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Properties
| Property Name | Value |
|---|
| TranscriptId | 99865 |
| Track | FilteredModels2 |
| ProteinId | 99779 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:78607..80338 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7023 ID=mRNA_7023|Name=jgi.p|Nanoce1779_2|99779|organism=Nannochloropsis oceanica|type=mRNA|length=1407bp
GGGGGGGGAGGGAGGGAGGGAGGGAGGTGGCTGGGAATATGGGCAATCGG
GAGCACTGTTGAAAGGGTGAGTATGTGGAGTGCAGGAATGATGTTAATAG
ATGTATACATGTAGTGTATACACATATAGTGTATCCATAGAAGTGTATAT
ATATGGTCAATTTCGCCCTTTTCTCTTGACAGGGCGTGGATGGTGGTGAC
ACATATATACATATCATTCATCGGTCTTGCCCTTTGCCTCCCTCCCTCCC
TACAGACCTACCTACCTACCTGTGTTCTCCTGCCCCCGCATCCGCCGTGT
CACGCCCTGCATGGTCAGATAGGTTTTTTTCAAGTCCTCGAAATGACGTC
GAAGCTCCTCTGTCTTACACTCTGCCGCCAGCTCCGGAGATGGATGGATC
ACGACCCCAGTCCTCGTGGCCCGTGCAGCTGCCGCTTCCTCCCTCCCTCT
CTCGTCCTCCGTGTCTTCTGCTTCGCTGCTGCTCGAGGAGGAGGGGGAGG
AAGAGGGGAGGAAAGAGGAGGAGGCTTGCGGGGAGGTAGACAGGGCCCAG
GGTCGCACACGCTTCTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTCCCTT
CTTCCCTCCCTTCTTCGTCTTTATTTTCGCCCGCTTCTGTTGCTTCTTCT
TCTTCCTCAACGTAGCAGATGCTGCTGTTATAGATGTTTGTCGCACCGCC
ACTGCTGCTGCTGCTACTGGTACCCCCTTCTGCTTGATAGCAGAAATGGT
GGTGGCAGAGGCCAGCTTTCCTCCCTCCTGCAGCTGCTGCTTTTGGACCC
GGTACTTCCCGTCTCCCCCCCTTTCCAAGACCACAATCATCTCCTCTTCT
TCTCTAGATACAGCCGCTGCTTTTGTTGCTGTTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCCTTCCCCCCCCCTCCGATTCTATTCAAAAGATAAGAAA
GCGGCATGTCCTCATCCTCCTCCCCTTCCACTTTCTCCTCCTCTTCCTCT
TCATCACTGCTGGCAAACAAAGCTGCTGCTACTACTGCTGCTCTTGCTTC
TCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTACCTCTTTCTCCTCCGCCGCCTCCTCCTCCTCCACCTCCATATTCCCA
TCTTCCATTTCTTCTTCTATCACAGCAGGTGGTGATGGTCCAGTTGCTGC
TGCTGGTGGTGGTGGTGGTGGTGATGATGATGCTGCTGCTGATGCTGCTG
CAGTCGCTCCCTCCTTCATTACTTGCTCTTCCTCCACCTCCTCCTTCTCC
TGCTGCTTCCTCACAGGTGGAGGGAATGATGATGACGAAGATGATGATGA
TGATGAAAGTGATGATAGTGCCGATGCTGCTTCCACCTTCCTTACCTCCA
CCTCCTC back to topprotein sequence of jgi.p|Nanoce1779_2|99779 >mRNA_7023-protein ID=mRNA_7023-protein|Name=jgi.p|Nanoce1779_2|99779|organism=Nannochloropsis oceanica|type=polypeptide|length=332bp
MVVTHIYISFIGLALCLPPSLQTYLPTCVLLPPHPPCHALHGQIGFFQVL
EMTSKLLCLTLCRQLRRWMDHDPSPRGPCSCRFLPPSLVLRVFCFAAARG
GGGGRGEERGGGLRGGRQGPGSHTLLPSLLPSLLPSLLPSLLRLYFRPLL
LLLLLPQRSRCCCYRCLSHRHCCCCYWYPLLLDSRNGGGRGQLSSLLQLL
LLDPVLPVSPPFQDHNHLLFFSRYSRCFCCCSSSSSSSSSSLPPPSDSIQ
KIRKRHVLILLPFHFLLLFLFITAGKQSCCYYCCSCFSCCCCCCCCCCCC
CCCCYLFLLRRLLLLHLHIPIFHFFFYHSRW* back to topmRNA from alignment at scaffold_16:78607..80338- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7023 ID=mRNA_7023|Name=jgi.p|Nanoce1779_2|99779|organism=Nannochloropsis oceanica|type=mRNA|length=1732bp|location=Sequence derived from alignment at scaffold_16:78607..80338- (Nannochloropsis oceanica)
GGGGGGGGAGGGAGGGAGGGAGGGAGGTGGCTGGGAATATGGGCAATCGG
GAGCACTGTTGAAAGGGTGAGTATGTGGAGTGCAGGAATGATGTTAATAG
ATGTATACATGTAGTGTATACACATATAGTGTATCCATAGAAGTGTATAT
ATATGGTCAATTTCGCCCTTTTCTCTTGACAGGGCGTGGATGGTGGTGAC
ACATATATACATATCATTCATCGGTCTTGCCCTTTGCCTCCCTCCCTCCC
TACAGACCTACCTACCTACCTGTGTTCTCCTGCCCCCGCATCCGCCGTGT
CACGCCCTGCATGGTCAGATAGGTTTTTTTCAAGTCCTCGAAATGACGTC
GAAGCTCCTCTGTCTTACACTCTGCCGCCAGCTCCGGAGATGGATGGATC
ACGACCCCAGTCCTCGTGGCCCGTGCAGCTGCCGCTTCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCTTCTCATCGGGCTCGCCGATCAGCGCGATGGGTT
TCTCTTCCATCTCCTCGTCCTCGTCCTCCTTCCCTCCTTCCCTCCCTTTC
TCGTCCTCCGTGTCTTCTGCTTCGCTGCTGCTCGAGGAGGAGGGGGAGGA
AGAGGGGAGGAAAGAGGAGGAGGCTTGCGGGGAGGTAGACAGGGCCCAGG
GTCGCACACGCTTCTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTCCCTTC
TTCCCTCCCTTCTTCGTCTTTATTTTCGCCCGCTTCTGTTGCTTCTTCTT
CTTCCTCAACGTAGCAGATGCTGCTGTTATAGATGTTTGTCGCACCGCCA
CTGCTGCTGCTGCTACTGGTACCCCCTTCTGCTTGATAGCAGAAATGGTG
GTGGCAGAGGCCAGCTTTCCTCCCTCCTGCAGCTGCTGCTTTTGGACCCG
GTACTTCCCGTCTCCCCCCCTTTCCAAGACCACAATCATGCCTCCTCCTC
CTCCTCCTCCTCCTCTTAGAGAGGCTGCAGGCACTATCGCCGTTGTTTGA
ATCTTTTTGATTGCAAGGGGAGCAGGCGTGAAGGAGGAGGAGGACGAGGA
CGAGGAGGACGAGGAAGGAAGGGAGGGGGGGGCGGAGGAGGACGCGACAG
GTCCCGTCAAAGGCCTGTGTACATTCGCTTCCCTCCCTTCCTCCATCCCT
AACTCTTCTTCTCTTCTCCTCTTCTTCTCTAGATACAGCCGCTGCTTTTG
TTGCTGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTTCCCCCCCCCT
CCGATTCTATTCAAAAGATAAGAAAGCGGCATGTCCTCATCCTCCTCCCC
TTCCACTTTCTCCTCCTCTTCCTCTTCATCACTGCTGGCAAACAAAGCTG
CTGCTACTACTGCTGCTCTTGCTTCTCTTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTACCTCTTTCTCCTCCGCCGCCTC
CTCCTCCTCCACCTCCATATTCCCATCTTCCATTTCTTCTTCTATCACAG
CAGGTGGTGATGGTCCAGTTGCTGCTGCTGGTGGTGGTGGTGGTGGTGAT
GATGATGCTGCTGCTGATGCTGCTGCAGTCGCTCCCTCCTTCATTACTTG
CTCTTCCTCCACCTCCTCCTTCTCCTGCTGCTTCCTCACAGGTGGAGGGA
ATGATGATGACGAAGATGATGATGATGATGAAAGTGATGATAGTGCCGAT
GCTGCTTCCACCTTCCTTACCTCCACCTCCTC back to topCoding sequence (CDS) from alignment at scaffold_16:78607..80338- >mRNA_7023 ID=mRNA_7023|Name=jgi.p|Nanoce1779_2|99779|organism=Nannochloropsis oceanica|type=CDS|length=2988bp|location=Sequence derived from alignment at scaffold_16:78607..80338- (Nannochloropsis oceanica)
CTCCTCTTCTTCTCTAGATACAGCCGCTGCTTTTGTTGCTGTTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCCTTCCCCCCCCCTCCGATTCTATTCAAA
AGATAAGAAAGCGGCATGTCCTCATCCTCCTCCCCTTCCACTTTCTCCTC
CTCTTCCTCTTCATCACTGCTGGCAAACAAAGCTGCTGCTACTACTGCTG
CTCTTGCTTCTCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTACCTCTTTCTCCTCCGCCGCCTCCTCCTCCTCCACCTC
CATATTCCCATCTTCCATTTCTTCTTCTATCACAGCAGGTGGTGATCTCG
TCCTCCGTGTCTTCTGCTTCGCTGCTGCTCGAGGAGGAGGGGGAGGAAGA
GGGGAGGAAAGAGGAGGAGGCTTGCGGGGAGGTAGACAGGGCCCAGGGTC
GCACACGCTTCTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTCCCTTCTTC
CCTCCCTTCTTCGTCTTTATTTTCGCCCGCTTCTGTTGCTTCTTCTTCTT
CCTCAACGTAGCAGATGCTGCTGTTATAGATGTTTGTCGCACCGCCACTG
CTGCTGCTGCTACTGGTACCCCCTTCTGCTTGATAGCAGAAATGGTGGTG
GCAGAGGCCAGCTTTCCTCCCTCCTGCAGCTGCTGCTTTTGGACCCGGTA
CTTCCCGTCTCCCCCCCTTTCCAAGACCACAATCATATGGTGGTGACACA
TATATACATATCATTCATCGGTCTTGCCCTTTGCCTCCCTCCCTCCCTAC
AGACCTACCTACCTACCTGTGTTCTCCTGCCCCCGCATCCGCCGTGTCAC
GCCCTGCATGGTCAGATAGGTTTTTTTCAAGTCCTCGAAATGACGTCGAA
GCTCCTCTGTCTTACACTCTGCCGCCAGCTCCGGAGATGGATGGATCACG
ACCCCAGTCCTCGTGGCCCGTGCAGCTGCCGCTTCCTCCCTCCCTCCTCC
TCTTCTTCTCTAGATACAGCCGCTGCTTTTGTTGCTGTTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCCTTCCCCCCCCCTCCGATTCTATTCAAAAGAT
AAGAAAGCGGCATGTCCTCATCCTCCTCCCCTTCCACTTTCTCCTCCTCT
TCCTCTTCATCACTGCTGGCAAACAAAGCTGCTGCTACTACTGCTGCTCT
TGCTTCTCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTACCTCTTTCTCCTCCGCCGCCTCCTCCTCCTCCACCTCCATA
TTCCCATCTTCCATTTCTTCTTCTATCACAGCAGGTGGTGATCTCGTCCT
CCGTGTCTTCTGCTTCGCTGCTGCTCGAGGAGGAGGGGGAGGAAGAGGGG
AGGAAAGAGGAGGAGGCTTGCGGGGAGGTAGACAGGGCCCAGGGTCGCAC
ACGCTTCTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTC
CCTTCTTCGTCTTTATTTTCGCCCGCTTCTGTTGCTTCTTCTTCTTCCTC
AACGTAGCAGATGCTGCTGTTATAGATGTTTGTCGCACCGCCACTGCTGC
TGCTGCTACTGGTACCCCCTTCTGCTTGATAGCAGAAATGGTGGTGGCAG
AGGCCAGCTTTCCTCCCTCCTGCAGCTGCTGCTTTTGGACCCGGTACTTC
CCGTCTCCCCCCCTTTCCAAGACCACAATCATATGGTGGTGACACATATA
TACATATCATTCATCGGTCTTGCCCTTTGCCTCCCTCCCTCCCTACAGAC
CTACCTACCTACCTGTGTTCTCCTGCCCCCGCATCCGCCGTGTCACGCCC
TGCATGGTCAGATAGGTTTTTTTCAAGTCCTCGAAATGACGTCGAAGCTC
CTCTGTCTTACACTCTGCCGCCAGCTCCGGAGATGGATGGATCACGACCC
CAGTCCTCGTGGCCCGTGCAGCTGCCGCTTCCTCCCTCCCTCCTCCTCTT
CTTCTCTAGATACAGCCGCTGCTTTTGTTGCTGTTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCCTTCCCCCCCCCTCCGATTCTATTCAAAAGATAAGA
AAGCGGCATGTCCTCATCCTCCTCCCCTTCCACTTTCTCCTCCTCTTCCT
CTTCATCACTGCTGGCAAACAAAGCTGCTGCTACTACTGCTGCTCTTGCT
TCTCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTACCTCTTTCTCCTCCGCCGCCTCCTCCTCCTCCACCTCCATATTCC
CATCTTCCATTTCTTCTTCTATCACAGCAGGTGGTGATCTCGTCCTCCGT
GTCTTCTGCTTCGCTGCTGCTCGAGGAGGAGGGGGAGGAAGAGGGGAGGA
AAGAGGAGGAGGCTTGCGGGGAGGTAGACAGGGCCCAGGGTCGCACACGC
TTCTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTCCCTT
CTTCGTCTTTATTTTCGCCCGCTTCTGTTGCTTCTTCTTCTTCCTCAACG
TAGCAGATGCTGCTGTTATAGATGTTTGTCGCACCGCCACTGCTGCTGCT
GCTACTGGTACCCCCTTCTGCTTGATAGCAGAAATGGTGGTGGCAGAGGC
CAGCTTTCCTCCCTCCTGCAGCTGCTGCTTTTGGACCCGGTACTTCCCGT
CTCCCCCCCTTTCCAAGACCACAATCATATGGTGGTGACACATATATACA
TATCATTCATCGGTCTTGCCCTTTGCCTCCCTCCCTCCCTACAGACCTAC
CTACCTACCTGTGTTCTCCTGCCCCCGCATCCGCCGTGTCACGCCCTGCA
TGGTCAGATAGGTTTTTTTCAAGTCCTCGAAATGACGTCGAAGCTCCTCT
GTCTTACACTCTGCCGCCAGCTCCGGAGATGGATGGATCACGACCCCAGT
CCTCGTGGCCCGTGCAGCTGCCGCTTCCTCCCTCCCTC back to top
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