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Properties
Property Name | Value |
TranscriptId | 673910 |
Track | FilteredModels2 |
ProteinId | 673824 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:233351..235293 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9026 ID=mRNA_9026|Name=jgi.p|Nanoce1779_2|673824|organism=Nannochloropsis oceanica|type=mRNA|length=1339bp ACAGAAGAAACCATACCCCAGTATCATGAGGACCATGGCACCCTGGCTCG TCCACCTGACTCTTGCCCTGGGGGCTGTGTTGATGTGCCTGCCCGGAGCT GCCGCACTCAAGGACACGATCAAGAACCGCATGAAGTTGGCGGACAAGTA CATGGACGAGAACCCCGTGGATGAGGGAATGGAAGCCATGGCCCGACAAC ACATGCTGAAGATGCCTGACCCAAAGGAGCGTGAGCAGCTCATGAAGAAC ATGCAACAAATGGACACAGGCAAGGTCCGCACTATTACCCGTCAGGCTAT GGTGAAGCACTTCACTGTCGATGAGCTCGAGTATCTCATCAATATGTATA GCACTCACACGGGTAAGACATTGATGAGCAAAATCGGCGCGTATTCGGCC GAGATTCAGCCTCAGATCGCCGACGTCATGAAGGATATCATGGAGAACAA CGTAGTGTTTTACCAGGAGCAGGAGAAGCGGGCGCGGGCCGGTGAGTTGG ACCATGTGACTACTGAATTCGACAAGGAGAAGAAGCCGGAGGCAATTCAG TTGCCGCCGATGAATCAGAAGATCAAGGATGGAGTTTACATGGGAAGCAG CATGAAGGATGCCCGGCCAGTGAAGGATGAGGTCTAAATGAATCAACAGA GAAGAGGGCAAGAGCATTTGTCTAATCATTGATGTGGGGTGAAGAGGAGT GAAGATTTTCCTCGTCCAATTTTAATGTTCAACTGCGCCCGAAGACGGGA GAAGGAAAAAATCCATTTTAAAACTCAACAAAAACAACAGAAACAAGAGG CCAATAAAGAAGAAGAAAAAGGAGGAGGAAGAGAGGAAGCCTATGGCATG GATGCACGCATAGAGAGGACAGTTGCTGTCGTTCGGTCCCTCTGCATCAG CGCCATGCGGCGCGGAGACAGTTTATGCGGGGCTGGCTGCAAATCCCCAT CGGTAGGAGGGGAAAAAAATAAAAAGGAAAACAAGCGAAGAAAAGGAAGA AAGAAGGCATCACTACCGTCATAAGTCAAAGTACAGAAGACACCTACTCA AACAGCATGATGACCCACAGGACGAGAGCAGCGATAGGGCGCATGGGAGT GGAAGCAGTAGCGGCAGCAGCAGCGGCGGCGGCCACCCGCCTCTTCTTGA AGAGAGAAAGAACCACGACTCAGACTAGCGGAGGGTATTAAAATCTGGCA ACATCCTTGCCTTCTCCTCTTTACGAGGTGGAGACAGGAACATGGGAGTG GTACCCGAGCAAGTCAACTGAAAACCATAGAAATTCACCCAAAGAGTACA TCAAAACAAATAAACCATAAAGCCAGTGGGATAAAAGGC back to topprotein sequence of jgi.p|Nanoce1779_2|673824 >mRNA_9026-protein ID=mRNA_9026-protein|Name=jgi.p|Nanoce1779_2|673824|organism=Nannochloropsis oceanica|type=polypeptide|length=204bp MRTMAPWLVHLTLALGAVLMCLPGAAALKDTIKNRMKLADKYMDENPVDE GMEAMARQHMLKMPDPKEREQLMKNMQQMDTGKVRTITRQAMVKHFTVDE LEYLINMYSTHTGKTLMSKIGAYSAEIQPQIADVMKDIMENNVVFYQEQE KRARAGELDHVTTEFDKEKKPEAIQLPPMNQKIKDGVYMGSSMKDARPVK DEV* back to topmRNA from alignment at scaffold_30:233351..235293- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9026 ID=mRNA_9026|Name=jgi.p|Nanoce1779_2|673824|organism=Nannochloropsis oceanica|type=mRNA|length=1943bp|location=Sequence derived from alignment at scaffold_30:233351..235293- (Nannochloropsis oceanica) ACAGAAGAAACCATACCCCAGTATCATGAGGACCATGGCACCCTGGCTCG
TCCACCTGACTCTTGCCCTGGGGGCTGTGTTGATGTGCCTGCCCGGAGCT
GCCGCACTCAAGGACACGATCAAGAACCGCATGAAGTTGGCGGACAAGTA
CATGGACGAGAACCCCGTGGATGAGGGAATGGAAGCCATGGCCCGGTACG
GAAGTGGGGTGGATGTGGGTGGGTGCTATGGGGCATCACGAATCAATTGA
GGGGGTGATGCGGATGGCTTGGTTCCTCGCGGACCTGGTCATCGAGGGAG
AAAGCGAATTGAATGACGAGGTATAGGACCAAAACTTCGACACACTCACG
TTACTATGTGCTGACAACTAAATGCTCGCGGTGAGGCGCGCCAAGCAGCA
GGTACTCACCCTCCTTCGCCCCCACTCCCTTCCTCCTCTAGACAACACAT
GCTGAAGATGCCTGACCCAAAGGAGCGTGAGCAGCTCATGAAGAACATGC
AACAAATGGACACAGGCAAGGTCCGCACTATTACCCGTCAGGCTATGGTG
AAGCACTTCACTGTCGATGAGCTCGAGTATCTCATCAATATGTATAGGTA
AGCCCCCTTCCCTTCTCTTTCTCTCCCCTCCCTTCAGTACCATGTTCGTC
GTCTTCAATGCCAAAGCACCAGAAGCTTCTTGAACCAAATGACCAACTGA
GGGTGTCACAAGTCAAGCCATAACGCGTTCCCCTCAATTTTTTAGTGGGG
GTTCTGCTCCCTCCCTTCCAAAATTGCGAGACGGCCAAGGTCTAATGCAG
TGCCTCCCCCGCATAGAGGGTTCGGTGTTTTTCCCTGTCGGAGGGCGCCC
GGTACAGCAACGTGGAGTCTAATAAGATGTAGGAGAATAAAGAGGAAATG
ATCTCATCCATTATACCCCCTCTTCCCCCGTCCCTCTCCTCCCTCCCACC
CGCAGCACTCACACGGGTAAGACATTGATGAGCAAAATCGGCGCGTATTC
GGCCGAGATTCAGCCTCAGATCGCCGACGTCATGAAGGATATCATGGAGA
ACAACGTAGTGTTTTACCAGGAGCAGGAGAAGCGGGCGCGGGCCGGTGAG
TTGGACCATGTGACTACTGAATTCGACAAGGAGAAGAAGCCGGAGGCAAT
TCAGTTGCCGCCGATGAATCAGAAGATCAAGGATGGAGTTTACATGGGAA
GCAGCATGAAGGATGCCCGGCCAGTGAAGGATGAGGTCTAAATGAATCAA
CAGAGAAGAGGGCAAGAGCATTTGTCTAATCATTGATGTGGGGTGAAGAG
GAGTGAAGATTTTCCTCGTCCAATTTTAATGTTCAACTGCGCCCGAAGAC
GGGAGAAGGAAAAAATCCATTTTAAAACTCAACAAAAACAACAGAAACAA
GAGGCCAATAAAGAAGAAGAAAAAGGAGGAGGAAGAGAGGAAGCCTATGG
CATGGATGCACGCATAGAGAGGACAGTTGCTGTCGTTCGGTCCCTCTGCA
TCAGCGCCATGCGGCGCGGAGACAGTTTATGCGGGGCTGGCTGCAAATCC
CCATCGGTAGGAGGGGAAAAAAATAAAAAGGAAAACAAGCGAAGAAAAGG
AAGAAAGAAGGCATCACTACCGTCATAAGTCAAAGTACAGAAGACACCTA
CTCAAACAGCATGATGACCCACAGGACGAGAGCAGCGATAGGGCGCATGG
GAGTGGAAGCAGTAGCGGCAGCAGCAGCGGCGGCGGCCACCCGCCTCTTC
TTGAAGAGAGAAAGAACCACGACTCAGACTAGCGGAGGGTATTAAAATCT
GGCAACATCCTTGCCTTCTCCTCTTTACGAGGTGGAGACAGGAACATGGG
AGTGGTACCCGAGCAAGTCAACTGAAAACCATAGAAATTCACCCAAAGAG
TACATCAAAACAAATAAACCATAAAGCCAGTGGGATAAAAGGC back to topCoding sequence (CDS) from alignment at scaffold_30:233351..235293- >mRNA_9026 ID=mRNA_9026|Name=jgi.p|Nanoce1779_2|673824|organism=Nannochloropsis oceanica|type=CDS|length=1836bp|location=Sequence derived from alignment at scaffold_30:233351..235293- (Nannochloropsis oceanica) CACTCACACGGGTAAGACATTGATGAGCAAAATCGGCGCGTATTCGGCCG AGATTCAGCCTCAGATCGCCGACGTCATGAAGGATATCATGGAGAACAAC GTAGTGTTTTACCAGGAGCAGGAGAAGCGGGCGCGGGCCGGTGAGTTGGA CCATGTGACTACTGAATTCGACAAGGAGAAGAAGCCGGAGGCAATTCAGT TGCCGCCGATGAATCAGAAGATCAAGGATGGAGTTTACATGGGAAGCAGC ATGAAGGATGCCCGGCCAGTGAAGGATGAGGTCTAAACAACACATGCTGA AGATGCCTGACCCAAAGGAGCGTGAGCAGCTCATGAAGAACATGCAACAA ATGGACACAGGCAAGGTCCGCACTATTACCCGTCAGGCTATGGTGAAGCA CTTCACTGTCGATGAGCTCGAGTATCTCATCAATATGTATAGATGAGGAC CATGGCACCCTGGCTCGTCCACCTGACTCTTGCCCTGGGGGCTGTGTTGA TGTGCCTGCCCGGAGCTGCCGCACTCAAGGACACGATCAAGAACCGCATG AAGTTGGCGGACAAGTACATGGACGAGAACCCCGTGGATGAGGGAATGGA AGCCATGGCCCGCACTCACACGGGTAAGACATTGATGAGCAAAATCGGCG CGTATTCGGCCGAGATTCAGCCTCAGATCGCCGACGTCATGAAGGATATC ATGGAGAACAACGTAGTGTTTTACCAGGAGCAGGAGAAGCGGGCGCGGGC CGGTGAGTTGGACCATGTGACTACTGAATTCGACAAGGAGAAGAAGCCGG AGGCAATTCAGTTGCCGCCGATGAATCAGAAGATCAAGGATGGAGTTTAC ATGGGAAGCAGCATGAAGGATGCCCGGCCAGTGAAGGATGAGGTCTAAAC AACACATGCTGAAGATGCCTGACCCAAAGGAGCGTGAGCAGCTCATGAAG AACATGCAACAAATGGACACAGGCAAGGTCCGCACTATTACCCGTCAGGC TATGGTGAAGCACTTCACTGTCGATGAGCTCGAGTATCTCATCAATATGT ATAGATGAGGACCATGGCACCCTGGCTCGTCCACCTGACTCTTGCCCTGG GGGCTGTGTTGATGTGCCTGCCCGGAGCTGCCGCACTCAAGGACACGATC AAGAACCGCATGAAGTTGGCGGACAAGTACATGGACGAGAACCCCGTGGA TGAGGGAATGGAAGCCATGGCCCGCACTCACACGGGTAAGACATTGATGA GCAAAATCGGCGCGTATTCGGCCGAGATTCAGCCTCAGATCGCCGACGTC ATGAAGGATATCATGGAGAACAACGTAGTGTTTTACCAGGAGCAGGAGAA GCGGGCGCGGGCCGGTGAGTTGGACCATGTGACTACTGAATTCGACAAGG AGAAGAAGCCGGAGGCAATTCAGTTGCCGCCGATGAATCAGAAGATCAAG GATGGAGTTTACATGGGAAGCAGCATGAAGGATGCCCGGCCAGTGAAGGA TGAGGTCTAAACAACACATGCTGAAGATGCCTGACCCAAAGGAGCGTGAG CAGCTCATGAAGAACATGCAACAAATGGACACAGGCAAGGTCCGCACTAT TACCCGTCAGGCTATGGTGAAGCACTTCACTGTCGATGAGCTCGAGTATC TCATCAATATGTATAGATGAGGACCATGGCACCCTGGCTCGTCCACCTGA CTCTTGCCCTGGGGGCTGTGTTGATGTGCCTGCCCGGAGCTGCCGCACTC AAGGACACGATCAAGAACCGCATGAAGTTGGCGGACAAGTACATGGACGA GAACCCCGTGGATGAGGGAATGGAAGCCATGGCCCG back to top
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