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Properties
Property Name | Value |
TranscriptId | 604869 |
Track | FilteredModels2 |
ProteinId | 604783 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:103412..106042 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8987 ID=mRNA_8987|Name=jgi.p|Nanoce1779_2|604783|organism=Nannochloropsis oceanica|type=mRNA|length=2631bp ACAGGCTTACGGGATGTCTAAATTGTCGTCGGAAGAAGGCTCTAGTGCCT CGTCCACTACAAGGAATGCTGCCAGGAGCCTGCCAGTGGCTGCTCTGGAG GCAGATGCGGAGGAGCGGGCCAAGCGCGCCCAGATCTCAACCTGTACACC ACAGCCCAACGGGTGGAGTAGGAGATTTTTTTTGTGTGGCGCTCCCCCCT CCTGTTCAAGCCCTTCAATAACGATAAAGGGGTGGCTATTACTGTGTGGG CTGCAACGAGTGGAAGAGAGGAAACTCCTTGCAGGCGGACGACCACCTGA GGAATCGCTATCCAGACGAATGGACTCGCGTCAAACGCCTCTCTAACGCA GAGGCGAGTGATATCGTGTAGGCCTCGTCTTCTAGATCGAAGGTGCAGAC CAAACTTCACCACCATCAATACTGGTGGGGCCAGGCCCTCCAACACGTGC ACAATTACCTTAAAGGCAGACCAAAGGCATTCGAGCTCATTTCCTTGGTG CACGAGGTGATTTTACGGGAGCATAGCCACGAAAGATTTTGGAGGTATTC AAAGCACTTGAGAGACCTGGCCCGTTCAAGGAGACGGCCCCTAGTGCTCG ACATTTTGTTGGATGCCAGGTTTGCCCGCAGCCTCCGACCCTTTAACCTC GGCAACGACCAAGCGTTTGAGTATTTTGTGTCGACCATCGCCCCCCGAAA TAGGCTGCCGACAACCCAGACTGTACGCAAGCATGTGGGGGTAATGTTTG TCCAATGCAAGGTGCTCATCAAGGGCTATATCGCCCCGCGGGGCTCGGAT GAGGGGTTTGGTCCAGCATGTTGTCTGACCGCCTGCCTTCAAACCGCTTG GGCCGGACGCAACGACAGATCCTACAACGGCACACTTGCCAACATGCAGA ACGACGACTTCAGGCCCCGCCTCGTCTGCTTGGACATGGTGAAGTGCTTG ATAAAGCACCACACGGCTGCCATGATCACCGAGATGCTGGCCAAGACAAT TGAACACTTCAATATTCCTCATGCCGCTATCTTCGGCACGGTCCTAGACA CTCGGTCGAATGTAAAGGAAGGTGCATGAGCGCCATTTTTTTAAAATATT TTTTTTATTGCGATTTGATTTGATCTATTCATTCATTTACTTATCGATCG AAAGACACGTATACGTGTGTGTCTTTCCAAGATGTTTTGATTAAAGAAGG GCACTTCCCCATTGCTTCTGTCCTTGCATGATCATGCATGATTCCTGCTG AGCCAGTTGGATGGATCTCTTCGATATGCGTGACAAACATTATATTTAAC TTTGTTCCACATACATATTTTCCAGGCGTGCTAGACGTTGGTCTCAAGTC CTCCTCATGTTCTACAAATGCCTTACAGCGGACCGTCATCAACTCCCTGA ACGCTGCCTTTAACATTAAGATTATGCTGAGCAGGATGAAGTCAGCTGTG GCCATCATGCGCATGAGCCACTCCCAAACGGCTTACCTTAGGGAGGCACA GCGGGCAGCAGGCATGTTTGATCACCAGCTCATTCAGTCTATGCAACACG GTGGAGCTCAGTCGCTTTGCCATCGAGGGCCTGCTAGAGCAGCGGCTCAC AATCGATCCAGACGCCTTCAGTGCCCTGCGCAATCTACTCGCCATGCTCG ATCTCTCTCGATTCTAAAGGCGGAGTTTGGCACAGCCAGGAAGGTGGTGT CTGCCATCTTCAAGCTTAAAACACTCATGGCTGCTGAGAGGGTCGTTCTT GCCACCTGTGTCAGGGCCAGACCATCCTGGGTCCAGTGCCGAGGTTGTTG CTACGGACCTCTACAGCGGTGTCCAGAAAGTCCGCCAGCATATGTCAAAG ACTCGTTCCGGGTGTTTCTCATACCTCTGTGGATCAACGCTCTGTATAAA CTCCATTAGGCTTAGATTGAAGCCAATTTCACATGGCTTTAAATCGGTAA GCTTCTCTTCTCATAGGGATACCCTTTCTCCGTCAGAAGCCCTCTTAGAT CCCTAAACCAATAAAAAGCGCGAAGCGCGTATGAAAAACAAAAACACCAC AATAACATAAACCGGGTTAGGGTTAGGGTTAGTTTATGTCTTTTACCGTG GTTCGTTCTTCTACGGAAACAACTCAATCGCTTTTTACTCGTTTAATTAA CCCTAAACCTCGTAATCAAAGGGGGCTTGAGCAGACGGCGCGATGGAAGG AGCAAGGGAAGAAGTCAAAAATGAGAGCATGACGTCACAGATGGAGCAAA CATTTTTGGTGATCGTATGCCTCCCTATAACAGCCGCATGGTCAACGAGC GGCCCATATGGGCCGGGATGTACTAACCTACTATGCATGTTACAAGTGCG CACTGTGCATTGCGTACTTGTGACAGTGGAAGAAGTCTTTCGGAGTCCTC AACCCCCGAGATGGTTCAATCGCATAAAAACAGAGCAACTGTGCCCATGG GGGGGAGGGAGCCCTCCCCGAAGATACGCTCCACACGTCGGACAACTGCG ATGTTGTGATAACTAACCTGATCTTGTGCAGAACTTTCTGTTGTCGAACT TTCAGTTGTTGGGGAGCACGAAAATGCACGTTGTGTTTACTTTGAGTGGT GAGGAGGGAAGGGCGAGAAAGTGGAAGGAGT back to topprotein sequence of jgi.p|Nanoce1779_2|604783 >mRNA_8987-protein ID=mRNA_8987-protein|Name=jgi.p|Nanoce1779_2|604783|organism=Nannochloropsis oceanica|type=polypeptide|length=224bp MIPAEPVGWISSICVTNIIFNFVPHTYFPGVLDVGLKSSSCSTNALQRTV INSLNAAFNIKIMLSRMKSAVAIMRMSHSQTAYLREAQRAAGMFDHQLIQ SMQHGGAQSLCHRGPARAAAHNRSRRLQCPAQSTRHARSLSILKAEFGTA RKVVSAIFKLKTLMAAERVVLATCVRARPSWVQCRGCCYGPLQRCPESPP AYVKDSFRVFLIPLWINALYKLH* back to topmRNA from alignment at scaffold_30:103412..106042- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8987 ID=mRNA_8987|Name=jgi.p|Nanoce1779_2|604783|organism=Nannochloropsis oceanica|type=mRNA|length=2631bp|location=Sequence derived from alignment at scaffold_30:103412..106042- (Nannochloropsis oceanica) ACAGGCTTACGGGATGTCTAAATTGTCGTCGGAAGAAGGCTCTAGTGCCT
CGTCCACTACAAGGAATGCTGCCAGGAGCCTGCCAGTGGCTGCTCTGGAG
GCAGATGCGGAGGAGCGGGCCAAGCGCGCCCAGATCTCAACCTGTACACC
ACAGCCCAACGGGTGGAGTAGGAGATTTTTTTTGTGTGGCGCTCCCCCCT
CCTGTTCAAGCCCTTCAATAACGATAAAGGGGTGGCTATTACTGTGTGGG
CTGCAACGAGTGGAAGAGAGGAAACTCCTTGCAGGCGGACGACCACCTGA
GGAATCGCTATCCAGACGAATGGACTCGCGTCAAACGCCTCTCTAACGCA
GAGGCGAGTGATATCGTGTAGGCCTCGTCTTCTAGATCGAAGGTGCAGAC
CAAACTTCACCACCATCAATACTGGTGGGGCCAGGCCCTCCAACACGTGC
ACAATTACCTTAAAGGCAGACCAAAGGCATTCGAGCTCATTTCCTTGGTG
CACGAGGTGATTTTACGGGAGCATAGCCACGAAAGATTTTGGAGGTATTC
AAAGCACTTGAGAGACCTGGCCCGTTCAAGGAGACGGCCCCTAGTGCTCG
ACATTTTGTTGGATGCCAGGTTTGCCCGCAGCCTCCGACCCTTTAACCTC
GGCAACGACCAAGCGTTTGAGTATTTTGTGTCGACCATCGCCCCCCGAAA
TAGGCTGCCGACAACCCAGACTGTACGCAAGCATGTGGGGGTAATGTTTG
TCCAATGCAAGGTGCTCATCAAGGGCTATATCGCCCCGCGGGGCTCGGAT
GAGGGGTTTGGTCCAGCATGTTGTCTGACCGCCTGCCTTCAAACCGCTTG
GGCCGGACGCAACGACAGATCCTACAACGGCACACTTGCCAACATGCAGA
ACGACGACTTCAGGCCCCGCCTCGTCTGCTTGGACATGGTGAAGTGCTTG
ATAAAGCACCACACGGCTGCCATGATCACCGAGATGCTGGCCAAGACAAT
TGAACACTTCAATATTCCTCATGCCGCTATCTTCGGCACGGTCCTAGACA
CTCGGTCGAATGTAAAGGAAGGTGCATGAGCGCCATTTTTTTAAAATATT
TTTTTTATTGCGATTTGATTTGATCTATTCATTCATTTACTTATCGATCG
AAAGACACGTATACGTGTGTGTCTTTCCAAGATGTTTTGATTAAAGAAGG
GCACTTCCCCATTGCTTCTGTCCTTGCATGATCATGCATGATTCCTGCTG
AGCCAGTTGGATGGATCTCTTCGATATGCGTGACAAACATTATATTTAAC
TTTGTTCCACATACATATTTTCCAGGCGTGCTAGACGTTGGTCTCAAGTC
CTCCTCATGTTCTACAAATGCCTTACAGCGGACCGTCATCAACTCCCTGA
ACGCTGCCTTTAACATTAAGATTATGCTGAGCAGGATGAAGTCAGCTGTG
GCCATCATGCGCATGAGCCACTCCCAAACGGCTTACCTTAGGGAGGCACA
GCGGGCAGCAGGCATGTTTGATCACCAGCTCATTCAGTCTATGCAACACG
GTGGAGCTCAGTCGCTTTGCCATCGAGGGCCTGCTAGAGCAGCGGCTCAC
AATCGATCCAGACGCCTTCAGTGCCCTGCGCAATCTACTCGCCATGCTCG
ATCTCTCTCGATTCTAAAGGCGGAGTTTGGCACAGCCAGGAAGGTGGTGT
CTGCCATCTTCAAGCTTAAAACACTCATGGCTGCTGAGAGGGTCGTTCTT
GCCACCTGTGTCAGGGCCAGACCATCCTGGGTCCAGTGCCGAGGTTGTTG
CTACGGACCTCTACAGCGGTGTCCAGAAAGTCCGCCAGCATATGTCAAAG
ACTCGTTCCGGGTGTTTCTCATACCTCTGTGGATCAACGCTCTGTATAAA
CTCCATTAGGCTTAGATTGAAGCCAATTTCACATGGCTTTAAATCGGTAA
GCTTCTCTTCTCATAGGGATACCCTTTCTCCGTCAGAAGCCCTCTTAGAT
CCCTAAACCAATAAAAAGCGCGAAGCGCGTATGAAAAACAAAAACACCAC
AATAACATAAACCGGGTTAGGGTTAGGGTTAGTTTATGTCTTTTACCGTG
GTTCGTTCTTCTACGGAAACAACTCAATCGCTTTTTACTCGTTTAATTAA
CCCTAAACCTCGTAATCAAAGGGGGCTTGAGCAGACGGCGCGATGGAAGG
AGCAAGGGAAGAAGTCAAAAATGAGAGCATGACGTCACAGATGGAGCAAA
CATTTTTGGTGATCGTATGCCTCCCTATAACAGCCGCATGGTCAACGAGC
GGCCCATATGGGCCGGGATGTACTAACCTACTATGCATGTTACAAGTGCG
CACTGTGCATTGCGTACTTGTGACAGTGGAAGAAGTCTTTCGGAGTCCTC
AACCCCCGAGATGGTTCAATCGCATAAAAACAGAGCAACTGTGCCCATGG
GGGGGAGGGAGCCCTCCCCGAAGATACGCTCCACACGTCGGACAACTGCG
ATGTTGTGATAACTAACCTGATCTTGTGCAGAACTTTCTGTTGTCGAACT
TTCAGTTGTTGGGGAGCACGAAAATGCACGTTGTGTTTACTTTGAGTGGT
GAGGAGGGAAGGGCGAGAAAGTGGAAGGAGT back to topCoding sequence (CDS) from alignment at scaffold_30:103412..106042- >mRNA_8987 ID=mRNA_8987|Name=jgi.p|Nanoce1779_2|604783|organism=Nannochloropsis oceanica|type=CDS|length=672bp|location=Sequence derived from alignment at scaffold_30:103412..106042- (Nannochloropsis oceanica) ATGATTCCTGCTGAGCCAGTTGGATGGATCTCTTCGATATGCGTGACAAA CATTATATTTAACTTTGTTCCACATACATATTTTCCAGGCGTGCTAGACG TTGGTCTCAAGTCCTCCTCATGTTCTACAAATGCCTTACAGCGGACCGTC ATCAACTCCCTGAACGCTGCCTTTAACATTAAGATTATGCTGAGCAGGAT GAAGTCAGCTGTGGCCATCATGCGCATGAGCCACTCCCAAACGGCTTACC TTAGGGAGGCACAGCGGGCAGCAGGCATGTTTGATCACCAGCTCATTCAG TCTATGCAACACGGTGGAGCTCAGTCGCTTTGCCATCGAGGGCCTGCTAG AGCAGCGGCTCACAATCGATCCAGACGCCTTCAGTGCCCTGCGCAATCTA CTCGCCATGCTCGATCTCTCTCGATTCTAAAGGCGGAGTTTGGCACAGCC AGGAAGGTGGTGTCTGCCATCTTCAAGCTTAAAACACTCATGGCTGCTGA GAGGGTCGTTCTTGCCACCTGTGTCAGGGCCAGACCATCCTGGGTCCAGT GCCGAGGTTGTTGCTACGGACCTCTACAGCGGTGTCCAGAAAGTCCGCCA GCATATGTCAAAGACTCGTTCCGGGTGTTTCTCATACCTCTGTGGATCAA CGCTCTGTATAAACTCCATTAG back to top
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