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Properties
| Property Name | Value |
|---|
| TranscriptId | 611974 |
| Track | FilteredModels2 |
| ProteinId | 611888 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:14053..15236 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10298 ID=mRNA_10298|Name=jgi.p|Nanoce1779_2|611888|organism=Nannochloropsis oceanica|type=mRNA|length=1184bp
ACAGATGCTCCCCTCCTCCTCCTTCTTTCGCCAGCATATTCGTCTCCGCG
TTCGTCCCAATCCCGTTACCGCCGCTGCCGGTGCTGTGTTTGCTGCCACG
GCGCTCGTGCTCGCCTCCTCTCCATCCTGCTACTGTCAGGCCTTCATCTC
CCCATCGCCATCCCGCTGCTCCATTTTCAACGCCAGAAGATCTCTGCGCA
TGTTTTCATCAAGCAATGACAATGATTGCGTCCACTCCGTTGCGGGGCTT
CGGGATATTGCCCATCACTACGATGTCTTTCTCATCGATCAATGGGGGGT
CATGCACGACGGCTACAATGCATACCCACAAGCCGTCGCTTGCATGGAAC
AGCTCCTTGCCCTCGGCAAGCATGTGATACTCCTCTCTAACTCCTCCAAA
CGCAAGGCCGGCTCTCTCGTCCGACTGGTCGAGATGGGCTTCACCCCAGA
CAAGTACCTTGACGTCGTCACCTCCGGTGAGCTCACTTTTCTCGGTCTCT
CCCCTCCACGCACCTCCTCTCCTTACACAAAGATCCAAGGGAGGCGCGTT
CTCGTCTTTGGATCTGGAGATGATGACCGCGACTATGTCCAGTCAATGGG
TTGCAGAATTGCCTCCTTGGAAGAAGCAGATTTCCTCCTAGCACGAGGCC
CGTTTGTTATACTCGAGTCCTCTGATCCTTCCATCCCGCCACTCCGATTT
GGCCCTGGCCGCATCTTGCACGAGAGCGCCGAATTCGACGCGTTAGCCAC
TAAGGCAGTAGAAAGGGGACTGCCAATGATTGTGTCCAACCCTGATATTG
TGAGGCCCGGTGGGGACAATGACCCTATGCCCGGCATGATCGGGCAGGCT
TATGAGAAGAAGGGGGGAAGGGTCATCTACGTTGGCAAGCCCTACCCCTT
GGTTTATGCCCATTGCCGCGAGCTTATGGAGGAAGTGGTGGGAAAGGAGG
GAGGGTTGTCAGAGTTGAAGATGTGTGCGATCGGAGACTCAATGTGGAAT
GATATAAAGGGGGCAGTGGACCAGGAGATTGCTTCTATCCTCGTCACGGA
CGGGATCCACGCCCAGGCCTTGGGGGTCGAGCAGGGGTCAGGAAAAACTG
TTAGAGAGAAGGCACTGAACAGGTTTTGGGAAGGATTTTCGTTCAAGCCT
ACGCATACGGTGCCATGCTTTAGGTGGTGAGGTG back to topprotein sequence of jgi.p|Nanoce1779_2|611888 >mRNA_10298-protein ID=mRNA_10298-protein|Name=jgi.p|Nanoce1779_2|611888|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MLPSSSFFRQHIRLRVRPNPVTAAAGAVFAATALVLASSPSCYCQAFISP
SPSRCSIFNARRSLRMFSSSNDNDCVHSVAGLRDIAHHYDVFLIDQWGVM
HDGYNAYPQAVACMEQLLALGKHVILLSNSSKRKAGSLVRLVEMGFTPDK
YLDVVTSGELTFLGLSPPRTSSPYTKIQGRRVLVFGSGDDDRDYVQSMGC
RIASLEEADFLLARGPFVILESSDPSIPPLRFGPGRILHESAEFDALATK
AVERGLPMIVSNPDIVRPGGDNDPMPGMIGQAYEKKGGRVIYVGKPYPLV
YAHCRELMEEVVGKEGGLSELKMCAIGDSMWNDIKGAVDQEIASILVTDG
IHAQALGVEQGSGKTVREKALNRFWEGFSFKPTHTVPCFRW* back to topmRNA from alignment at scaffold_60:14053..15236- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10298 ID=mRNA_10298|Name=jgi.p|Nanoce1779_2|611888|organism=Nannochloropsis oceanica|type=mRNA|length=1184bp|location=Sequence derived from alignment at scaffold_60:14053..15236- (Nannochloropsis oceanica)
ACAGATGCTCCCCTCCTCCTCCTTCTTTCGCCAGCATATTCGTCTCCGCG
TTCGTCCCAATCCCGTTACCGCCGCTGCCGGTGCTGTGTTTGCTGCCACG
GCGCTCGTGCTCGCCTCCTCTCCATCCTGCTACTGTCAGGCCTTCATCTC
CCCATCGCCATCCCGCTGCTCCATTTTCAACGCCAGAAGATCTCTGCGCA
TGTTTTCATCAAGCAATGACAATGATTGCGTCCACTCCGTTGCGGGGCTT
CGGGATATTGCCCATCACTACGATGTCTTTCTCATCGATCAATGGGGGGT
CATGCACGACGGCTACAATGCATACCCACAAGCCGTCGCTTGCATGGAAC
AGCTCCTTGCCCTCGGCAAGCATGTGATACTCCTCTCTAACTCCTCCAAA
CGCAAGGCCGGCTCTCTCGTCCGACTGGTCGAGATGGGCTTCACCCCAGA
CAAGTACCTTGACGTCGTCACCTCCGGTGAGCTCACTTTTCTCGGTCTCT
CCCCTCCACGCACCTCCTCTCCTTACACAAAGATCCAAGGGAGGCGCGTT
CTCGTCTTTGGATCTGGAGATGATGACCGCGACTATGTCCAGTCAATGGG
TTGCAGAATTGCCTCCTTGGAAGAAGCAGATTTCCTCCTAGCACGAGGCC
CGTTTGTTATACTCGAGTCCTCTGATCCTTCCATCCCGCCACTCCGATTT
GGCCCTGGCCGCATCTTGCACGAGAGCGCCGAATTCGACGCGTTAGCCAC
TAAGGCAGTAGAAAGGGGACTGCCAATGATTGTGTCCAACCCTGATATTG
TGAGGCCCGGTGGGGACAATGACCCTATGCCCGGCATGATCGGGCAGGCT
TATGAGAAGAAGGGGGGAAGGGTCATCTACGTTGGCAAGCCCTACCCCTT
GGTTTATGCCCATTGCCGCGAGCTTATGGAGGAAGTGGTGGGAAAGGAGG
GAGGGTTGTCAGAGTTGAAGATGTGTGCGATCGGAGACTCAATGTGGAAT
GATATAAAGGGGGCAGTGGACCAGGAGATTGCTTCTATCCTCGTCACGGA
CGGGATCCACGCCCAGGCCTTGGGGGTCGAGCAGGGGTCAGGAAAAACTG
TTAGAGAGAAGGCACTGAACAGGTTTTGGGAAGGATTTTCGTTCAAGCCT
ACGCATACGGTGCCATGCTTTAGGTGGTGAGGTG back to topCoding sequence (CDS) from alignment at scaffold_60:14053..15236- >mRNA_10298 ID=mRNA_10298|Name=jgi.p|Nanoce1779_2|611888|organism=Nannochloropsis oceanica|type=CDS|length=1176bp|location=Sequence derived from alignment at scaffold_60:14053..15236- (Nannochloropsis oceanica)
ATGCTCCCCTCCTCCTCCTTCTTTCGCCAGCATATTCGTCTCCGCGTTCG
TCCCAATCCCGTTACCGCCGCTGCCGGTGCTGTGTTTGCTGCCACGGCGC
TCGTGCTCGCCTCCTCTCCATCCTGCTACTGTCAGGCCTTCATCTCCCCA
TCGCCATCCCGCTGCTCCATTTTCAACGCCAGAAGATCTCTGCGCATGTT
TTCATCAAGCAATGACAATGATTGCGTCCACTCCGTTGCGGGGCTTCGGG
ATATTGCCCATCACTACGATGTCTTTCTCATCGATCAATGGGGGGTCATG
CACGACGGCTACAATGCATACCCACAAGCCGTCGCTTGCATGGAACAGCT
CCTTGCCCTCGGCAAGCATGTGATACTCCTCTCTAACTCCTCCAAACGCA
AGGCCGGCTCTCTCGTCCGACTGGTCGAGATGGGCTTCACCCCAGACAAG
TACCTTGACGTCGTCACCTCCGGTGAGCTCACTTTTCTCGGTCTCTCCCC
TCCACGCACCTCCTCTCCTTACACAAAGATCCAAGGGAGGCGCGTTCTCG
TCTTTGGATCTGGAGATGATGACCGCGACTATGTCCAGTCAATGGGTTGC
AGAATTGCCTCCTTGGAAGAAGCAGATTTCCTCCTAGCACGAGGCCCGTT
TGTTATACTCGAGTCCTCTGATCCTTCCATCCCGCCACTCCGATTTGGCC
CTGGCCGCATCTTGCACGAGAGCGCCGAATTCGACGCGTTAGCCACTAAG
GCAGTAGAAAGGGGACTGCCAATGATTGTGTCCAACCCTGATATTGTGAG
GCCCGGTGGGGACAATGACCCTATGCCCGGCATGATCGGGCAGGCTTATG
AGAAGAAGGGGGGAAGGGTCATCTACGTTGGCAAGCCCTACCCCTTGGTT
TATGCCCATTGCCGCGAGCTTATGGAGGAAGTGGTGGGAAAGGAGGGAGG
GTTGTCAGAGTTGAAGATGTGTGCGATCGGAGACTCAATGTGGAATGATA
TAAAGGGGGCAGTGGACCAGGAGATTGCTTCTATCCTCGTCACGGACGGG
ATCCACGCCCAGGCCTTGGGGGTCGAGCAGGGGTCAGGAAAAACTGTTAG
AGAGAAGGCACTGAACAGGTTTTGGGAAGGATTTTCGTTCAAGCCTACGC
ATACGGTGCCATGCTTTAGGTGGTGA back to top
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