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Properties
| Property Name | Value |
|---|
| TranscriptId | 589023 |
| Track | FilteredModels2 |
| ProteinId | 588937 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:456952..458473 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4384 ID=mRNA_4384|Name=jgi.p|Nanoce1779_2|588937|organism=Nannochloropsis oceanica|type=mRNA|length=1522bp
ACAGGTTTTCAATAGCAGTAAGGAGGGCCAGCAACGGGCAGCTGCAACAG
TAGCGGCAGCCGCACGTGACTAGACGCGCAAGGACTTGGACACCACGTGC
CTTGTCTTCGAGCATCACTGGTACGCACCTCTGGTTGACCCCCCTTTAGG
TAGTTTCTCCTACTTGGCGCCCACGCCGTGCTCCCTCAGTCGTCACCATG
TCCGCAGGAGACGATGGACTCGTCTCCTTCTTCTTCTACATCCTCTTCGT
CTACCCCACCACCTCCTGGATCCTCAAACCTGGCCGCTTCCCGAAGAAAA
CTGGTCTGATGTATGCCATAGGCTTCCTGGCCATTCTGGCTCTTGGGAAG
ACCTACCTCGAGTTCCAAGAACGCGGGCCTAACTATTACAACGAGCTAAA
CATCAACCGTGCCTCCAGTCCGTTGGAAATCAAAAAGGCCTATAAGAAGA
TGTCCTTGGAATTACACCCCGACAAGAACAAGAGCCCAAACGCCGCCGAT
ATGTTTGCGCGGGTCAAGGATGCGTATGACACTTTAATGGACCCTGAATT
GAGGGAGGTTTATAATAAATTTGGTCCAGAGGGGATCAAGCATAACCGAC
GCTTCGACGAGACGCAGTTACTCTTGGAGATCGCGGTGTACTACGCGACC
TGGGGTATGTTGGCTTTCGTGTTGACGCTGGGGAAGGCGAGTAGCAGTGC
GCGGAACTGGATCTTCACCGGTCAGATCGTCATGTTGATTGCGGAGATAT
CGTTGATGCTGCAAGAAACGAAGCTCCCGGGATGGTTGTTGCCGGCTTGG
ACGGAGCATGAGTTTGTCTTCTTGATGCATTCTTTGTTCCCGGCTTTCAT
GAATGGATGTCGGTGTCTGGGTGGGTTTCTGTACGTTGATTTTGACGAGC
AGGCAAGGCAGAAAATGGAGCATTTGGATGCGCAAAACAAGGACATATTG
TTGGTGTTGAGAGACATCCAGGTTAACATTCAGTCGATTGCGGTACGTAC
GGCCAGAACGAACATGTGTCTTCGTCTATGATGTGTTTTGGTCTTTATTT
GTGTGATGTGTTTGTGTTGGGTGGAAGTCGCAGAGAGCATGCGGTGTGTC
GTGAACACACGCAGTCAATCGCGGTACGTTCGGGCAGGAGACGAGAGGAT
TAATCCTCTTAGCGTATCGTGTGTTTGGATGTTGTTATGTTGCTTGTCGT
TTCCTCCTTTCTCCCCTCTGTGTGTATGTGATGAGTCTGTGTGCATGAGG
AGCGGTGCGAGAGCGTTTTCTTTATTCGACCCCCCCTCCTTCTCCCCCCC
CTCTTTGGTAATCTATATACAATAGACACGCCGCGCCGCTGCCTTGGCTA
ACCCCTCTTCCTCCTCCTCTTCCTCTTCCTCCACCATTGTACCCACCATC
CCGCCCTCTTCCTCTTCATCCACCACCACCAACAACTCCAACAACAACTA
CAACGACAACAACTACAACGACAGGTCAGCGGCGGCAGCAGCGGGCTCGG
TGGCAGCAGCAGCAGGGGGGCA back to topprotein sequence of jgi.p|Nanoce1779_2|588937 >mRNA_4384-protein ID=mRNA_4384-protein|Name=jgi.p|Nanoce1779_2|588937|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MSAGDDGLVSFFFYILFVYPTTSWILKPGRFPKKTGLMYAIGFLAILALG
KTYLEFQERGPNYYNELNINRASSPLEIKKAYKKMSLELHPDKNKSPNAA
DMFARVKDAYDTLMDPELREVYNKFGPEGIKHNRRFDETQLLLEIAVYYA
TWGMLAFVLTLGKASSSARNWIFTGQIVMLIAEISLMLQETKLPGWLLPA
WTEHEFVFLMHSLFPAFMNGCRCLGGFLYVDFDEQARQKMEHLDAQNKDI
LLVLRDIQVNIQSIAVRTARTNMCLRL* back to topmRNA from alignment at scaffold_10:456952..458473- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4384 ID=mRNA_4384|Name=jgi.p|Nanoce1779_2|588937|organism=Nannochloropsis oceanica|type=mRNA|length=1522bp|location=Sequence derived from alignment at scaffold_10:456952..458473- (Nannochloropsis oceanica)
ACAGGTTTTCAATAGCAGTAAGGAGGGCCAGCAACGGGCAGCTGCAACAG
TAGCGGCAGCCGCACGTGACTAGACGCGCAAGGACTTGGACACCACGTGC
CTTGTCTTCGAGCATCACTGGTACGCACCTCTGGTTGACCCCCCTTTAGG
TAGTTTCTCCTACTTGGCGCCCACGCCGTGCTCCCTCAGTCGTCACCATG
TCCGCAGGAGACGATGGACTCGTCTCCTTCTTCTTCTACATCCTCTTCGT
CTACCCCACCACCTCCTGGATCCTCAAACCTGGCCGCTTCCCGAAGAAAA
CTGGTCTGATGTATGCCATAGGCTTCCTGGCCATTCTGGCTCTTGGGAAG
ACCTACCTCGAGTTCCAAGAACGCGGGCCTAACTATTACAACGAGCTAAA
CATCAACCGTGCCTCCAGTCCGTTGGAAATCAAAAAGGCCTATAAGAAGA
TGTCCTTGGAATTACACCCCGACAAGAACAAGAGCCCAAACGCCGCCGAT
ATGTTTGCGCGGGTCAAGGATGCGTATGACACTTTAATGGACCCTGAATT
GAGGGAGGTTTATAATAAATTTGGTCCAGAGGGGATCAAGCATAACCGAC
GCTTCGACGAGACGCAGTTACTCTTGGAGATCGCGGTGTACTACGCGACC
TGGGGTATGTTGGCTTTCGTGTTGACGCTGGGGAAGGCGAGTAGCAGTGC
GCGGAACTGGATCTTCACCGGTCAGATCGTCATGTTGATTGCGGAGATAT
CGTTGATGCTGCAAGAAACGAAGCTCCCGGGATGGTTGTTGCCGGCTTGG
ACGGAGCATGAGTTTGTCTTCTTGATGCATTCTTTGTTCCCGGCTTTCAT
GAATGGATGTCGGTGTCTGGGTGGGTTTCTGTACGTTGATTTTGACGAGC
AGGCAAGGCAGAAAATGGAGCATTTGGATGCGCAAAACAAGGACATATTG
TTGGTGTTGAGAGACATCCAGGTTAACATTCAGTCGATTGCGGTACGTAC
GGCCAGAACGAACATGTGTCTTCGTCTATGATGTGTTTTGGTCTTTATTT
GTGTGATGTGTTTGTGTTGGGTGGAAGTCGCAGAGAGCATGCGGTGTGTC
GTGAACACACGCAGTCAATCGCGGTACGTTCGGGCAGGAGACGAGAGGAT
TAATCCTCTTAGCGTATCGTGTGTTTGGATGTTGTTATGTTGCTTGTCGT
TTCCTCCTTTCTCCCCTCTGTGTGTATGTGATGAGTCTGTGTGCATGAGG
AGCGGTGCGAGAGCGTTTTCTTTATTCGACCCCCCCTCCTTCTCCCCCCC
CTCTTTGGTAATCTATATACAATAGACACGCCGCGCCGCTGCCTTGGCTA
ACCCCTCTTCCTCCTCCTCTTCCTCTTCCTCCACCATTGTACCCACCATC
CCGCCCTCTTCCTCTTCATCCACCACCACCAACAACTCCAACAACAACTA
CAACGACAACAACTACAACGACAGGTCAGCGGCGGCAGCAGCGGGCTCGG
TGGCAGCAGCAGCAGGGGGGCA back to topCoding sequence (CDS) from alignment at scaffold_10:456952..458473- >mRNA_4384 ID=mRNA_4384|Name=jgi.p|Nanoce1779_2|588937|organism=Nannochloropsis oceanica|type=CDS|length=834bp|location=Sequence derived from alignment at scaffold_10:456952..458473- (Nannochloropsis oceanica)
ATGTCCGCAGGAGACGATGGACTCGTCTCCTTCTTCTTCTACATCCTCTT
CGTCTACCCCACCACCTCCTGGATCCTCAAACCTGGCCGCTTCCCGAAGA
AAACTGGTCTGATGTATGCCATAGGCTTCCTGGCCATTCTGGCTCTTGGG
AAGACCTACCTCGAGTTCCAAGAACGCGGGCCTAACTATTACAACGAGCT
AAACATCAACCGTGCCTCCAGTCCGTTGGAAATCAAAAAGGCCTATAAGA
AGATGTCCTTGGAATTACACCCCGACAAGAACAAGAGCCCAAACGCCGCC
GATATGTTTGCGCGGGTCAAGGATGCGTATGACACTTTAATGGACCCTGA
ATTGAGGGAGGTTTATAATAAATTTGGTCCAGAGGGGATCAAGCATAACC
GACGCTTCGACGAGACGCAGTTACTCTTGGAGATCGCGGTGTACTACGCG
ACCTGGGGTATGTTGGCTTTCGTGTTGACGCTGGGGAAGGCGAGTAGCAG
TGCGCGGAACTGGATCTTCACCGGTCAGATCGTCATGTTGATTGCGGAGA
TATCGTTGATGCTGCAAGAAACGAAGCTCCCGGGATGGTTGTTGCCGGCT
TGGACGGAGCATGAGTTTGTCTTCTTGATGCATTCTTTGTTCCCGGCTTT
CATGAATGGATGTCGGTGTCTGGGTGGGTTTCTGTACGTTGATTTTGACG
AGCAGGCAAGGCAGAAAATGGAGCATTTGGATGCGCAAAACAAGGACATA
TTGTTGGTGTTGAGAGACATCCAGGTTAACATTCAGTCGATTGCGGTACG
TACGGCCAGAACGAACATGTGTCTTCGTCTATGA back to top
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