jgi.p|Nanoce1779_2|524309, gene_2016 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|524309
Unique Namegene_2016
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:570516..572357 +

Link to JBrowse

Properties
Property NameValue
TranscriptId524395
ProteinId524309
Product nameSulfotransferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:570516..572357 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050659N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0004597peptide-aspartate beta-dioxygenase activity
GO:0008146sulfotransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0018193peptidyl-amino acid modification
Vocabulary: Cellular Component
TermDefinition
GO:0030176integral component of endoplasmic reticulum membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02230NO04G02230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524309mRNA_2016-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524309mRNA_2016Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|524309

>mRNA_2016-protein ID=mRNA_2016-protein|Name=jgi.p|Nanoce1779_2|524309|organism=Nannochloropsis oceanica|type=polypeptide|length=614bp
MATRTASPSPAAAAAKAYTASRSNNTTAPPRAVLANPALLALPRHIPPAG
QVGLGHKGVPINQLPEEAWGHVPLCRTRGQVCVAGLKRKLAEGGPKLWQE
EEARKSNVGVIRPSHDAWGIGKIVFVYCDDFLRRCFEMPWMHDPEWRALL
LPIFDALGVPPHKIVRCLLASMPPGIAIPPHHDTGYWVHYTHRIHLPVIT
DPAHIAFRVGPSDAHLQRFDLAEGHLIELNNQAKHSVDNCWGQHRVHLIM
DYIEGNSVSIERTLLSPGTKINQTRRSIDLESERGIRPCPSYIIIGAQKC
GTTSLYEYLCQHPLVLRARRRETHYLDWRWRREEGLTWREHRDTYHKFFH
KAILDENPSCLTGESTPSYMLHSDVVVPRVRELAPEAKMLVMLRCPVARA
YSQYQMVIDPDGTPEQKKARGTLWKGKSFEEVVEKELEELEACGVTPDMT
YEEFKTRFLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFT
EEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKNTRQYEQLDEKMQARLA
AFYAPFNDKLFEMLARPRGMAGWAGMKEEGGVRNGQVLSVDEAKSEQLRT
NVRTEQNMRRKRE*
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Synonyms
Publications