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Properties
| Property Name | Value |
|---|
| TranscriptId | 629809 |
| Track | FilteredModels2 |
| ProteinId | 629723 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:718348..719356 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4049 ID=mRNA_4049|Name=jgi.p|Nanoce1779_2|629723|organism=Nannochloropsis oceanica|type=mRNA|length=772bp
GCAGCATTTCTTTCTGCACACCATGTCGCTCTGCCCAACCGACAAACAAG
GGCACGCCTTGGTTGCCAGGCGCAACCTTTGCCAGCTGTTCGAGGCTCAC
CCCTGTCTGCAGCAGCCGCGATACCATAAATTGGGATTGCGCATCACTCT
TCCTTCTACGGAGCAATCGCAATCACGATCCGAAAGGTTTGAATCTCAGA
GGTCAACTGGAACCAGGTTTCGCGGCCGCCGTTCGCACGGCGACGAAGAA
TATGTCTTCCTTGGCGATGATGAGAAGGAGGGGTGTGCTAGCGGCAGCGA
CATAGACGACGAAGAGGACGCCACCAGCAGCATCAGCAGTGGACGGGACT
CCATGTTCTATGGAGGCAGCGCTGGTAGCGAGGAGGGGGACGAGCTGCAG
CACGAGCAGCTTGGAGAGAGCGTACCAGGCATCGGTTCATTCTACGTCAA
GCGGGACCAGGTTCTGCGGCGGCGGCGGCGGGACTTCGTGAAGCTCAAGC
GGTCGCAAAAGGCCAAAATCGTCAAGACGGCCTATTCCGTGATCGAGGCA
GTGTGCGAGACCTTTTTCCCGGGGGAGCGCATGGAGCTCCTCGACGCAAT
CACTAGTGCTCATAAAACCTACCGCCGCCGGCACCAAAATAGCCTACTCT
TCGGTGGCACTCTTAACGCAACAACTAGCAGTAGGTTCGGCGGCGGCGGC
AGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCTG
CGCCACCTCCATGGTGTCGGGC back to topprotein sequence of jgi.p|Nanoce1779_2|629723 >mRNA_4049-protein ID=mRNA_4049-protein|Name=jgi.p|Nanoce1779_2|629723|organism=Nannochloropsis oceanica|type=polypeptide|length=250bp
MSLCPTDKQGHALVARRNLCQLFEAHPCLQQPRYHKLGLRITLPSTEQSQ
SRSERFESQRSTGTRFRGRRSHGDEEYVFLGDDEKEGCASGSDIDDEEDA
TSSISSGRDSMFYGGSAGSEEGDELQHEQLGESVPGIGSFYVKRDQVLRR
RRRDFVKLKRSQKAKIVKTAYSVIEAVCETFFPGERMELLDAITSAHKTY
RRRHQNSLLFGGTLNATTSSRFGGGGSSSSSSSSSSSSSSSCCATSMVSG back to topmRNA from alignment at scaffold_8:718348..719356- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4049 ID=mRNA_4049|Name=jgi.p|Nanoce1779_2|629723|organism=Nannochloropsis oceanica|type=mRNA|length=1009bp|location=Sequence derived from alignment at scaffold_8:718348..719356- (Nannochloropsis oceanica)
GCAGCATTTCTTTCTGCACACCATGTCGCTCTGCCCAACCGACAAACAAG
GGCACGCCTTGGTTGCCAGGCGCAACCTTTGCCAGCTGTTCGAGGCTCAC
CCCTGTCTGCAGCAGCCGCGATACCATAAATTGGGATTGCGCATCACTCT
TCCTTCTACGGAGCAATCGCAATCACGATCCGAAAGGTTTGAATCTCAGG
TACGATTTCTCGGTTTCTTGCCCTCTTTTGCTCCCCCTGACCTTCCTTCC
CCGGCCCCTCGCCCCTTCATTACCTCCTTCCCTCTTCCCCTTCCAAGAGG
TCAACTGGAACCAGGTTTCGCGGCCGCCGTTCGCACGGCGACGAAGAATA
TGTCTTCCTTGGCGATGATGAGAAGGAGGGGTGTGCTAGCGGCAGCGACA
TAGACGACGAAGAGGACGCCACCAGCAGCATCAGCAGTGGACGGGACTCC
ATGTTCTATGGAGGCAGCGCTGGTAGCGAGGAGGGGGACGAGCTGCAGCA
CGAGCAGCTTGGAGAGAGCGTACCAGGCATCGGTTCATTCTACGTCAAGC
GGGACCAGGTTCTGCGGCGGCGGCGGCGGGACTTCGTGAAGCTCAAGCGG
TCGCAAAAGGTAGGAGGTACGGATGGAGGGCACATTCAAACGAGATTATG
TGCCCATGTCTTCGTCTCTTTCGTTTTCGCCTGCGTCCCCGCAAAATAGC
GAATCGTTCGCTCTATTCATCCTTACCTAATGGTCCTTCCTCTCCTAGGC
CAAAATCGTCAAGACGGCCTATTCCGTGATCGAGGCAGTGTGCGAGACCT
TTTTCCCGGGGGAGCGCATGGAGCTCCTCGACGCAATCACTAGTGCTCAT
AAAACCTACCGCCGCCGGCACCAAAATAGCCTACTCTTCGGTGGCACTCT
TAACGCAACAACTAGCAGTAGGTTCGGCGGCGGCGGCAGCAGCAGCAGCA
GTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCCACCTCCATG
GTGTCGGGC back to topCoding sequence (CDS) from alignment at scaffold_8:718348..719356- >mRNA_4049 ID=mRNA_4049|Name=jgi.p|Nanoce1779_2|629723|organism=Nannochloropsis oceanica|type=CDS|length=2250bp|location=Sequence derived from alignment at scaffold_8:718348..719356- (Nannochloropsis oceanica)
GCCAAAATCGTCAAGACGGCCTATTCCGTGATCGAGGCAGTGTGCGAGAC
CTTTTTCCCGGGGGAGCGCATGGAGCTCCTCGACGCAATCACTAGTGCTC
ATAAAACCTACCGCCGCCGGCACCAAAATAGCCTACTCTTCGGTGGCACT
CTTAACGCAACAACTAGCAGTAGGTTCGGCGGCGGCGGCAGCAGCAGCAG
CAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCCACCTCCA
TGGTGTCGGGCAGGTCAACTGGAACCAGGTTTCGCGGCCGCCGTTCGCAC
GGCGACGAAGAATATGTCTTCCTTGGCGATGATGAGAAGGAGGGGTGTGC
TAGCGGCAGCGACATAGACGACGAAGAGGACGCCACCAGCAGCATCAGCA
GTGGACGGGACTCCATGTTCTATGGAGGCAGCGCTGGTAGCGAGGAGGGG
GACGAGCTGCAGCACGAGCAGCTTGGAGAGAGCGTACCAGGCATCGGTTC
ATTCTACGTCAAGCGGGACCAGGTTCTGCGGCGGCGGCGGCGGGACTTCG
TGAAGCTCAAGCGGTCGCAAAAGATGTCGCTCTGCCCAACCGACAAACAA
GGGCACGCCTTGGTTGCCAGGCGCAACCTTTGCCAGCTGTTCGAGGCTCA
CCCCTGTCTGCAGCAGCCGCGATACCATAAATTGGGATTGCGCATCACTC
TTCCTTCTACGGAGCAATCGCAATCACGATCCGAAAGGTTTGAATCTCAG
GCCAAAATCGTCAAGACGGCCTATTCCGTGATCGAGGCAGTGTGCGAGAC
CTTTTTCCCGGGGGAGCGCATGGAGCTCCTCGACGCAATCACTAGTGCTC
ATAAAACCTACCGCCGCCGGCACCAAAATAGCCTACTCTTCGGTGGCACT
CTTAACGCAACAACTAGCAGTAGGTTCGGCGGCGGCGGCAGCAGCAGCAG
CAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCCACCTCCA
TGGTGTCGGGCAGGTCAACTGGAACCAGGTTTCGCGGCCGCCGTTCGCAC
GGCGACGAAGAATATGTCTTCCTTGGCGATGATGAGAAGGAGGGGTGTGC
TAGCGGCAGCGACATAGACGACGAAGAGGACGCCACCAGCAGCATCAGCA
GTGGACGGGACTCCATGTTCTATGGAGGCAGCGCTGGTAGCGAGGAGGGG
GACGAGCTGCAGCACGAGCAGCTTGGAGAGAGCGTACCAGGCATCGGTTC
ATTCTACGTCAAGCGGGACCAGGTTCTGCGGCGGCGGCGGCGGGACTTCG
TGAAGCTCAAGCGGTCGCAAAAGATGTCGCTCTGCCCAACCGACAAACAA
GGGCACGCCTTGGTTGCCAGGCGCAACCTTTGCCAGCTGTTCGAGGCTCA
CCCCTGTCTGCAGCAGCCGCGATACCATAAATTGGGATTGCGCATCACTC
TTCCTTCTACGGAGCAATCGCAATCACGATCCGAAAGGTTTGAATCTCAG
GCCAAAATCGTCAAGACGGCCTATTCCGTGATCGAGGCAGTGTGCGAGAC
CTTTTTCCCGGGGGAGCGCATGGAGCTCCTCGACGCAATCACTAGTGCTC
ATAAAACCTACCGCCGCCGGCACCAAAATAGCCTACTCTTCGGTGGCACT
CTTAACGCAACAACTAGCAGTAGGTTCGGCGGCGGCGGCAGCAGCAGCAG
CAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCCACCTCCA
TGGTGTCGGGCAGGTCAACTGGAACCAGGTTTCGCGGCCGCCGTTCGCAC
GGCGACGAAGAATATGTCTTCCTTGGCGATGATGAGAAGGAGGGGTGTGC
TAGCGGCAGCGACATAGACGACGAAGAGGACGCCACCAGCAGCATCAGCA
GTGGACGGGACTCCATGTTCTATGGAGGCAGCGCTGGTAGCGAGGAGGGG
GACGAGCTGCAGCACGAGCAGCTTGGAGAGAGCGTACCAGGCATCGGTTC
ATTCTACGTCAAGCGGGACCAGGTTCTGCGGCGGCGGCGGCGGGACTTCG
TGAAGCTCAAGCGGTCGCAAAAGATGTCGCTCTGCCCAACCGACAAACAA
GGGCACGCCTTGGTTGCCAGGCGCAACCTTTGCCAGCTGTTCGAGGCTCA
CCCCTGTCTGCAGCAGCCGCGATACCATAAATTGGGATTGCGCATCACTC
TTCCTTCTACGGAGCAATCGCAATCACGATCCGAAAGGTTTGAATCTCAG back to top
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