCGTGGACATA
TGCGTGGAGGGAAGCAAGATGAAGAGGCGATCAAGCAAGGAGGGGTAGAG
ATCTCCTTGACCTACTTTGTTTGCCTTTCCACCCCATCCCATCTGACACG
TAAACACTCCATTTGTTGGATGAATTCCTTCACCTTTCACGTTGTTGCTG
CACACATCTTTTCGTACGCCTTCAGCCTATCCTGTCGGCAGTCATCTCCC
ACAACTCTTTCCACCGAGCAGGAAGCAAGCAACCAAGAGGGAGCAGTTGG
AAACGACTATGGATACCTCAGTCAAGGAAGCACTCGGGCCCGGACAAGAA
GGCACGGCGTATGTGGGGATCTGAGTACAGCAATATCATGGAGAACGGTG
CTTATGGTGCGGGGCGGGGCCTTGCGGTGGCCAACCCAAACATGGACGCA
AGAAATGCGTAGTGGAATGCTTGCAAGAGGAAGGCCCTGCTTCGACCCTG
TCGTCGTCGTCGTGTCCCCTGGACACGCAAAATGCACCGCAGTCATTTTC
ACCTCATTTACGTCTCTTCCTCTACGTATTCTTCCCTTCATTAAACACAG
TCCCTTCACCTTCATCTTCTAAGCCATGCGAACCACCGCCTGCCTGCTCG
CCGGCCTCGGCCTCACCCAAGCCTTCCTGGCCCCTACCCTCCCCAGCGCC
CGCTCCTTCAGCCGCAACGCCGTGACCATGAAGTTGGGCTCTTCCGCAGA
GGGCCTCGTCGGCAGCGACATCGAGTTCCCCGAGTTTGACCCTCTGGGCT
TCACCAACAACCCCAAGCCCGAGACTCTTGACTGGTACCGTGCCGCTGAG
CTCAAGCACGGGCGCGTGGCCATGCTTGCCGCCCTCGGCCAGATCGTGCA
ACACTTCTACACCCTGCCCGATGCCTCGGGCGTCTTCTCCGCCGGCGATC
GACCCTTTGAGGCCTTGAACAAGGTGGTGAATGAGCGCCCGTTGGCGGCG
ATCCAGATTGGCCTGGCGATTTTCGCGGTGGAGGCGCTGGGGCAATTTAA
CCAGGCCAAGCCTGGGCAGGCCCCTGGGGACCTCGGCTGGGACCCCCTTA
ACTTGAAGAGCGATGACCCCGAGATCTACGAGAAGGTGCAAAAGCGCGAG
TTGAAGAATGGACGCTTGGCCATGATTGCGATTGCCGGCATGCTTGTGCA
GGAGAACCTGACGGGCCTCGGGGTGATTGAGCAATGGGGTACGTCATGCA
GTCAATTGGGAGGGAACGAAGAAGAAAGAGGCGAGAAGAAAGGATCGATG
GACGAAGAGAAGATCCGAAAAGAGTCCCAGAAATCGTGGATGAGAGGGCA
TGGCATGGCTCAAAACGATCACTTCTCGACCCTCCCTCCCGCCCTCCCTC
TCCTTCCCACCTCACAGTCAAGGGCGACATCAACCCCTT back to topprotein sequence of jgi.p|Nanoce1779_2|593535 >mRNA_6031-protein ID=mRNA_6031-protein|Name=jgi.p|Nanoce1779_2|593535|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MGQVAFPSFCGPRGHMRGGKQDEEAIKQGGVEISLTYFVCLSTPSHLTRK
HSICWMNSFTFHVVAAHIFSYAFSLSCRQSSPTTLSTEQEASNQEGAVGN
DYGYLSQGSTRARTRRHGVCGDLSTAISWRTVLMVRGGALRWPTQTWTQE
MRSGMLARGRPCFDPVVVVVSPGHAKCTAVIFTSFTSLPLRILPFIKHSP
FTFIF* back to topmRNA from alignment at scaffold_14:359968..361877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6031 ID=mRNA_6031|Name=jgi.p|Nanoce1779_2|593535|organism=Nannochloropsis oceanica|type=mRNA|length=1910bp|location=Sequence derived from alignment at scaffold_14:359968..361877- (Nannochloropsis oceanica)
GTGCATGGGCCAGGTTGCTTTTCCTTCTTTCTGTGGCCCGCGTGGACATA
TGCGTGGAGGGAAGCAAGATGAAGAGGCGATCAAGCAAGGAGGGGTAGAG
ATCTCCTTGACCTACTTTGTTTGCCTTTCCACCCCATCCCATCTGACACG
TAAACACTCCATTTGTTGGATGAATTCCTTCACCTTTCACGTTGTTGCTG
CACACATCTTTTCGTACGCCTTCAGCCTATCCTGTCGGCAGTCATCTCCC
ACAACTCTTTCCACCGAGCAGGAAGCAAGCAACCAAGAGGGAGCAGTTGG
AAACGACTATGGATACCTCAGTCAAGGAAGCACTCGGGCCCGGACAAGAA
GGCACGGCGTATGTGGGGATCTGAGTACAGCAATATCATGGAGAACGGTG
CTTATGGTGCGGGGCGGGGCCTTGCGGTGGCCAACCCAAACATGGACGCA
AGAAATGCGTAGTGGAATGCTTGCAAGAGGAAGGCCCTGCTTCGACCCTG
TCGTCGTCGTCGTGTCCCCTGGACACGCAAAATGCACCGCAGTCATTTTC
ACCTCATTTACGTCTCTTCCTCTACGTATTCTTCCCTTCATTAAACACAG
TCCCTTCACCTTCATCTTCTAAGCCATGCGAACCACCGCCTGCCTGCTCG
CCGGCCTCGGCCTCACCCAAGCCTTCCTGGCCCCTACCCTCCCCAGCGCC
CGCTCCTTCAGCCGCAAGTGAGTAGTTGTCTCATGTTGCCTGAAGTGTTC
AAGGAGGTCTTAGAGCTGCAGAGATCGCTCACGCGCACCTGCCGTCGCTC
TGCCATGGCTCTTGTCTCCTTTGTTCTCTCACCCCTCATCCATCCTATTC
AACCCTCACCACACAGCGCCGTGACCATGAAGTTGGGCTCTTCCGCAGAG
GGCCTCGTCGGCAGCGACATCGAGTTCCCCGAGTTTGACCCTCTGGTAAG
TTTCTTGTTTCCCTGCTGGTTGAGCCATTGGATTTCCCCTCCCTCCAATG
CCCGCTGTAGTCCGTACTCTGTCCATTCCCAAAATAGTCAAGAATACTGT
GTCTAATGTCTCGGCTTCTTATCTCATATTAATCACACAGGGCTTCACCA
ACAACCCCAAGCCCGAGACTCTTGACTGGTACCGTGCCGCTGAGCTCAAG
CACGGGCGCGTGGCCATGCTTGCCGCCCTCGGCCAGATCGTGCAACACTT
CTACACCCTGCCCGATGCCTCGGGCGTCTTCTCCGCCGGCGATCGACCCT
TTGAGGCCTTGAACAAGGTGGTGAATGAGCGCCCGTTGGCGGCGATCCAG
ATTGGCCTGGCGATTTTCGCGGTGGAGGCGCTGGGGCAATTTAACCAGGC
CAAGCCTGGGCAGGCCCCTGGGGACCTCGGCTGGGACCCCCTTAACTTGA
AGAGCGATGACCCCGAGATCTACGAGAAGGTGCAAAAGCGCGAGTTGAAG
AATGGACGCTTGGCCATGGTAGGTGGTGGATGGTGGTGATGGCTGGGTTA
GGTTGAAGGAGATGTTACGAGACCGTTCAAAAGGGAGCAATCGGAGTCTT
TTTGCGGTGATGTACACAACCCGGAGCGTTTTCTGATCTTCCGTTTTCCC
TCCTTACTTCTTCCTCTCTCCCCTTTCCCCCTTCCCCTCGTCTAGATTGC
GATTGCCGGCATGCTTGTGCAGGAGAACCTGACGGGCCTCGGGGTGATTG
AGCAATGGGGTACGTCATGCAGTCAATTGGGAGGGAACGAAGAAGAAAGA
GGCGAGAAGAAAGGATCGATGGACGAAGAGAAGATCCGAAAAGAGTCCCA
GAAATCGTGGATGAGAGGGCATGGCATGGCTCAAAACGATCACTTCTCGA
CCCTCCCTCCCGCCCTCCCTCTCCTTCCCACCTCACAGTCAAGGGCGACA
TCAACCCCTT back to topCoding sequence (CDS) from alignment at scaffold_14:359968..361877- >mRNA_6031 ID=mRNA_6031|Name=jgi.p|Nanoce1779_2|593535|organism=Nannochloropsis oceanica|type=CDS|length=618bp|location=Sequence derived from alignment at scaffold_14:359968..361877- (Nannochloropsis oceanica)
ATGGGCCAGGTTGCTTTTCCTTCTTTCTGTGGCCCGCGTGGACATATGCG
TGGAGGGAAGCAAGATGAAGAGGCGATCAAGCAAGGAGGGGTAGAGATCT
CCTTGACCTACTTTGTTTGCCTTTCCACCCCATCCCATCTGACACGTAAA
CACTCCATTTGTTGGATGAATTCCTTCACCTTTCACGTTGTTGCTGCACA
CATCTTTTCGTACGCCTTCAGCCTATCCTGTCGGCAGTCATCTCCCACAA
CTCTTTCCACCGAGCAGGAAGCAAGCAACCAAGAGGGAGCAGTTGGAAAC
GACTATGGATACCTCAGTCAAGGAAGCACTCGGGCCCGGACAAGAAGGCA
CGGCGTATGTGGGGATCTGAGTACAGCAATATCATGGAGAACGGTGCTTA
TGGTGCGGGGCGGGGCCTTGCGGTGGCCAACCCAAACATGGACGCAAGAA
ATGCGTAGTGGAATGCTTGCAAGAGGAAGGCCCTGCTTCGACCCTGTCGT
CGTCGTCGTGTCCCCTGGACACGCAAAATGCACCGCAGTCATTTTCACCT
CATTTACGTCTCTTCCTCTACGTATTCTTCCCTTCATTAAACACAGTCCC
TTCACCTTCATCTTCTAA back to top
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