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Properties
| Property Name | Value |
|---|
| TranscriptId | 637250 |
| Track | FilteredModels2 |
| ProteinId | 637164 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:917483..919087 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2153 ID=mRNA_2153|Name=jgi.p|Nanoce1779_2|637164|organism=Nannochloropsis oceanica|type=mRNA|length=891bp
ATGCCCTGGACATTATTTGTGTACACCCTAGCCATCTGGCTAGTAGGACT
GGGGGGAGTGCTTGCCCCCTTATGTATGGCCTCCTATAACAAAGTGGTCC
TCACACTTTGCAACAGCCTTGCGGCGGGTGTCATGCTCTCGGCCGGGTTC
GTTCATTTACTCCACGACGCCGTCTCCTCCCTCGCGGGCCTGCAAACGAA
AATGAACGGCTACCCCGTCAGTGAATTTGTCTGTGCCTTGTCGTTTATTT
GCGTTTTCTATATCGAGACGTTGGTTTCCCCGCCGGTCAAACCGGGGGAA
CACCATCATCTTGATCATATTCAGCAGGCCCCGCAACCAGACTGTTGGAA
GACACGGGCAATCAGGCGGGAGCCGGAGGAGGAGGAGCAGCAGTACAAGG
ACACACAGCGCAAATGCACTCTCAAACTCATTCTTACGGCCACGGCCACG
GGCACAGCCATGAGCAAGGACACAATCATAGTCATACCCACGGAGATGGG
ACTTGGGCTTGCCACGGCCACGACGCAAAATGATGCGACGCAAGTAGGGG
TCTTCATCGCGATTCTGGCGCACAAAGGATTAGCAGGCCTTACCCTCGGC
ACCACCATGCTCCTCGCCGAAGCGAGCCAGACGGAATTCCTGGGCACGGC
CCTGCTCTTCTCAGTAGCTACCCCTTTAGGGGTGGGTTTAGGAGCGTTGA
TTTCCTCCTACTGTAAGTCAGCAGAGGCTTTGGGTCTCATGGCTGCCATC
GCGGCAGGGACATTCATTCACGTGGCGGCGATTGAAATCATCCCGTCGGC
GTTCCGGGACACCAGCGCCACGCATCTTGCGAAATTGGCGTCCTTGACGG
TGGGTTTTTTGGCAATGTCGGCCTTGTTTCTGGTAGAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|637164 >mRNA_2153-protein ID=mRNA_2153-protein|Name=jgi.p|Nanoce1779_2|637164|organism=Nannochloropsis oceanica|type=polypeptide|length=297bp
MPWTLFVYTLAIWLVGLGGVLAPLCMASYNKVVLTLCNSLAAGVMLSAGF
VHLLHDAVSSLAGLQTKMNGYPVSEFVCALSFICVFYIETLVSPPVKPGE
HHHLDHIQQAPQPDCWKTRAIRREPEEEEQQYKDTQRKCTLKLILTATAT
GTAMSKDTIIVIPTEMGLGLATATTQNDATQVGVFIAILAHKGLAGLTLG
TTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEALGLMAAI
AAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSALFLVE* back to topmRNA from alignment at scaffold_4:917483..919087- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2153 ID=mRNA_2153|Name=jgi.p|Nanoce1779_2|637164|organism=Nannochloropsis oceanica|type=mRNA|length=1605bp|location=Sequence derived from alignment at scaffold_4:917483..919087- (Nannochloropsis oceanica)
ATGCCCTGGACATTATTTGTGTACACCCTAGCCATCTGGCTAGTAGGACT
GGGGGGAGTGCTTGCCCCCTTATGTATGGCCTCCTATAACAAAGTGGTCC
TCACACTTTGCAACAGCCTTGCGGCGGGTGTCATGCTCTCGGCCGGGTTC
GTTCATTTACTCCACGACGCCGTCTCCTCCCTCGCGGGCCTGCAAACGAA
AATGAACGGCTACCCCGTCAGTGAATTTGTCTGTGCCTTGTCGTTTATTT
GCGTTTTCTATATCGAGACGTTGGTTTCCCCGCCGGTCAAACCGGGGGAA
CACCATCATCTTGATCATATTCAGGTGGACAAGGGAACGGAGTGCTTCCC
TTCTCAATGGGAATGGCAGGCAGGCCAGTCACCCAATAGAACCACGTGGA
CTCGCCCCAAGCAGACAGAACAGCAGCAGCGGGAGAAGCAGCAGCAAGAC
TCATCACCATTATTACCACTATATGGTGCTGTGTTGCCGCCATCAACGGC
AACAGGGGGCTTGTCAGGACCTAACTGCTGCAGCCACAGTAGTAGTTGCA
GCAAACAAATGAAAGAGACAACATCTTCGCCACAAATGCGAGCAGGCCCC
GCAACCAGACTGTTGGAAGACACGGGCAATCAGGCGGGAGCCGGAGGAGG
AGGAGCAGCAGTACAAGGACACACAGGTCTGCTGGCACACATGCAGCTGA
CCCATTCCCATCAGGTTGACCTCGAAGGGTCTTTAACCGCGCGTGGCGAC
CATCAGGATCAGGAAGTGTGTACAAGAGCCGCAAGCAGTACCAAAGCGGG
CCATCCCTCGTCCTCCTCTGCAGCGCAAATGCACTCTCAAACTCATTCTT
ACGGCCACGGCCACGGGCACAGCCATGAGCAAGGACACAATCATAGTCAT
ACCCACGGAGATGGTGATATGCTTGGCCTTTCTCTACATGGGCACAAGGA
CCTGCACACTTTCGCAGGTGCCTTATGCCTGCTTGCTGCCTTGGGCTTTC
ATTCTGTCATCGAGGGACTTGGGCTTGCCACGGCCACGACGCAAAATGAT
GCGACGCAAGTAGGGGTCTTCATCGCGATTCTGGCGCACAAAGGATTAGC
AGGTGAGTGTGTAGAAAGGATTGTTCGCCACCCCCCACATATACCCCTCT
CTTTTTCTCCTCTTCTCTTCTCTCCTCTTCTCTTCTCTCCTCTTCTCTTT
CTCTCTTTGCTAAGCGGGCCTGACCCTCCCCGAAGACTCCTTCTCATCCT
TCCGCTCCCTTTCCCCTCTCTTGTTGCCGCCTACCCCCCTATCTCTCCAG
GCCTTACCCTCGGCACCACCATGCTCCTCGCCGAAGCGAGCCAGACGGAA
TTCCTGGGCACGGCCCTGCTCTTCTCAGTAGCTACCCCTTTAGGGGTGGG
TTTAGGAGCGTTGATTTCCTCCTACTGTAAGTCAGCAGAGGCTTTGGGTC
TCATGGCTGCCATCGCGGCAGGGACATTCATTCACGTGGCGGCGATTGAA
ATCATCCCGTCGGCGTTCCGGGACACCAGCGCCACGCATCTTGCGAAATT
GGCGTCCTTGACGGTGGGTTTTTTGGCAATGTCGGCCTTGTTTCTGGTAG
AGTAA back to topCoding sequence (CDS) from alignment at scaffold_4:917483..919087- >mRNA_2153 ID=mRNA_2153|Name=jgi.p|Nanoce1779_2|637164|organism=Nannochloropsis oceanica|type=CDS|length=4455bp|location=Sequence derived from alignment at scaffold_4:917483..919087- (Nannochloropsis oceanica)
GCCTTACCCTCGGCACCACCATGCTCCTCGCCGAAGCGAGCCAGACGGAA
TTCCTGGGCACGGCCCTGCTCTTCTCAGTAGCTACCCCTTTAGGGGTGGG
TTTAGGAGCGTTGATTTCCTCCTACTGTAAGTCAGCAGAGGCTTTGGGTC
TCATGGCTGCCATCGCGGCAGGGACATTCATTCACGTGGCGGCGATTGAA
ATCATCCCGTCGGCGTTCCGGGACACCAGCGCCACGCATCTTGCGAAATT
GGCGTCCTTGACGGTGGGTTTTTTGGCAATGTCGGCCTTGTTTCTGGTAG
AGTAAGGACTTGGGCTTGCCACGGCCACGACGCAAAATGATGCGACGCAA
GTAGGGGTCTTCATCGCGATTCTGGCGCACAAAGGATTAGCAGCGCAAAT
GCACTCTCAAACTCATTCTTACGGCCACGGCCACGGGCACAGCCATGAGC
AAGGACACAATCATAGTCATACCCACGGAGATGCAGGCCCCGCAACCAGA
CTGTTGGAAGACACGGGCAATCAGGCGGGAGCCGGAGGAGGAGGAGCAGC
AGTACAAGGACACACAGATGCCCTGGACATTATTTGTGTACACCCTAGCC
ATCTGGCTAGTAGGACTGGGGGGAGTGCTTGCCCCCTTATGTATGGCCTC
CTATAACAAAGTGGTCCTCACACTTTGCAACAGCCTTGCGGCGGGTGTCA
TGCTCTCGGCCGGGTTCGTTCATTTACTCCACGACGCCGTCTCCTCCCTC
GCGGGCCTGCAAACGAAAATGAACGGCTACCCCGTCAGTGAATTTGTCTG
TGCCTTGTCGTTTATTTGCGTTTTCTATATCGAGACGTTGGTTTCCCCGC
CGGTCAAACCGGGGGAACACCATCATCTTGATCATATTCAGGCCTTACCC
TCGGCACCACCATGCTCCTCGCCGAAGCGAGCCAGACGGAATTCCTGGGC
ACGGCCCTGCTCTTCTCAGTAGCTACCCCTTTAGGGGTGGGTTTAGGAGC
GTTGATTTCCTCCTACTGTAAGTCAGCAGAGGCTTTGGGTCTCATGGCTG
CCATCGCGGCAGGGACATTCATTCACGTGGCGGCGATTGAAATCATCCCG
TCGGCGTTCCGGGACACCAGCGCCACGCATCTTGCGAAATTGGCGTCCTT
GACGGTGGGTTTTTTGGCAATGTCGGCCTTGTTTCTGGTAGAGTAAGGAC
TTGGGCTTGCCACGGCCACGACGCAAAATGATGCGACGCAAGTAGGGGTC
TTCATCGCGATTCTGGCGCACAAAGGATTAGCAGCGCAAATGCACTCTCA
AACTCATTCTTACGGCCACGGCCACGGGCACAGCCATGAGCAAGGACACA
ATCATAGTCATACCCACGGAGATGCAGGCCCCGCAACCAGACTGTTGGAA
GACACGGGCAATCAGGCGGGAGCCGGAGGAGGAGGAGCAGCAGTACAAGG
ACACACAGATGCCCTGGACATTATTTGTGTACACCCTAGCCATCTGGCTA
GTAGGACTGGGGGGAGTGCTTGCCCCCTTATGTATGGCCTCCTATAACAA
AGTGGTCCTCACACTTTGCAACAGCCTTGCGGCGGGTGTCATGCTCTCGG
CCGGGTTCGTTCATTTACTCCACGACGCCGTCTCCTCCCTCGCGGGCCTG
CAAACGAAAATGAACGGCTACCCCGTCAGTGAATTTGTCTGTGCCTTGTC
GTTTATTTGCGTTTTCTATATCGAGACGTTGGTTTCCCCGCCGGTCAAAC
CGGGGGAACACCATCATCTTGATCATATTCAGGCCTTACCCTCGGCACCA
CCATGCTCCTCGCCGAAGCGAGCCAGACGGAATTCCTGGGCACGGCCCTG
CTCTTCTCAGTAGCTACCCCTTTAGGGGTGGGTTTAGGAGCGTTGATTTC
CTCCTACTGTAAGTCAGCAGAGGCTTTGGGTCTCATGGCTGCCATCGCGG
CAGGGACATTCATTCACGTGGCGGCGATTGAAATCATCCCGTCGGCGTTC
CGGGACACCAGCGCCACGCATCTTGCGAAATTGGCGTCCTTGACGGTGGG
TTTTTTGGCAATGTCGGCCTTGTTTCTGGTAGAGTAAGGACTTGGGCTTG
CCACGGCCACGACGCAAAATGATGCGACGCAAGTAGGGGTCTTCATCGCG
ATTCTGGCGCACAAAGGATTAGCAGCGCAAATGCACTCTCAAACTCATTC
TTACGGCCACGGCCACGGGCACAGCCATGAGCAAGGACACAATCATAGTC
ATACCCACGGAGATGCAGGCCCCGCAACCAGACTGTTGGAAGACACGGGC
AATCAGGCGGGAGCCGGAGGAGGAGGAGCAGCAGTACAAGGACACACAGA
TGCCCTGGACATTATTTGTGTACACCCTAGCCATCTGGCTAGTAGGACTG
GGGGGAGTGCTTGCCCCCTTATGTATGGCCTCCTATAACAAAGTGGTCCT
CACACTTTGCAACAGCCTTGCGGCGGGTGTCATGCTCTCGGCCGGGTTCG
TTCATTTACTCCACGACGCCGTCTCCTCCCTCGCGGGCCTGCAAACGAAA
ATGAACGGCTACCCCGTCAGTGAATTTGTCTGTGCCTTGTCGTTTATTTG
CGTTTTCTATATCGAGACGTTGGTTTCCCCGCCGGTCAAACCGGGGGAAC
ACCATCATCTTGATCATATTCAGGCCTTACCCTCGGCACCACCATGCTCC
TCGCCGAAGCGAGCCAGACGGAATTCCTGGGCACGGCCCTGCTCTTCTCA
GTAGCTACCCCTTTAGGGGTGGGTTTAGGAGCGTTGATTTCCTCCTACTG
TAAGTCAGCAGAGGCTTTGGGTCTCATGGCTGCCATCGCGGCAGGGACAT
TCATTCACGTGGCGGCGATTGAAATCATCCCGTCGGCGTTCCGGGACACC
AGCGCCACGCATCTTGCGAAATTGGCGTCCTTGACGGTGGGTTTTTTGGC
AATGTCGGCCTTGTTTCTGGTAGAGTAAGGACTTGGGCTTGCCACGGCCA
CGACGCAAAATGATGCGACGCAAGTAGGGGTCTTCATCGCGATTCTGGCG
CACAAAGGATTAGCAGCGCAAATGCACTCTCAAACTCATTCTTACGGCCA
CGGCCACGGGCACAGCCATGAGCAAGGACACAATCATAGTCATACCCACG
GAGATGCAGGCCCCGCAACCAGACTGTTGGAAGACACGGGCAATCAGGCG
GGAGCCGGAGGAGGAGGAGCAGCAGTACAAGGACACACAGATGCCCTGGA
CATTATTTGTGTACACCCTAGCCATCTGGCTAGTAGGACTGGGGGGAGTG
CTTGCCCCCTTATGTATGGCCTCCTATAACAAAGTGGTCCTCACACTTTG
CAACAGCCTTGCGGCGGGTGTCATGCTCTCGGCCGGGTTCGTTCATTTAC
TCCACGACGCCGTCTCCTCCCTCGCGGGCCTGCAAACGAAAATGAACGGC
TACCCCGTCAGTGAATTTGTCTGTGCCTTGTCGTTTATTTGCGTTTTCTA
TATCGAGACGTTGGTTTCCCCGCCGGTCAAACCGGGGGAACACCATCATC
TTGATCATATTCAGGCCTTACCCTCGGCACCACCATGCTCCTCGCCGAAG
CGAGCCAGACGGAATTCCTGGGCACGGCCCTGCTCTTCTCAGTAGCTACC
CCTTTAGGGGTGGGTTTAGGAGCGTTGATTTCCTCCTACTGTAAGTCAGC
AGAGGCTTTGGGTCTCATGGCTGCCATCGCGGCAGGGACATTCATTCACG
TGGCGGCGATTGAAATCATCCCGTCGGCGTTCCGGGACACCAGCGCCACG
CATCTTGCGAAATTGGCGTCCTTGACGGTGGGTTTTTTGGCAATGTCGGC
CTTGTTTCTGGTAGAGTAAGGACTTGGGCTTGCCACGGCCACGACGCAAA
ATGATGCGACGCAAGTAGGGGTCTTCATCGCGATTCTGGCGCACAAAGGA
TTAGCAGCGCAAATGCACTCTCAAACTCATTCTTACGGCCACGGCCACGG
GCACAGCCATGAGCAAGGACACAATCATAGTCATACCCACGGAGATGCAG
GCCCCGCAACCAGACTGTTGGAAGACACGGGCAATCAGGCGGGAGCCGGA
GGAGGAGGAGCAGCAGTACAAGGACACACAGATGCCCTGGACATTATTTG
TGTACACCCTAGCCATCTGGCTAGTAGGACTGGGGGGAGTGCTTGCCCCC
TTATGTATGGCCTCCTATAACAAAGTGGTCCTCACACTTTGCAACAGCCT
TGCGGCGGGTGTCATGCTCTCGGCCGGGTTCGTTCATTTACTCCACGACG
CCGTCTCCTCCCTCGCGGGCCTGCAAACGAAAATGAACGGCTACCCCGTC
AGTGAATTTGTCTGTGCCTTGTCGTTTATTTGCGTTTTCTATATCGAGAC
GTTGGTTTCCCCGCCGGTCAAACCGGGGGAACACCATCATCTTGATCATA
TTCAG back to top
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