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Properties
| Property Name | Value |
|---|
| TranscriptId | 311014 |
| Track | FilteredModels2 |
| ProteinId | 310928 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_43 | supercontig | scaffold_43:122408..124289 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10140 ID=mRNA_10140|Name=jgi.p|Nanoce1779_2|310928|organism=Nannochloropsis oceanica|type=mRNA|length=976bp
CCTTCATGCTTTCCTTCTTTTAATTACTAAAACATGGACAAGGAGCACTC
AGCAAAGGAGAAAGACTGTGACGACATATCTATAGAAATCGAAATCGAGC
ACCGCCCCCTCCCCCCCCCCCCAAAAATATACTCATTATTCTTACTCTCC
CCGTTCTCCTCCCGTCCTCCTTCGCCTCTCCCTGCCACCCTCCTCTCCTT
CTTTCCCTCCCTCCCTCGCCCTCCTCACTACCGCCTCCCACTCGCCCGCC
TTGCTCTTCACCGGGGCCTGTGCCCGCTCCGGCCATTCATGGTAAGATTT
CTCACACCCACATCCCGTCTTCCCTCCCTCCCTCCCTCGCCCCCCTCTTT
TCTTTCCACAAGCGAAGCAGAATTGTGCACCGCAGACACAGGTCATTTTT
TTGCAGCCCCCTTCACCGGAAATGTGAAATCCGTCAAACGGAAAAGCAGG
ACAGGGAATAGGCACAAGCCGCTTGGAGAGACAGTGCTTGATGTAAGAAA
GCGCACAATGGCGGTGAACTTTGTGTTTCCTGCATGGGAAGGTGAGAAGA
TTGGAGAGAGAGAGCGGCTCGAGACAGATGGGACAGCTGGAAGCGGGGAA
AGAAGAGGACGAGGACGAGGAGGGCGGTACAGGGATAGACATGCGTCGGA
TATGGCCTGTGTCTATGTGCCCGTGTCGAAAGAAGCAAGGAACGAGGGAA
ATGTGTGATGGGAGGATGAAGATGGAATGGAGAAGGTTTTGGGCACGTAA
AAAATTGATGACACTCACATGCACACAGTAGCTTTGTGGGAAGCGGGCGT
TAGTGTATGGATGGTGAGAACATCAGCAACTTTATGGGTGTGATGGAGAG
GATGGCCAGCAGCGGAAGGATGAAGACATGCCTACCGTCGCTAGTAAAAC
TCGGACAAGGAATAAGGGGTGAATAGGCAACATTCTATTGTTGGAAGGCT
CCCCCTCGTATGCAAGTCCTAGAGGA back to topprotein sequence of jgi.p|Nanoce1779_2|310928 >mRNA_10140-protein ID=mRNA_10140-protein|Name=jgi.p|Nanoce1779_2|310928|organism=Nannochloropsis oceanica|type=polypeptide|length=225bp
MDKEHSAKEKDCDDISIEIEIEHRPLPPPPKIYSLFLLSPFSSRPPSPLP
ATLLSFFPSLPRPPHYRLPLARLALHRGLCPLRPFMVRFLTPTSRLPSLP
PSPPSFLSTSEAELCTADTGHFFAAPFTGNVKSVKRKSRTGNRHKPLGET
VLDVRKRTMAVNFVFPAWEGEKIGERERLETDGTAGSGERRGRGRGGRYR
DRHASDMACVYVPVSKEARNEGNV* back to topmRNA from alignment at scaffold_43:122408..124289+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10140 ID=mRNA_10140|Name=jgi.p|Nanoce1779_2|310928|organism=Nannochloropsis oceanica|type=mRNA|length=1882bp|location=Sequence derived from alignment at scaffold_43:122408..124289+ (Nannochloropsis oceanica)
CCTTCATGCTTTCCTTCTTTTAATTACTAAAACATGGACAAGGAGCACTC
AGCAAAGGAGAAAGACTGTGACGACATATCTATAGAAATCGAAATCGAGC
ACCGCCCCCTCCCCCCCCCCCCAAAAATATACTCATTATTCTTACTCTCC
CCGTTCTCCTCCCGTCCTCCTTCGCCTCTCCCTGCCACCCTCCTCTCCTT
CTTTCCCTCCCTCCCTCGCCCTCCTCACTACCGCCTCCCACTCGCCCGCC
TTGCTCTTCACCGGGGCCTGTGCCCGCTCCGGCCATTCATGGTAAGATTT
CTCACACCCACATCCCGTCTTCCCTCCCTCCCTCCCTCGCCCCCCTCTTT
TCTTTCCACAAGCGAAGCAGAATTGTGCACCGCAGACACAGGTCATTTTT
TTGCAGCCCCCTTCACCGGAAATGTAGGTGAAGCATTGAGGACAAGGACG
GTAGTTCATGGCAAGGGCCATCGAATGGAGTTGTCGGTCCGAGGCGGAAC
GGAGGGAAGGGGGGAGGTAAAGTTGGTTGCACGATGGGCAGCTGACGCGT
GGAGGTTTCTGTTTGGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCCAG
TTCTGACGATGCTGGTGCTGGAAGTGCTGCTGCTACTGCTAGAGATGCTA
CTGCAGGTGATAAGGGTGCTGGTGGTGGTGGTGGTGGTGGTGCTGCTGCT
GATGGTAGTGGTGACACTGTTGTGTCTATTTTTTGTGTTTTTGCTGAAGC
CTCTCCTTCTATACCTTCTTCACTCTTCTTTTTCATTCCTATTCTCCTGA
TTTCAACAGTCTCAAATGTTTCCTTCTCTTCCTCCTTCTCCTCCTCCTCC
TCTCTATCTCCTTGCCTCTTTCCCACTTCTTTCTTCTGCTCCTCCTCCTT
CTCTCCCCCCCTCCCCTCCTTCTCCATCCCCTCCTCCTCTCTATCCCACC
TTCCCTCCTGTTCCTCCTCCTCCCCCTCCCCCTCCTCTTCCTCCACCTCC
AAAACCGTGTTACACCCAGGGGTCGGGCAAAATACCAGTCCTTTTGTCGT
TGCCACCCGTCTTTCCTCCTTCACCCTCTTGTACTGCTCTTGTTCCTCTT
CCTTCGACAGACAGCCATATACCTGCAATGTTAGGAACACAAAAGCCGAA
TTAGATGAGTATATATAAACATGTCAACTCTAGGAAGGAAATCTACGCCT
TCGTTCAAACCGAAGCGAAGGAAAGGGGAGCAGGAAGGAGTGTGGGGAAG
GATGAGAAGAGGCGGAGTTGAGGCACTGTCACTTATTCTCTTTTTCATTC
CATTTTATTAATACCTGTACATCTTTCAGGTGAAATCCGTCAAACGGAAA
AGCAGGACAGGGAATAGGCACAAGCCGCTTGGAGAGACAGTGCTTGATGT
AAGAAAGCGCACAATGGCGGTGAACTTTGTGTTTCCTGCATGGGAAGGTG
AGAAGATTGGAGAGAGAGAGCGGCTCGAGACAGATGGGACAGCTGGAAGC
GGGGAAAGAAGAGGACGAGGACGAGGAGGGCGGTACAGGGATAGACATGC
GTCGGATATGGCCTGTGTCTATGTGCCCGTGTCGAAAGAAGCAAGGAACG
AGGGAAATGTGTGATGGGAGGATGAAGATGGAATGGAGAAGGTTTTGGGC
ACGTAAAAAATTGATGACACTCACATGCACACAGTAGCTTTGTGGGAAGC
GGGCGTTAGTGTATGGATGGTGAGAACATCAGCAACTTTATGGGTGTGAT
GGAGAGGATGGCCAGCAGCGGAAGGATGAAGACATGCCTACCGTCGCTAG
TAAAACTCGGACAAGGAATAAGGGGTGAATAGGCAACATTCTATTGTTGG
AAGGCTCCCCCTCGTATGCAAGTCCTAGAGGA back to topCoding sequence (CDS) from alignment at scaffold_43:122408..124289+ >mRNA_10140 ID=mRNA_10140|Name=jgi.p|Nanoce1779_2|310928|organism=Nannochloropsis oceanica|type=CDS|length=1350bp|location=Sequence derived from alignment at scaffold_43:122408..124289+ (Nannochloropsis oceanica)
ATGGACAAGGAGCACTCAGCAAAGGAGAAAGACTGTGACGACATATCTAT
AGAAATCGAAATCGAGCACCGCCCCCTCCCCCCCCCCCCAAAAATATACT
CATTATTCTTACTCTCCCCGTTCTCCTCCCGTCCTCCTTCGCCTCTCCCT
GCCACCCTCCTCTCCTTCTTTCCCTCCCTCCCTCGCCCTCCTCACTACCG
CCTCCCACTCGCCCGCCTTGCTCTTCACCGGGGCCTGTGCCCGCTCCGGC
CATTCATGGTAAGATTTCTCACACCCACATCCCGTCTTCCCTCCCTCCCT
CCCTCGCCCCCCTCTTTTCTTTCCACAAGCGAAGCAGAATTGTGCACCGC
AGACACAGGTCATTTTTTTGCAGCCCCCTTCACCGGAAATGTGAAATCCG
TCAAACGGAAAAGCAGGACAGGGAATAGGCACAAGCCGCTTGGAGAGACA
GTGCTTGATGTAAGAAAGCGCACAATGGCGGTGAACTTTGTGTTTCCTGC
ATGGGAAGGTGAGAAGATTGGAGAGAGAGAGCGGCTCGAGACAGATGGGA
CAGCTGGAAGCGGGGAAAGAAGAGGACGAGGACGAGGAGGGCGGTACAGG
GATAGACATGCGTCGGATATGGCCTGTGTCTATGTGCCCGTGTCGAAAGA
AGCAAGGAACGAGGGAAATGTGTGAATGGACAAGGAGCACTCAGCAAAGG
AGAAAGACTGTGACGACATATCTATAGAAATCGAAATCGAGCACCGCCCC
CTCCCCCCCCCCCCAAAAATATACTCATTATTCTTACTCTCCCCGTTCTC
CTCCCGTCCTCCTTCGCCTCTCCCTGCCACCCTCCTCTCCTTCTTTCCCT
CCCTCCCTCGCCCTCCTCACTACCGCCTCCCACTCGCCCGCCTTGCTCTT
CACCGGGGCCTGTGCCCGCTCCGGCCATTCATGGTAAGATTTCTCACACC
CACATCCCGTCTTCCCTCCCTCCCTCCCTCGCCCCCCTCTTTTCTTTCCA
CAAGCGAAGCAGAATTGTGCACCGCAGACACAGGTCATTTTTTTGCAGCC
CCCTTCACCGGAAATGTGAAATCCGTCAAACGGAAAAGCAGGACAGGGAA
TAGGCACAAGCCGCTTGGAGAGACAGTGCTTGATGTAAGAAAGCGCACAA
TGGCGGTGAACTTTGTGTTTCCTGCATGGGAAGGTGAGAAGATTGGAGAG
AGAGAGCGGCTCGAGACAGATGGGACAGCTGGAAGCGGGGAAAGAAGAGG
ACGAGGACGAGGAGGGCGGTACAGGGATAGACATGCGTCGGATATGGCCT
GTGTCTATGTGCCCGTGTCGAAAGAAGCAAGGAACGAGGGAAATGTGTGA back to top
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