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Properties
| Property Name | Value |
|---|
| TranscriptId | 670732 |
| Track | FilteredModels2 |
| ProteinId | 670646 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:67672..69677 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4231 ID=mRNA_4231|Name=jgi.p|Nanoce1779_2|670646|organism=Nannochloropsis oceanica|type=mRNA|length=1891bp
ACAGGCGGGACAGTGTTTGTTGGCCAGAGAGACTTTGAGCGACTTCGGCT
TCATCACCAACCAGCGTCTTCCCTCCTGCCTCCCTCCTTCTCCTTCCATC
ACACAAGACCACTACGGACAAGCACGAGGCAATGCCGCCTCACTGAGGCA
TACACTTCTCGACAATCAGGACTTATGGGCAGCATCACGCAGATAAGCTC
GCGCCAGGACTTGAAGGACTTTCTGGCCGCCAAGCCCAAGGCCATCCTTG
GCTTTTATGCCTCCTGGCTCCGCGGGTCCTCCTCTGTCGTGGAGAGCGTG
CTCCTCGCGACAAGCACCGCAGCAGCTGCCCCAGGGACGACGGCGACAAT
GGCCGGGAATGTGGGTGAGGCCAGCGTTAGAACGATGGGTTGGCATGCTG
AATTGGAAGTAGGGAGCTTGGACGTGGGGCTATGGGAGGACCTGGCGTTC
GAGGCGGAGGTTGGAAGTGCCTTGCCGTGCTTCAATTTCTATCGCGACGG
TCGCCTTGTAGGAGGGGTGAAGGCAGGCGATGGGGAAGCTGACATGGATG
ATAGGAATGGAGGAGGGAATGGCCGTAGAAGACATCACAATGGAAATGGA
GGAAGTCCGAAATACAGCCCATCAGATGTTCTATTGAATGCCTGCCTCTG
CTTCGTCACTTCCATGGACCAAGACGACGACGAGGTCAACAACAACGCCA
TCGCCCTCCCTCCCTCTCCCCCACCTTTCCATCTCATCAAGGCCATCCCT
ACCGGTGAGCCTCTCCTCCTCTTCATCGCCGGCGACCGTTCCAAGGTCGG
CAAGTCGTCCATGTGCCTTGCCCTGCTTGGGGCCCTCCTCCGCTTGGGCT
TCCACCCGTCCCAACTCGCCTACATCAAGCCCGCCACACAATGCGAAGCC
CCCCAGCTCGTCACCGCCTGGTGTGACTCTGTCGGGATCAGCAACCGCGG
CGTGGGTCCAGTCGTCTTCTACAAGGGATTCACCCGAGAATTCCTTAAGG
GCAACCTGGGCACCTCCACGGATCTCGTTCACGAGGCCTGTGCCGGGGTC
CACGCCATCGGAAAGGACAAAAAAATCGTCCTTGTTGATGGAGTGGGCTA
CCCGGCGGTGGGATCCATCTGTGGGGTCAGTAATGCCGACATTGCGCTGG
CCCTGGGGGGCTGCTCCGTGGTGCTGGTAGGGAGGGCAGGGGTTGGCGAT
GCGGTGGACTCGTTTAACTTGAATGCCACTTTTTTTAAGTATAGGGGGGT
ACGGGTCTTAGGCGCGATATTCAATCGTCTGCCAAAGGAGGGCTTCTATT
CACTTGAGGCGTGTAGAGAGGCGGTGGGAGGGTACTTTGAGCAGTACCAG
GGGGGAGGGAGGGAGGGAGGGCTGGGGGGTTGGAGGGAGGGGAGTAAGGC
TTACGGCTTTGTGCCTGAGGTGGAGAATCTGGGGAGATTGTTGGTTGAGA
CGTTTCAGCAGCATGTGGACCTCAAGGGAATCTTAAACGATGCCTGGAAG
TACAGAGAAGGTTGGAGGGCCCAGCAGCTGCTGCAGCTGCAGCTGCAGCA
GCAGCAGCGGTTACCGGTGGGAGGAGGAGAAGCAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGGGGAGAAGTGTAGCACCG
GTGCCGGGCCTGGTGGCCCAAGCGTCAAGACCGGCAGCAGTAGCAGTAGT
AGCAGCAGCCCCTGCAGCTCCAGCAGCGGTCGAAGGAGGGGGAGGGGGAG
GGGCTGGGGTGTGCGCATATGTCCCAGGGCGGAAGCGGAAGAGTAGGGAG
GAGATTGAGCAAGCGGCGAAAAAGCAGGGGGCCAAGGGGGGCTGAGGATC
GTAATCCCTCGAAAGCACAGGGGTCACTGGAGGAGGGAAGG back to topprotein sequence of jgi.p|Nanoce1779_2|670646 >mRNA_4231-protein ID=mRNA_4231-protein|Name=jgi.p|Nanoce1779_2|670646|organism=Nannochloropsis oceanica|type=polypeptide|length=557bp
MGSITQISSRQDLKDFLAAKPKAILGFYASWLRGSSSVVESVLLATSTAA
AAPGTTATMAGNVGEASVRTMGWHAELEVGSLDVGLWEDLAFEAEVGSAL
PCFNFYRDGRLVGGVKAGDGEADMDDRNGGGNGRRRHHNGNGGSPKYSPS
DVLLNACLCFVTSMDQDDDEVNNNAIALPPSPPPFHLIKAIPTGEPLLLF
IAGDRSKVGKSSMCLALLGALLRLGFHPSQLAYIKPATQCEAPQLVTAWC
DSVGISNRGVGPVVFYKGFTREFLKGNLGTSTDLVHEACAGVHAIGKDKK
IVLVDGVGYPAVGSICGVSNADIALALGGCSVVLVGRAGVGDAVDSFNLN
ATFFKYRGVRVLGAIFNRLPKEGFYSLEACREAVGGYFEQYQGGGREGGL
GGWREGSKAYGFVPEVENLGRLLVETFQQHVDLKGILNDAWKYREGWRAQ
QLLQLQLQQQQRLPVGGGEAGGGGGGGGGGGGRGGGGRSVAPVPGLVAQA
SRPAAVAVVAAAPAAPAAVEGGGGGGAGVCAYVPGRKRKSREEIEQAAKK
QGAKGG* back to topmRNA from alignment at scaffold_10:67672..69677- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4231 ID=mRNA_4231|Name=jgi.p|Nanoce1779_2|670646|organism=Nannochloropsis oceanica|type=mRNA|length=2006bp|location=Sequence derived from alignment at scaffold_10:67672..69677- (Nannochloropsis oceanica)
ACAGGCGGGACAGTGTTTGTTGGCCAGAGAGACTTTGAGCGACTTCGGCT
TCATCACCAACCAGCGTCTTCCCTCCTGCCTCCCTCCTTCTCCTTCCATC
ACACAAGACCACTACGGACAAGCACGAGGCAATGCCGCCTCACTGAGGCA
TACACTTCTCGACAATCAGGACTTATGGGCAGCATCACGCAGATAAGCTC
GCGCCAGGACTTGAAGGACTTTCTGGCCGCCAAGCCCAAGGCCATCCTTG
GCTTTTATGCCTCCTGGCTCCGCGGGTCCTCCTCTGTCGTGGAGAGCGTG
CTCCTCGCGACAAGCACCGCAGCAGCTGCCCCAGGGACGACGGCGACAAT
GGCCGGGAATGTGGGTGAGGCCAGCGTTAGAACGATGGGTTGGCATGCTG
AATTGGAAGTAGGGAGCTTGGACGTGGGGCTATGGGAGGACCTGGCGTTC
GAGGCGGAGGTTGGAAGTGCCTTGCCGTGCTTCAATTTCTATCGCGACGG
TCGCCTTGTAGGAGGGGTGAAGGCAGGCGATGGGGAAGCTGACATGGATG
ATAGGAATGGAGGAGGGAATGGCCGTAGAAGACATCACAATGGAAATGGA
GGAAGTCCGAAATACAGCCCATCAGATGTTCTATTGAATGCCTGCCTCTG
CTTCGTCACTTCCATGGACCAAGACGACGACGAGGTCAACAACAACGCCA
TCGCCCTCCCTCCCTCTCCCCCACCTTTCCATCTCATCAAGGCCATCCCT
ACCGGTGAGCCTCTCCTCCTCTTCATCGCCGGCGACCGTTCCAAGGTCGG
CAAGTCGTCCATGTGCCTTGCCCTGCTTGGGGCCCTCCTCCGCTTGGGCT
TCCACCCGTCCCAACTCGCCTACATCAAGCCCGCCACACAATGCGAAGCC
CCCCAGCTCGTCACCGCCTGGTGTGACTCTGTCGGGATCAGCAACCGCGG
CGTGGGTCCAGTCGTCTTCTACAAGGGATTCACCCGAGAATTCCTTAAGG
GCAACCTGGGCACCTCCACGGATCTCGTTCACGAGGCCTGTGCCGGGGTC
CACGCCATCGGAAAGGACAAAAAAATCGTCCTTGTTGATGGAGTGGGCTA
CCCGGCGGTGGGATCCATCTGTGGGGTCAGTAATGCCGACATTGCGCTGG
CCCTGGGGGGCTGCTCCGTGGTGCTGGTAGGGAGGGCAGGGGTTGGCGAT
GCGGTGGACTCGTTTAACTTGAATGCCACTTTTTTTAAGTATAGGGGGGT
ACGGGTCTTAGGCGCGATATTCAATCGTCTGCCAAAGGAGGGCTTCTATT
CACTTGAGGCGTGTAGAGAGGCGGTGGGAGGGTACTTTGAGCAGTACCAG
GGGGGAGGGAGGGAGGGAGGGCTGGGGGGTTGGAGGGAGGGGAGTAAGGC
TTACGGCTTTGTGCCTGAGGTGGAGAATCTGGGGAGAGTGAGGGAGGAGA
TGGAGGAGGAGCATGCGGCGGCTGCTGCTGCTGCTGCCGGGGAGGGGGGG
GGGGGGGGGGGAGGGAGGGAGGGTGGAAGAGCGGAGGATGCGGATGGTGG
AGTTGTTGGTTGAGACGTTTCAGCAGCATGTGGACCTCAAGGGAATCTTA
AACGATGCCTGGAAGTACAGAGAAGGTTGGAGGGCCCAGCAGCTGCTGCA
GCTGCAGCTGCAGCAGCAGCAGCGGTTACCGGTGGGAGGAGGAGAAGCAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGGGG
AGAAGTGTAGCACCGGTGCCGGGCCTGGTGGCCCAAGCGTCAAGACCGGC
AGCAGTAGCAGTAGTAGCAGCAGCCCCTGCAGCTCCAGCAGCGGTCGAAG
GAGGGGGAGGGGGAGGGGCTGGGGTGTGCGCATATGTCCCAGGGCGGAAG
CGGAAGAGTAGGGAGGAGATTGAGCAAGCGGCGAAAAAGCAGGGGGCCAA
GGGGGGCTGAGGATCGTAATCCCTCGAAAGCACAGGGGTCACTGGAGGAG
GGAAGG back to topCoding sequence (CDS) from alignment at scaffold_10:67672..69677- >mRNA_4231 ID=mRNA_4231|Name=jgi.p|Nanoce1779_2|670646|organism=Nannochloropsis oceanica|type=CDS|length=3342bp|location=Sequence derived from alignment at scaffold_10:67672..69677- (Nannochloropsis oceanica)
TTGTTGGTTGAGACGTTTCAGCAGCATGTGGACCTCAAGGGAATCTTAAA
CGATGCCTGGAAGTACAGAGAAGGTTGGAGGGCCCAGCAGCTGCTGCAGC
TGCAGCTGCAGCAGCAGCAGCGGTTACCGGTGGGAGGAGGAGAAGCAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGGGGAG
AAGTGTAGCACCGGTGCCGGGCCTGGTGGCCCAAGCGTCAAGACCGGCAG
CAGTAGCAGTAGTAGCAGCAGCCCCTGCAGCTCCAGCAGCGGTCGAAGGA
GGGGGAGGGGGAGGGGCTGGGGTGTGCGCATATGTCCCAGGGCGGAAGCG
GAAGAGTAGGGAGGAGATTGAGCAAGCGGCGAAAAAGCAGGGGGCCAAGG
GGGGCTGAATGGGCAGCATCACGCAGATAAGCTCGCGCCAGGACTTGAAG
GACTTTCTGGCCGCCAAGCCCAAGGCCATCCTTGGCTTTTATGCCTCCTG
GCTCCGCGGGTCCTCCTCTGTCGTGGAGAGCGTGCTCCTCGCGACAAGCA
CCGCAGCAGCTGCCCCAGGGACGACGGCGACAATGGCCGGGAATGTGGGT
GAGGCCAGCGTTAGAACGATGGGTTGGCATGCTGAATTGGAAGTAGGGAG
CTTGGACGTGGGGCTATGGGAGGACCTGGCGTTCGAGGCGGAGGTTGGAA
GTGCCTTGCCGTGCTTCAATTTCTATCGCGACGGTCGCCTTGTAGGAGGG
GTGAAGGCAGGCGATGGGGAAGCTGACATGGATGATAGGAATGGAGGAGG
GAATGGCCGTAGAAGACATCACAATGGAAATGGAGGAAGTCCGAAATACA
GCCCATCAGATGTTCTATTGAATGCCTGCCTCTGCTTCGTCACTTCCATG
GACCAAGACGACGACGAGGTCAACAACAACGCCATCGCCCTCCCTCCCTC
TCCCCCACCTTTCCATCTCATCAAGGCCATCCCTACCGGTGAGCCTCTCC
TCCTCTTCATCGCCGGCGACCGTTCCAAGGTCGGCAAGTCGTCCATGTGC
CTTGCCCTGCTTGGGGCCCTCCTCCGCTTGGGCTTCCACCCGTCCCAACT
CGCCTACATCAAGCCCGCCACACAATGCGAAGCCCCCCAGCTCGTCACCG
CCTGGTGTGACTCTGTCGGGATCAGCAACCGCGGCGTGGGTCCAGTCGTC
TTCTACAAGGGATTCACCCGAGAATTCCTTAAGGGCAACCTGGGCACCTC
CACGGATCTCGTTCACGAGGCCTGTGCCGGGGTCCACGCCATCGGAAAGG
ACAAAAAAATCGTCCTTGTTGATGGAGTGGGCTACCCGGCGGTGGGATCC
ATCTGTGGGGTCAGTAATGCCGACATTGCGCTGGCCCTGGGGGGCTGCTC
CGTGGTGCTGGTAGGGAGGGCAGGGGTTGGCGATGCGGTGGACTCGTTTA
ACTTGAATGCCACTTTTTTTAAGTATAGGGGGGTACGGGTCTTAGGCGCG
ATATTCAATCGTCTGCCAAAGGAGGGCTTCTATTCACTTGAGGCGTGTAG
AGAGGCGGTGGGAGGGTACTTTGAGCAGTACCAGGGGGGAGGGAGGGAGG
GAGGGCTGGGGGGTTGGAGGGAGGGGAGTAAGGCTTACGGCTTTGTGCCT
GAGGTGGAGAATCTGGGGAGATTGTTGGTTGAGACGTTTCAGCAGCATGT
GGACCTCAAGGGAATCTTAAACGATGCCTGGAAGTACAGAGAAGGTTGGA
GGGCCCAGCAGCTGCTGCAGCTGCAGCTGCAGCAGCAGCAGCGGTTACCG
GTGGGAGGAGGAGAAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAAGAGGAGGAGGGGGGAGAAGTGTAGCACCGGTGCCGGGCCTGGTGG
CCCAAGCGTCAAGACCGGCAGCAGTAGCAGTAGTAGCAGCAGCCCCTGCA
GCTCCAGCAGCGGTCGAAGGAGGGGGAGGGGGAGGGGCTGGGGTGTGCGC
ATATGTCCCAGGGCGGAAGCGGAAGAGTAGGGAGGAGATTGAGCAAGCGG
CGAAAAAGCAGGGGGCCAAGGGGGGCTGAATGGGCAGCATCACGCAGATA
AGCTCGCGCCAGGACTTGAAGGACTTTCTGGCCGCCAAGCCCAAGGCCAT
CCTTGGCTTTTATGCCTCCTGGCTCCGCGGGTCCTCCTCTGTCGTGGAGA
GCGTGCTCCTCGCGACAAGCACCGCAGCAGCTGCCCCAGGGACGACGGCG
ACAATGGCCGGGAATGTGGGTGAGGCCAGCGTTAGAACGATGGGTTGGCA
TGCTGAATTGGAAGTAGGGAGCTTGGACGTGGGGCTATGGGAGGACCTGG
CGTTCGAGGCGGAGGTTGGAAGTGCCTTGCCGTGCTTCAATTTCTATCGC
GACGGTCGCCTTGTAGGAGGGGTGAAGGCAGGCGATGGGGAAGCTGACAT
GGATGATAGGAATGGAGGAGGGAATGGCCGTAGAAGACATCACAATGGAA
ATGGAGGAAGTCCGAAATACAGCCCATCAGATGTTCTATTGAATGCCTGC
CTCTGCTTCGTCACTTCCATGGACCAAGACGACGACGAGGTCAACAACAA
CGCCATCGCCCTCCCTCCCTCTCCCCCACCTTTCCATCTCATCAAGGCCA
TCCCTACCGGTGAGCCTCTCCTCCTCTTCATCGCCGGCGACCGTTCCAAG
GTCGGCAAGTCGTCCATGTGCCTTGCCCTGCTTGGGGCCCTCCTCCGCTT
GGGCTTCCACCCGTCCCAACTCGCCTACATCAAGCCCGCCACACAATGCG
AAGCCCCCCAGCTCGTCACCGCCTGGTGTGACTCTGTCGGGATCAGCAAC
CGCGGCGTGGGTCCAGTCGTCTTCTACAAGGGATTCACCCGAGAATTCCT
TAAGGGCAACCTGGGCACCTCCACGGATCTCGTTCACGAGGCCTGTGCCG
GGGTCCACGCCATCGGAAAGGACAAAAAAATCGTCCTTGTTGATGGAGTG
GGCTACCCGGCGGTGGGATCCATCTGTGGGGTCAGTAATGCCGACATTGC
GCTGGCCCTGGGGGGCTGCTCCGTGGTGCTGGTAGGGAGGGCAGGGGTTG
GCGATGCGGTGGACTCGTTTAACTTGAATGCCACTTTTTTTAAGTATAGG
GGGGTACGGGTCTTAGGCGCGATATTCAATCGTCTGCCAAAGGAGGGCTT
CTATTCACTTGAGGCGTGTAGAGAGGCGGTGGGAGGGTACTTTGAGCAGT
ACCAGGGGGGAGGGAGGGAGGGAGGGCTGGGGGGTTGGAGGGAGGGGAGT
AAGGCTTACGGCTTTGTGCCTGAGGTGGAGAATCTGGGGAGA back to top
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