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Properties
| Property Name | Value |
|---|
| TranscriptId | 612109 |
| Track | FilteredModels2 |
| ProteinId | 612023 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_61 | supercontig | scaffold_61:33511..36122 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10648 ID=mRNA_10648|Name=jgi.p|Nanoce1779_2|612023|organism=Nannochloropsis oceanica|type=mRNA|length=2302bp
CCTTATTTCCCTCTGGCGGCAAGAGTCTTGCCCTCTCCCATTTCAAGGTT
TTCTGCTTTTTCCTCTGACCACAACGCTGTGCGATGTTGTTTCCTTGAAC
CCGTACAGCCAAAGGGTTTCAAATTATAAGTCTACCAAACGACCGGGGTG
GCTTGGCACTTCAATTTATTCGTCGACCCGTGCCGCCCGCGAAGTTTTCT
CCCTAAAGTTTGTCCTCCTCAACACCTATCCACGATCTCACGGATAACAA
TAAATATGGATGAATTATAGGGATCGCTCAAAAAAAAGAATCGTCATGAT
TAGGTCTTTGGCCTCTTGAAGGAAATTCGCAAGCTTCCCTTCACTGGACC
GTAGAACTCATCCTTTTGCTATATAGCAATTTTCAAACGCGCCCTTTGGC
ACGTAACGCAGGCCTATTTTGGGCGCCAAGCAAAAAGCAAAATTGCTTAA
CCACGCCCGAGCTCACGCATAGCTGTGCTACGACCCATAAACATGCAAAA
CACAGGCACAAGCAGAGCACAGACACGGGCGGCTAGGATCTAACGAGATC
CTCGCCACTTTCACCATCCTTCTCAGACGAACGAAGCAAGCCTCCGTGCT
CAAGACACACACAACATCACGCCGCGCTCGTTCAGCAGCAGTGCCGCTGC
CAATACCTCGTCTACGAAAACAAGGAATATGGTTTTGTCCACACGGCAGC
CAAGGCCTGCCTTGTTGTCCTCACGGCGGCGACTTAATTCTCCCAACACC
GCGGACGATCCTTCTCCCTCCTCACCGCGGTACTCACGGCTTCTGACCCG
TGTCACGGAACTGGAGGCAGCGCTCGAGGCTGCGACGAAGGCTCCACCCA
TCGAGCAAAGCAGGTTCCAAAGACTAAAGGAAAAGCATGTCGCCACCAAG
GCAGCTCTTGTGGAACTCATGGCCCAAAAAACAGAGCTCGAACAGCAAGC
TGAAGCCACGCTGGCCAAATGGCAGGCACACCATGAACAGCAGGTGTACG
AGCTGGCCACTTGTCAGCAACAAGCCCAGCAATTGGCCGAGCTCCCCGCC
CTTCGCGCAGAGTGGACTCGGAGAGTACAAGCTCTAGAGGCCGAGGCAGG
TACATACCGCTCGCTGTACGACGAGGCGCGGCAAGACAGTGAGAAAAATA
AGCGGGAATTCATTGCAGTAGTGGAGGATCAGGCTCACGCCCACGAGACA
CATCTCCGGGCTGCCCGCGAAGAGGTGGATAAGTGGCAGGCGCGTTGTCG
GGCATTAGAGGAGGCGGCCGCAGAAGCGCGAAGCCGCGATGAGGTACTGC
GGCAACAGGAAGGGAAGCTGGAGGTATGGCAGGCGGCGCTTAGGGAAAGC
GAGGCCATGGCCCAGAAGGCGGAGGAGGGAAGGGCGCGCGCCGAAGCGCG
GATTCAGCGTGCTGAGGTGGCTCACGAGGTTGCGCTCAATGAGTGGATGG
CCAAGTTGGTGGCGGCGACGAGCGAAAAAAGTGGGCTGGCGGCTCGCCTT
GAAAGTGTTGCGGTTGAGCTGGACCACGTTAAGAGCCAGCTACGGGAGCG
ACGCCACGAAGCAGAATTGGCGGTAGAAGAAGCTGGGCGTTTGCGCGAGG
CTTTGCGCACAGCAGAGCAGGCGGAAGAAGAAACACGACGGCAGTCGGAG
CGAGAGAGAGAAGCGGCGCGGCGTGTCTGGCAGGAGGAGAAGGAGGAGTG
GGAAAGTCGAGTGCGGGAGTTCGAGGCCCGGGCCCTTCAAGCAGAGGCCG
AGGCGCGGGAAGCGGCTCGTGACGCGCTCGCCCACGAGCGTGAAACGATT
ACGGCTGAGACAAAGGCTCGGCAGACGACAGGAAGCGAGATAAGGCGGCT
GCAGGAGGAGATCGCGCACTTGAAGGAGGTGCTAGAGGACGAGCGGGTGA
GGGCCATCAAGGTGGAGAACGACTGGAAGTACATCGTCAGAGACCTGCAA
CAACGACAAACACTCGCACCGGTGCAAACCTTAGCGGCGGTATGGGCACG
ACCACCTGCGGCTGCAACAACTGTAACGGCAGCGGGTGCAGATACGTCGG
TGGCAAATGAGAAAGCAGCTGCTGAGTGGGAGGAGAGAAGGGAGGACAAA
GGCGGGGATATAGGGATATCGAAAATGGAGCTTGAAAAAGTGAAATTACG
GTGCATGCTGGCGATTCAAAAGGCAGAGCGCCGGGCGGAGGCCTACAAAC
GTAAGTGTTTGGAGCTGCACGAGCGGTGGAAGGCGGGCAGTGTAGTCGAA
GGATTGTAAAAAAAATAAGGAAAGAAATAGTGCCACAGCCACAGCCTTGT
CT back to topprotein sequence of jgi.p|Nanoce1779_2|612023 >mRNA_10648-protein ID=mRNA_10648-protein|Name=jgi.p|Nanoce1779_2|612023|organism=Nannochloropsis oceanica|type=polypeptide|length=527bp
MVLSTRQPRPALLSSRRRLNSPNTADDPSPSSPRYSRLLTRVTELEAALE
AATKAPPIEQSRFQRLKEKHVATKAALVELMAQKTELEQQAEATLAKWQA
HHEQQVYELATCQQQAQQLAELPALRAEWTRRVQALEAEAGTYRSLYDEA
RQDSEKNKREFIAVVEDQAHAHETHLRAAREEVDKWQARCRALEEAAAEA
RSRDEVLRQQEGKLEVWQAALRESEAMAQKAEEGRARAEARIQRAEVAHE
VALNEWMAKLVAATSEKSGLAARLESVAVELDHVKSQLRERRHEAELAVE
EAGRLREALRTAEQAEEETRRQSEREREAARRVWQEEKEEWESRVREFEA
RALQAEAEAREAARDALAHERETITAETKARQTTGSEIRRLQEEIAHLKE
VLEDERVRAIKVENDWKYIVRDLQQRQTLAPVQTLAAVWARPPAAATTVT
AAGADTSVANEKAAAEWEERREDKGGDIGISKMELEKVKLRCMLAIQKAE
RRAEAYKRKCLELHERWKAGSVVEGL* back to topmRNA from alignment at scaffold_61:33511..36122- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10648 ID=mRNA_10648|Name=jgi.p|Nanoce1779_2|612023|organism=Nannochloropsis oceanica|type=mRNA|length=2612bp|location=Sequence derived from alignment at scaffold_61:33511..36122- (Nannochloropsis oceanica)
CCTTATTTCCCTCTGGCGGCAAGAGTCTTGCCCTCTCCCATTTCAAGGTT
TTCTGCTTTTTCCTCTGACCACAACGCTGTGCGATGTTGTTTCCTTGAAC
CCGTACAGCCAAAGGGTTTCAAATTATAAGTCTACCAAACGACCGGGGTG
GCTTGGCACTTCAATTTATTCGTCGACCCGTGCCGCCCGCGAAGTTTTCT
CCCTAAAGTTTGTCCTCCTCAACACCTATCCACGATCTCACGGATAACAA
TAAATATGGATGAATTATAGGGATCGCTCAAAAAAAAGAATCGTCATGAT
TAGGTCTTTGGCCTCTTGAAGGAAATTCGCAAGCTTCCCTTCACTGGACC
GTAGAACTCATCCTTTTGCTATATAGCAATTTTCAAACGCGCCCTTTGGC
ACGTAACGCAGGCCTATTTTGGGCGCCAAGCAAAAAGCAAAATTGCTTAA
CCACGCCCGAGCTCACGCATAGCTGTGCTACGACCCATAAACATGCAAAA
CACAGGCACAAGCAGAGCACAGACACGGGCGGCTAGGATCTAACGAGATC
CTCGCCACTTTCACCATCCTTCTCAGACGAACGAAGCAAGCCTCCGTGCT
CAAGACACACACAACATCACGCCGCGCTCGTTCAGCAGCAGTGCCGCTGC
CAATACCTCGTCTACGAAAACAAGGAATATGGTTTTGTCCACACGGCAGC
CAAGGCCTGCCTTGTTGTCCTCACGGCGGCGACTTAATTCTCCCAACACC
GCGGACGATCCTTCTCCCTCCTCACCGCGGTACTCACGGCTTCTGACCCG
TGTCACGGAACTGGAGGCAGCGCTCGAGGCTGCGACGAAGGCTCCACCCA
TCGAGCAAAGCAGGTTCCAAAGACTAAAGGAAAAGCATGTCGCCACCAAG
GCAGCTCTTGTGGAACTCATGGCCCAAAAAACAGAGCTCGAACAGCAAGC
TGAAGCCACGCTGGCCAAATGGCAGGCACACCATGAACAGCAGGTGTACG
AGCTGGCCACTTGTCAGGTATGCTATTTCTTGTGAGAGTTGGGTGCTGCT
CGTGCTCAGGAGGAAGTTCTTGTTTGCCTCGGTGTTTTTTCTTCCTCTTT
CTAGATTAAGTTTCTGCCTCTTCGCTCTCGCCGTCCTTCTCTTTCCGCCG
GGTTAGACTCCATCCTCACTATCTTCCCCCAAAGCCCACCAGTAATCCAC
TCACTCAACCTCATCTCATAAGAATCAACTTCAACCTTATCACTACCGTC
TGCTCATCGTTTCCCCCCCCCATTGATCATGCACTCCTTCAATTCCTCCC
CGTTCGCTCCATGCCAATCATCCACAGCAACAAGCCCAGCAATTGGCCGA
GCTCCCCGCCCTTCGCGCAGAGTGGACTCGGAGAGTACAAGCTCTAGAGG
CCGAGGCAGGTACATACCGCTCGCTGTACGACGAGGCGCGGCAAGACAGT
GAGAAAAATAAGCGGGAATTCATTGCAGTAGTGGAGGATCAGGCTCACGC
CCACGAGACACATCTCCGGGCTGCCCGCGAAGAGGTGGATAAGTGGCAGG
CGCGTTGTCGGGCATTAGAGGAGGCGGCCGCAGAAGCGCGAAGCCGCGAT
GAGGTACTGCGGCAACAGGAAGGGAAGCTGGAGGTATGGCAGGCGGCGCT
TAGGGAAAGCGAGGCCATGGCCCAGAAGGCGGAGGAGGGAAGGGCGCGCG
CCGAAGCGCGGATTCAGCGTGCTGAGGTGGCTCACGAGGTTGCGCTCAAT
GAGTGGATGGCCAAGTTGGTGGCGGCGACGAGCGAAAAAAGTGGGCTGGC
GGCTCGCCTTGAAAGTGTTGCGGTTGAGCTGGACCACGTTAAGAGCCAGC
TACGGGAGCGACGCCACGAAGCAGAATTGGCGGTAGAAGAAGCTGGGCGT
TTGCGCGAGGCTTTGCGCACAGCAGAGCAGGCGGAAGAAGAAACACGACG
GCAGTCGGAGCGAGAGAGAGAAGCGGCGCGGCGTGTCTGGCAGGAGGAGA
AGGAGGAGTGGGAAAGTCGAGTGCGGGAGTTCGAGGCCCGGGCCCTTCAA
GCAGAGGCCGAGGCGCGGGAAGCGGCTCGTGACGCGCTCGCCCACGAGCG
TGAAACGATTACGGCTGAGACAAAGGCTCGGCAGACGACAGGAAGCGAGA
TAAGGCGGCTGCAGGAGGAGATCGCGCACTTGAAGGAGGTGCTAGAGGAC
GAGCGGGTGAGGGCCATCAAGGTGGAGAACGACTGGAAGTACATCGTCAG
AGACCTGCAACAACGACAAACACTCGCACCGGTGCAAACCTTAGCGGCGG
TATGGGCACGACCACCTGCGGCTGCAACAACTGTAACGGCAGCGGGTGCA
GATACGTCGGTGGCAAATGAGAAAGCAGCTGCTGAGTGGGAGGAGAGAAG
GGAGGACAAAGGCGGGGATATAGGGATATCGAAAATGGAGCTTGAAAAAG
TGAAATTACGGTGCATGCTGGCGATTCAAAAGGCAGAGCGCCGGGCGGAG
GCCTACAAACGTAAGTGTTTGGAGCTGCACGAGCGGTGGAAGGCGGGCAG
TGTAGTCGAAGGATTGTAAAAAAAATAAGGAAAGAAATAGTGCCACAGCC
ACAGCCTTGTCT back to topCoding sequence (CDS) from alignment at scaffold_61:33511..36122- >mRNA_10648 ID=mRNA_10648|Name=jgi.p|Nanoce1779_2|612023|organism=Nannochloropsis oceanica|type=CDS|length=3162bp|location=Sequence derived from alignment at scaffold_61:33511..36122- (Nannochloropsis oceanica)
CAACAAGCCCAGCAATTGGCCGAGCTCCCCGCCCTTCGCGCAGAGTGGAC
TCGGAGAGTACAAGCTCTAGAGGCCGAGGCAGGTACATACCGCTCGCTGT
ACGACGAGGCGCGGCAAGACAGTGAGAAAAATAAGCGGGAATTCATTGCA
GTAGTGGAGGATCAGGCTCACGCCCACGAGACACATCTCCGGGCTGCCCG
CGAAGAGGTGGATAAGTGGCAGGCGCGTTGTCGGGCATTAGAGGAGGCGG
CCGCAGAAGCGCGAAGCCGCGATGAGGTACTGCGGCAACAGGAAGGGAAG
CTGGAGGTATGGCAGGCGGCGCTTAGGGAAAGCGAGGCCATGGCCCAGAA
GGCGGAGGAGGGAAGGGCGCGCGCCGAAGCGCGGATTCAGCGTGCTGAGG
TGGCTCACGAGGTTGCGCTCAATGAGTGGATGGCCAAGTTGGTGGCGGCG
ACGAGCGAAAAAAGTGGGCTGGCGGCTCGCCTTGAAAGTGTTGCGGTTGA
GCTGGACCACGTTAAGAGCCAGCTACGGGAGCGACGCCACGAAGCAGAAT
TGGCGGTAGAAGAAGCTGGGCGTTTGCGCGAGGCTTTGCGCACAGCAGAG
CAGGCGGAAGAAGAAACACGACGGCAGTCGGAGCGAGAGAGAGAAGCGGC
GCGGCGTGTCTGGCAGGAGGAGAAGGAGGAGTGGGAAAGTCGAGTGCGGG
AGTTCGAGGCCCGGGCCCTTCAAGCAGAGGCCGAGGCGCGGGAAGCGGCT
CGTGACGCGCTCGCCCACGAGCGTGAAACGATTACGGCTGAGACAAAGGC
TCGGCAGACGACAGGAAGCGAGATAAGGCGGCTGCAGGAGGAGATCGCGC
ACTTGAAGGAGGTGCTAGAGGACGAGCGGGTGAGGGCCATCAAGGTGGAG
AACGACTGGAAGTACATCGTCAGAGACCTGCAACAACGACAAACACTCGC
ACCGGTGCAAACCTTAGCGGCGGTATGGGCACGACCACCTGCGGCTGCAA
CAACTGTAACGGCAGCGGGTGCAGATACGTCGGTGGCAAATGAGAAAGCA
GCTGCTGAGTGGGAGGAGAGAAGGGAGGACAAAGGCGGGGATATAGGGAT
ATCGAAAATGGAGCTTGAAAAAGTGAAATTACGGTGCATGCTGGCGATTC
AAAAGGCAGAGCGCCGGGCGGAGGCCTACAAACGTAAGTGTTTGGAGCTG
CACGAGCGGTGGAAGGCGGGCAGTGTAGTCGAAGGATTGTAAATGGTTTT
GTCCACACGGCAGCCAAGGCCTGCCTTGTTGTCCTCACGGCGGCGACTTA
ATTCTCCCAACACCGCGGACGATCCTTCTCCCTCCTCACCGCGGTACTCA
CGGCTTCTGACCCGTGTCACGGAACTGGAGGCAGCGCTCGAGGCTGCGAC
GAAGGCTCCACCCATCGAGCAAAGCAGGTTCCAAAGACTAAAGGAAAAGC
ATGTCGCCACCAAGGCAGCTCTTGTGGAACTCATGGCCCAAAAAACAGAG
CTCGAACAGCAAGCTGAAGCCACGCTGGCCAAATGGCAGGCACACCATGA
ACAGCAGGTGTACGAGCTGGCCACTTGTCAGCAACAAGCCCAGCAATTGG
CCGAGCTCCCCGCCCTTCGCGCAGAGTGGACTCGGAGAGTACAAGCTCTA
GAGGCCGAGGCAGGTACATACCGCTCGCTGTACGACGAGGCGCGGCAAGA
CAGTGAGAAAAATAAGCGGGAATTCATTGCAGTAGTGGAGGATCAGGCTC
ACGCCCACGAGACACATCTCCGGGCTGCCCGCGAAGAGGTGGATAAGTGG
CAGGCGCGTTGTCGGGCATTAGAGGAGGCGGCCGCAGAAGCGCGAAGCCG
CGATGAGGTACTGCGGCAACAGGAAGGGAAGCTGGAGGTATGGCAGGCGG
CGCTTAGGGAAAGCGAGGCCATGGCCCAGAAGGCGGAGGAGGGAAGGGCG
CGCGCCGAAGCGCGGATTCAGCGTGCTGAGGTGGCTCACGAGGTTGCGCT
CAATGAGTGGATGGCCAAGTTGGTGGCGGCGACGAGCGAAAAAAGTGGGC
TGGCGGCTCGCCTTGAAAGTGTTGCGGTTGAGCTGGACCACGTTAAGAGC
CAGCTACGGGAGCGACGCCACGAAGCAGAATTGGCGGTAGAAGAAGCTGG
GCGTTTGCGCGAGGCTTTGCGCACAGCAGAGCAGGCGGAAGAAGAAACAC
GACGGCAGTCGGAGCGAGAGAGAGAAGCGGCGCGGCGTGTCTGGCAGGAG
GAGAAGGAGGAGTGGGAAAGTCGAGTGCGGGAGTTCGAGGCCCGGGCCCT
TCAAGCAGAGGCCGAGGCGCGGGAAGCGGCTCGTGACGCGCTCGCCCACG
AGCGTGAAACGATTACGGCTGAGACAAAGGCTCGGCAGACGACAGGAAGC
GAGATAAGGCGGCTGCAGGAGGAGATCGCGCACTTGAAGGAGGTGCTAGA
GGACGAGCGGGTGAGGGCCATCAAGGTGGAGAACGACTGGAAGTACATCG
TCAGAGACCTGCAACAACGACAAACACTCGCACCGGTGCAAACCTTAGCG
GCGGTATGGGCACGACCACCTGCGGCTGCAACAACTGTAACGGCAGCGGG
TGCAGATACGTCGGTGGCAAATGAGAAAGCAGCTGCTGAGTGGGAGGAGA
GAAGGGAGGACAAAGGCGGGGATATAGGGATATCGAAAATGGAGCTTGAA
AAAGTGAAATTACGGTGCATGCTGGCGATTCAAAAGGCAGAGCGCCGGGC
GGAGGCCTACAAACGTAAGTGTTTGGAGCTGCACGAGCGGTGGAAGGCGG
GCAGTGTAGTCGAAGGATTGTAAATGGTTTTGTCCACACGGCAGCCAAGG
CCTGCCTTGTTGTCCTCACGGCGGCGACTTAATTCTCCCAACACCGCGGA
CGATCCTTCTCCCTCCTCACCGCGGTACTCACGGCTTCTGACCCGTGTCA
CGGAACTGGAGGCAGCGCTCGAGGCTGCGACGAAGGCTCCACCCATCGAG
CAAAGCAGGTTCCAAAGACTAAAGGAAAAGCATGTCGCCACCAAGGCAGC
TCTTGTGGAACTCATGGCCCAAAAAACAGAGCTCGAACAGCAAGCTGAAG
CCACGCTGGCCAAATGGCAGGCACACCATGAACAGCAGGTGTACGAGCTG
GCCACTTGTCAG back to top
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