jgi.p|Nanoce1779_2|202300, gene_8119 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|202300
Unique Namegene_8119
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:207010..212452 -

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Properties
Property NameValue
TranscriptId202386
ProteinId202300
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:207010..212452 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0008270zinc ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|202300mRNA_8119-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|202300mRNA_8119Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|202300

>mRNA_8119-protein ID=mRNA_8119-protein|Name=jgi.p|Nanoce1779_2|202300|organism=Nannochloropsis oceanica|type=polypeptide|length=1467bp
MVTSTNTFTPALTPSSGPCARLHVTKRDGCVVVSNVLADGSVDPTYPNPA
DSVATLAESDDPSTCALLQECARQVFRSGPLEKLGEWCNHLLCAEVGPRE
GGGATTAGTKSAAVDMDRLKTLHLTNRRGVCGYTFKNGDLCWNCRSCQTD
STCVQCDTCFRGSNHAGHDVYFHHASPGGCCDCGDLEAWDRMGCCAQHSG
ADPGRDPIENLPASMRRPARVVIGEAVRLVTEACLHAVQGYNCSDRHGFL
VLADGAAAPTVAAGGAAADEGHCLVLLHNDDVHTYNQVTDALLGLRFNAS
AAQILTERVDSQGHAVIKRGTARELEPMLDFLAARGLLVSLVDEFQMDRG
ERAARLLVWLTRLSTQVDGLARIVAELLAEACPLELSQLSYKEGTRWGTP
WVRIYQPAPDDASLALSTEDASLNLSEGRSSSRLALLMMSDFFLIKNLRV
ELHALYLHLLVDAHFKPALAKALTWCYPALNSLYSRGVGTHEDNLFSFSV
QLYTTPSIVRWLVTSTEDEEELGSRGLLRVLVEAVRQAFKIAGWREGHPL
PETFWGHLVLQHRRYAHLLRDIDYALQTEGTAAAMLRQEYPGPGPDPLPL
WVSVLGALQHVDGTMRKTGAHMEFESIVWTQAFTLSFPLYSTSATLISYG
LRLPSLAQSTPSFSSFTYFSPSLAVEGDSGEEIERKARLKGYRALIKQGM
EGLMGWLKKEEDRARLGDHRNASILFDRVPLQVYREMGTGLVMRRTCVYF
KLHSGLVSFHLPLHRFLAAVVLEGSSQGLPFPSYLVEVKGGREELRESKA
EMRKAWDRLAVDLAASGNHGASVQGQKEEQIRDDDDLLVVGLADFPLRCL
ALNAQVSAGLWRRNGLAMQASGMHYSSPPFCRAFRDMDLAAVQLAVVLGG
NEVVLGLLLDRFCLSEWAGVPIGEEWKKVVPFEEKDMVVLAEEGFLLLIQ
LVTELPRPPGVGHREAVLRREMVHRLACRKGLTHSEVQQVNALMDRTGRE
GMEDEEEERGDESYNRGVAFDRILECVSTRKTGTDGAARFDLRPECAWEY
DPTFYHICRQEHEAALERIAGMRKQAAPAASSLTAVEGELRPCVGFLPVA
HPDFTCVRLLLFWPEVVGFQYTVLQAAARETVEPEGSRNNSTHIHLAAPR
TKRSPLLLVRCLHLLTLQLHVYEEALGWEEEQEKEHQEEKGMEKKKLRAY
RERKDRPVRGFWEALTRRRCKTNGLMLPWKEEGAGAAAVGAARRSSGVSN
GGFDDGVGADELPMEEKHSTVGASSSALDGEGMQMEDVGEKVVKDVENWQ
DGPSILELLVTLAQDSGSMNSINSGSGCCSKDNGLNIGPLYEEGLLWIFR
ELHDKHLGRFPADAKAEFEVLLRSLGKRSAPATAAMTTATAAVAAQGGVG
KGKRGESGSKGDNARRAQAKAMKFFQQQQIKFLEEQASGERGEEEEEEGE
GRDESGEGGSGVFVLS*
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Synonyms
Publications