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Properties
| Property Name | Value |
|---|
| TranscriptId | 632573 |
| Track | FilteredModels2 |
| ProteinId | 632487 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:264920..268792 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7763 ID=mRNA_7763|Name=jgi.p|Nanoce1779_2|632487|organism=Nannochloropsis oceanica|type=mRNA|length=2493bp
GATAGTGTGTGAGGTGAGACATGATTTAGCCTAGCTGATGGATAGACTGA
TAGTGAGATCGATTTTCACCCCTAAATGAGCCTCTTAATACATCGAAGTA
TGTGATGGGTCGTTTGTATCCATCGATATGTCCGATGGCAAAGACTCGGA
TGATTGGGGAGGGAAGGGACTCCCCGGAGTGTGCCAGCAGATTATTTAAA
TCGACTTCCTACCTGAATCTACTTCCCTCATGGCACACATGAAAGCTTCA
TTCTGCCAATGCCCTTCGTACAGTCCCTCCACTAGTTCTTCAAGACACCC
ATCCCCACCACGGTCTTCGCCGCGTGCACCTGTGCGAGACGCAATGAAGA
TCATCAGCTGGAATGTGGCGTCCCTCCCGGCCTTGAAGGGCTTCATTGAG
CATGAAAAAGGCAGTATGAGACAGTTTTTGGATGACCTGAATGTGGACAT
TATGTGCTTTCAAGAAACTAAGCTTACCCTCGCGCAAGTGACTAAAAAAC
AAGCCTCTTTCCTGGTGCCAGATGGAGGGTGGTTCACCTACTGGTCTATT
GGACAAATTCCGGGCTATTGTGGCATTGCCACTTTTTGTAAAGCTGAGCC
AGCGGCAGTTTACACCGACGTGGAACTCTTAGAGGAGGAGAATGAGGAAG
GTTTCGAAATCTCGAAGGAGGGCAGGGTGTTACTTACTGATCACGGTGAC
TTTGTTTTGTTTAATGTATATTGTCCCAATGCCGGGGGGGAGGGAAGGCC
GAGATTAGAGTTTAAGAGGCGTTTTTTGGAGGCCCTATGGAAGAAGATGG
AGGAGTGGAGAGTACAAAGGAGGAGAAGGGTAGTACTGGTGGGCGATTTG
AATTTGGTGGCAGATATGAAAGAAGATATGCATATGGAATTTTGGAAAGA
GGAAGGTTTGGACGAACGGACGAGGCATTGGTTTCCGCGGGTGCTGGAGG
GGGGGAGATATGTAGATACATTTAGGGTGTTGCATCCTAGGGAGACGGAC
ACCTATTCGTTTTTTGATAACTACATTACGACCAGAAGAGGCGCGAATGA
AGGGTATAGGATTGACTATATTTTGCTGTCAAGCACGCCAGAGGAGACGA
TGCCCAAAATAACAAAGGCGGAGGTTCTGGGCAGTGGAGTTTTGAGGAGC
AATAAGGCGTCCGATCACATGCCGACATTTTGACTTTCGGCGTTCTGGCT
GACTATGCCACTTGACTTGTATGTGTGTAACATGCATATATGTGTAAGTA
TGTGTTTGTGAAGTGTGTGGGACTACCGACCTACCTACAGGCTTACATTA
TTTGATTAGATATGAGCTTATGGGGGCATTGTAGTACTTCTGATTTTTAT
CTCTCTCTTGTGTTCCGTTGGATGTGGGAAGTACTTGCCTTTTATGTGAT
ACTCCATTTATTAATTAAATAAACACGTACACACACTGTTGTTTGTTAGA
GACATATGTCCTCTTCATACATATGCGAACCACCATACCGTCACCCGGCT
TCCCTCTCGCCCTCCCTCGCACTCTCTATCCTTTACCTACACTCCATATG
CTTTCCGCGCGCTCTCCCTCTCTTTTTCACCTGTACTATAGTAAGATACA
CACTAACTAAAAGTCATTCTTCTCGTCTGCCAGTCTTTCTCCCTCTCTGA
TGAATTTTCTTTTTTCTCACTCTTTCCCCTCCTTCACCAATAGTCCAACA
AGAGGTCCGTAAACAAATCTTCATTCAACTCAGTCACCACATGGCTCAAC
ACCCGCTCCCGCCTTTCCGCGTAGCCCATAGTCAACGCACTACTATGGCC
ACTCTTACCGCGCCTGCTACTCATAGTGCTGCCACGACGATCAATCTTCG
CCCTTTTTACATATCCTCGCTTGTGGTGGTGGTTGTGGTGGTGCACGTTG
AGCTCCGGCGCACCCTGCTCTCGACGTGCTGTCAGCAGGGGGCAACCTAC
GCCACGAGAAGGAGCTTCGGGGCTGTATGCCGTGATTAAATGAAGCTTGC
GGCGGTAGTAAGTCATCCGAAGAGCGGCAGGATCTTGTACGTTGATGAAG
GAGAGGAGCGTAGGTAGGTCTCTGGCATTGGCTGCTTCGCGTGCTCGGAT
CTGACGGGGTGTGGCAGGGACGGGCTCTTTGCCCCCCCGGAGAGGGACGA
GCACACCGCCACCAGCAACACCAGCAGCAGGATCAATCGCAGCACCAACA
CCAGCGAGGAGTGGGTGCGACAGGGGAGGAGGGGGCAGAAGAGGGGGAGG
AGGGGGAGGAGCGAGGGTACCGCCAGTGATGGGCTTGACGTGAGTAGATA
TATCAGCAATTTCCCTCCCATCGATCTCCACCCAGCGAGACAAGCTAGGG
CGACCATCCACACTTAAGAGGATTCTGCGCCGTCGTCGATCAATATCTAG
AGCCGTGGCATCCCACCACTTCCTTTCCATCTCCTCCCACCGGACATGGG
GCGGAGAGGACAGCAACCCTCCTCCCCCTCCCCCCTCCCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|632487 >mRNA_7763-protein ID=mRNA_7763-protein|Name=jgi.p|Nanoce1779_2|632487|organism=Nannochloropsis oceanica|type=polypeptide|length=318bp
MAHMKASFCQCPSYSPSTSSSRHPSPPRSSPRAPVRDAMKIISWNVASLP
ALKGFIEHEKGSMRQFLDDLNVDIMCFQETKLTLAQVTKKQASFLVPDGG
WFTYWSIGQIPGYCGIATFCKAEPAAVYTDVELLEEENEEGFEISKEGRV
LLTDHGDFVLFNVYCPNAGGEGRPRLEFKRRFLEALWKKMEEWRVQRRRR
VVLVGDLNLVADMKEDMHMEFWKEEGLDERTRHWFPRVLEGGRYVDTFRV
LHPRETDTYSFFDNYITTRRGANEGYRIDYILLSSTPEETMPKITKAEVL
GSGVLRSNKASDHMPTF* back to topmRNA from alignment at scaffold_21:264920..268792+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7763 ID=mRNA_7763|Name=jgi.p|Nanoce1779_2|632487|organism=Nannochloropsis oceanica|type=mRNA|length=3873bp|location=Sequence derived from alignment at scaffold_21:264920..268792+ (Nannochloropsis oceanica)
GATAGTGTGTGAGGTGAGACATGATTTAGCCTAGCTGATGGATAGACTGA
TAGTGAGATCGATTTTCACCCCTAAATGAGCCTCTTAATACATCGAAGTA
TGTGATGGGTCGTTTGTATCCATCGATATGTCCGATGGCAAAGACTCGGA
TGATTGGGGAGGGAAGGGACTCCCCGGAGTGTGCCAGCAGATTATTTAAA
TCGACTTCCTACCTGAATCTACTTCCCTCATGGCACACATGAAAGCTTCA
TTCTGCCAATGCCCTTCGTACAGTCCCTCCACTAGTTCTTCAAGACACCC
ATCCCCACCACGGTCTTCGCCGCGTGCACCTGTGCGAGACGCAATGAAGA
TCATCAGCTGGAATGTGGCGTCCCTCCCGGCCTTGAAGGGCTTCATTGAG
CATGAAAAAGGCAGTATGAGACAGTTTTTGGATGACCTGAATGTGGACAT
TATGTGCTTTCAAGGTAGGATTAGATGGATAGAGACAGTTTTTGGATGAC
CTGAATGTGGACATTATGTGCTTTTAAGGTAGGATTAGTTGGATAGGAAG
GAAAAGTTACACTAAAAATGGAGTGTAGAGGGAGGGGAGACACAGGAAGA
GAAAGAGGGTATGCACGGATATGCGTGACATGTGCCATTTTCATTTCTTA
GCATGTCCCACTCTCCGACATTACGCCACATATACATGGTTCCTCTATTT
CTACCTCTACATCACAGAAACTAAGCTTACCCTCGCGCAAGTGACTAAAA
AACAAGCCTCTTTCCTGGTGCCAGATGGAGGGTGGTTCACCTACTGGTCT
ATTGGACAAATTCCGGGCTATTGTGGCATTGCCACTTTTTGTAAAGCTGA
GCCAGCGGCAGTTTACACCGACGTGGAACTCTTAGAGGAGGAGAATGAGG
AAGGTTTCGAAATCTCGAAGGAGGGCAGGGTGTTACTTACTGATCACGGT
GACTTTGTTTTGTTTAATGTATATTGTCCCAATGCCGGGGGGGAGGGAAG
GCCGAGATTAGAGTTTAAGAGGCGTTTTTTGGAGGCCCTATGGAAGAAGA
TGGAGGAGTGGAGAGTACAAAGGAGGAGAAGGGTAGTACTGGTGGGCGAT
TTGAATTTGGTGGCAGATATGAAAGAAGATATGCATATGGAATTTTGGAA
AGAGGAAGGTTTGGACGAACGGACGAGGCATTGGTTTCCGCGGGTGCTGG
AGGGGGGGAGATATGTAGATACATTTAGGGTGTTGCATCCTAGGGAGACG
GACACCTATTCGTTTTTTGATAACTACATTACGACCAGAAGAGGCGCGAA
TGAAGGGTATAGGATTGACTATATTTTGCTGTCAAGCACGCCAGAGGAGA
CGATGCCCAAAATAACAAAGGCGGAGGTTCTGGGCAGTGGAGTTTTGAGG
AGCAATAAGGCGTCCGATCACATGCCGGTGATGGTGGAGCTGGAATTTGG
GAGCAAGGGAGGGAAGGAGGAAGGGATGGAGGGCGAGGAAGGAGGGGGAA
AGCCGCAGGAGCACGAGCAAGAGCACACACAGGAGCAGCAGCATCAGCAT
CAGCATCAGCTGCAGAAATGTGGGGAGGAGCAGCCGCGGGCATTCTCTTC
GGTACTGCCTGTGCAAGTGTCGCCGTTGCTCTGCGACGTCAAGGCCAAGG
TGGAAGGACGGGTGCTCTTCCGGAAGCTGCTGCCTGATCCGAACCAACAG
AGTATTAAGGGTTTTTTTGCTGCTAAGAAAACAACAGTGACGACGACTAC
GACTGAGAATGGTGTGAACATGGAGGCAACAGGAGCAGGAGCAGGAGGAC
GAGGAGGACGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAT
GGATCAGCAGTACAACCACCACCAGGAACAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGGACGGAAAGGAGAAGCAGCAGGTGGTGTCGTGAAGAGAA
GGGCAGAAGTTAGGGTCGAAGCGGAGACGGGAAAGGATAGAAAAAAAGCG
CGAGAGGCCACGGCGACTGAGGGGAAGGGGCTGCGCAAGTTTTTGACGAG
TGCGTCCACAAGCAGTTGCAGCATCCGCACTAGCATCCACACTAGCAGCA
GCAGCAGTAGTAAAAATAAGGAAGTGTAAAAAAGACTGGATCAAGGGAGG
GGGATGATTCATATATGTTTTGATATTATAGCGATATAGAAGACGATTTA
TCGGAGAACCCGGGACAGGGAAAAAGCGAGGCTTGTACATAAAAAGTCAG
CAGCACTTTAAAAATCAATAGCGTCACATGAGATCGTTATCTATATCCCT
TTTCCTCCTTATTTCCCCCCTCTCTTTCACGTTTGTGTACTATGAACGAA
TCGTATATGTGCTTCAGAGGCATGGGTCTTATTGCGTTTATCATCACATC
TAGTCAGAAGGCAGAGCCGTCGTGATGGTGGTGACACGTTGCTTATTGAT
ATCTTCTGTCTTCTGTTATTTCTTGTCCCCCCCAATATTATTCCGTTTCA
CAAGTCAGTGACTCACTGGGCTGATGCATGGGCCGTACTTCTGGGTCCCT
TCAGACATTTTGACTTTCGGCGTTCTGGCTGACTATGCCACTTGACTTGT
ATGTGTGTAACATGCATATATGTGTAAGTATGTGTTTGTGAAGTGTGTGG
GACTACCGACCTACCTACAGGCTTACATTATTTGATTAGATATGAGCTTA
TGGGGGCATTGTAGTACTTCTGATTTTTATCTCTCTCTTGTGTTCCGTTG
GATGTGGGAAGTACTTGCCTTTTATGTGATACTCCATTTATTAATTAAAT
AAACACGTACACACACTGTTGTTTGTTAGAGACATATGTCCTCTTCATAC
ATATGCGAACCACCATACCGTCACCCGGCTTCCCTCTCGCCCTCCCTCGC
ACTCTCTATCCTTTACCTACACTCCATATGCTTTCCGCGCGCTCTCCCTC
TCTTTTTCACCTGTACTATAGTAAGATACACACTAACTAAAAGTCATTCT
TCTCGTCTGCCAGTCTTTCTCCCTCTCTGATGAATTTTCTTTTTTCTCAC
TCTTTCCCCTCCTTCACCAATAGTCCAACAAGAGGTCCGTAAACAAATCT
TCATTCAACTCAGTCACCACATGGCTCAACACCCGCTCCCGCCTTTCCGC
GTAGCCCATAGTCAACGCACTACTATGGCCACTCTTACCGCGCCTGCTAC
TCATAGTGCTGCCACGACGATCAATCTTCGCCCTTTTTACATATCCTCGC
TTGTGGTGGTGGTTGTGGTGGTGCACGTTGAGCTCCGGCGCACCCTGCTC
TCGACGTGCTGTCAGCAGGGGGCAACCTACGCCACGAGAAGGAGCTTCGG
GGCTGTATGCCGTGATTAAATGAAGCTTGCGGCGGTAGTAAGTCATCCGA
AGAGCGGCAGGATCTTGTACGTTGATGAAGGAGAGGAGCGTAGGTAGGTC
TCTGGCATTGGCTGCTTCGCGTGCTCGGATCTGACGGGGTGTGGCAGGGA
CGGGCTCTTTGCCCCCCCGGAGAGGGACGAGCACACCGCCACCAGCAACA
CCAGCAGCAGGATCAATCGCAGCACCAACACCAGCGAGGAGTGGGTGCGA
CAGGGGAGGAGGGGGCAGAAGAGGGGGAGGAGGGGGAGGAGCGAGGGTAC
CGCCAGTGATGGGCTTGACGTGAGTAGATATATCAGCAATTTCCCTCCCA
TCGATCTCCACCCAGCGAGACAAGCTAGGGCGACCATCCACACTTAAGAG
GATTCTGCGCCGTCGTCGATCAATATCTAGAGCCGTGGCATCCCACCACT
TCCTTTCCATCTCCTCCCACCGGACATGGGGCGGAGAGGACAGCAACCCT
CCTCCCCCTCCCCCCTCCCCCCC back to topCoding sequence (CDS) from alignment at scaffold_21:264920..268792+ >mRNA_7763 ID=mRNA_7763|Name=jgi.p|Nanoce1779_2|632487|organism=Nannochloropsis oceanica|type=CDS|length=2862bp|location=Sequence derived from alignment at scaffold_21:264920..268792+ (Nannochloropsis oceanica)
ATGGCACACATGAAAGCTTCATTCTGCCAATGCCCTTCGTACAGTCCCTC
CACTAGTTCTTCAAGACACCCATCCCCACCACGGTCTTCGCCGCGTGCAC
CTGTGCGAGACGCAATGAAGATCATCAGCTGGAATGTGGCGTCCCTCCCG
GCCTTGAAGGGCTTCATTGAGCATGAAAAAGGCAGTATGAGACAGTTTTT
GGATGACCTGAATGTGGACATTATGTGCTTTCAAGAAACTAAGCTTACCC
TCGCGCAAGTGACTAAAAAACAAGCCTCTTTCCTGGTGCCAGATGGAGGG
TGGTTCACCTACTGGTCTATTGGACAAATTCCGGGCTATTGTGGCATTGC
CACTTTTTGTAAAGCTGAGCCAGCGGCAGTTTACACCGACGTGGAACTCT
TAGAGGAGGAGAATGAGGAAGGTTTCGAAATCTCGAAGGAGGGCAGGGTG
TTACTTACTGATCACGGTGACTTTGTTTTGTTTAATGTATATTGTCCCAA
TGCCGGGGGGGAGGGAAGGCCGAGATTAGAGTTTAAGAGGCGTTTTTTGG
AGGCCCTATGGAAGAAGATGGAGGAGTGGAGAGTACAAAGGAGGAGAAGG
GTAGTACTGGTGGGCGATTTGAATTTGGTGGCAGATATGAAAGAAGATAT
GCATATGGAATTTTGGAAAGAGGAAGGTTTGGACGAACGGACGAGGCATT
GGTTTCCGCGGGTGCTGGAGGGGGGGAGATATGTAGATACATTTAGGGTG
TTGCATCCTAGGGAGACGGACACCTATTCGTTTTTTGATAACTACATTAC
GACCAGAAGAGGCGCGAATGAAGGGTATAGGATTGACTATATTTTGCTGT
CAAGCACGCCAGAGGAGACGATGCCCAAAATAACAAAGGCGGAGGTTCTG
GGCAGTGGAGTTTTGAGGAGCAATAAGGCGTCCGATCACATGCCGACATT
TTGAATGGCACACATGAAAGCTTCATTCTGCCAATGCCCTTCGTACAGTC
CCTCCACTAGTTCTTCAAGACACCCATCCCCACCACGGTCTTCGCCGCGT
GCACCTGTGCGAGACGCAATGAAGATCATCAGCTGGAATGTGGCGTCCCT
CCCGGCCTTGAAGGGCTTCATTGAGCATGAAAAAGGCAGTATGAGACAGT
TTTTGGATGACCTGAATGTGGACATTATGTGCTTTCAAGAAACTAAGCTT
ACCCTCGCGCAAGTGACTAAAAAACAAGCCTCTTTCCTGGTGCCAGATGG
AGGGTGGTTCACCTACTGGTCTATTGGACAAATTCCGGGCTATTGTGGCA
TTGCCACTTTTTGTAAAGCTGAGCCAGCGGCAGTTTACACCGACGTGGAA
CTCTTAGAGGAGGAGAATGAGGAAGGTTTCGAAATCTCGAAGGAGGGCAG
GGTGTTACTTACTGATCACGGTGACTTTGTTTTGTTTAATGTATATTGTC
CCAATGCCGGGGGGGAGGGAAGGCCGAGATTAGAGTTTAAGAGGCGTTTT
TTGGAGGCCCTATGGAAGAAGATGGAGGAGTGGAGAGTACAAAGGAGGAG
AAGGGTAGTACTGGTGGGCGATTTGAATTTGGTGGCAGATATGAAAGAAG
ATATGCATATGGAATTTTGGAAAGAGGAAGGTTTGGACGAACGGACGAGG
CATTGGTTTCCGCGGGTGCTGGAGGGGGGGAGATATGTAGATACATTTAG
GGTGTTGCATCCTAGGGAGACGGACACCTATTCGTTTTTTGATAACTACA
TTACGACCAGAAGAGGCGCGAATGAAGGGTATAGGATTGACTATATTTTG
CTGTCAAGCACGCCAGAGGAGACGATGCCCAAAATAACAAAGGCGGAGGT
TCTGGGCAGTGGAGTTTTGAGGAGCAATAAGGCGTCCGATCACATGCCGA
CATTTTGAATGGCACACATGAAAGCTTCATTCTGCCAATGCCCTTCGTAC
AGTCCCTCCACTAGTTCTTCAAGACACCCATCCCCACCACGGTCTTCGCC
GCGTGCACCTGTGCGAGACGCAATGAAGATCATCAGCTGGAATGTGGCGT
CCCTCCCGGCCTTGAAGGGCTTCATTGAGCATGAAAAAGGCAGTATGAGA
CAGTTTTTGGATGACCTGAATGTGGACATTATGTGCTTTCAAGAAACTAA
GCTTACCCTCGCGCAAGTGACTAAAAAACAAGCCTCTTTCCTGGTGCCAG
ATGGAGGGTGGTTCACCTACTGGTCTATTGGACAAATTCCGGGCTATTGT
GGCATTGCCACTTTTTGTAAAGCTGAGCCAGCGGCAGTTTACACCGACGT
GGAACTCTTAGAGGAGGAGAATGAGGAAGGTTTCGAAATCTCGAAGGAGG
GCAGGGTGTTACTTACTGATCACGGTGACTTTGTTTTGTTTAATGTATAT
TGTCCCAATGCCGGGGGGGAGGGAAGGCCGAGATTAGAGTTTAAGAGGCG
TTTTTTGGAGGCCCTATGGAAGAAGATGGAGGAGTGGAGAGTACAAAGGA
GGAGAAGGGTAGTACTGGTGGGCGATTTGAATTTGGTGGCAGATATGAAA
GAAGATATGCATATGGAATTTTGGAAAGAGGAAGGTTTGGACGAACGGAC
GAGGCATTGGTTTCCGCGGGTGCTGGAGGGGGGGAGATATGTAGATACAT
TTAGGGTGTTGCATCCTAGGGAGACGGACACCTATTCGTTTTTTGATAAC
TACATTACGACCAGAAGAGGCGCGAATGAAGGGTATAGGATTGACTATAT
TTTGCTGTCAAGCACGCCAGAGGAGACGATGCCCAAAATAACAAAGGCGG
AGGTTCTGGGCAGTGGAGTTTTGAGGAGCAATAAGGCGTCCGATCACATG
CCGACATTTTGA back to top
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