jgi.p|Nanoce1779_2|39616, gene_5870 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|39616
Unique Namegene_5870
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:790614..797159 +

Link to JBrowse

Properties
Property NameValue
TranscriptId39702
ProteinId39616
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:790614..797159 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02910NO14G02910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|39616mRNA_5870-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|39616mRNA_5870Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|39616

>mRNA_5870-protein ID=mRNA_5870-protein|Name=jgi.p|Nanoce1779_2|39616|organism=Nannochloropsis oceanica|type=polypeptide|length=1990bp
MKEILVKYKGLQERMKQQQQQQPNQQHQGGGGGEEGEGATSASIPSSLST
STETSETDKESLLLQKLKDLMGRYKELQLVAKTLQAQISVQEQEHQTQKQ
QYASLMEENATLRQEQQDLSQAHERLSERLSTLHQENISLEETQRDLMQA
LDGKSQVLASAEAERKKLQTQVMGTEKGMKEGEEAMVLLKAQLEGLRAAV
VEGDKVKEELERRVREEGNEGTKQGGKEMQKEIEKLKKQVMALEEALAAE
RQAASENEASAAADAAAANKELQAHLQALKKEKGVLSQSLAEAQAAAAAL
ANTKEEQKVETVNNAAAAAAAAAAAQEDLHALQKERDSLTSSLAEAHAAT
TAALALAKEEQELEVSKSQGVIADLEDTLATMTRGKDEAIASLQQDLEGM
RAHLAEAAVATAAVAAAERKQDEAKKEEELEQQARIKGLEEEVEKVRREV
VDLGEEKGKLEALLDGMTTKLMATIAEKEGLESLTKEGEEGKEGLMAALA
AAKEEVEVAMRQKQEAEEEAMQLKEQVQGLEEEGQEARARLQQAQQAADA
AVSAAVTEAEETWKGKYGEERQEAAGKLKEIQVACVALEEEKARLMAGLA
TVEAGWEEEKLKLRGVEEERDAAIAARAEVEEEKTALEMAVATAETGWEE
AKGRLQGVEGERDATATALGKVEEEKAALEAALADAKKSRREVQELLQEA
ERARDAATTACGLTEGENEGLRVRFQAAEEQLRRLEEERDEAATAHVRQE
EEKAALLAQAKLMAEQLQGVEEEKALLRREVDASRSETQASISSSLSIEE
ALREAQGEVIRLEGTLAQATTAHGAAMEELREEMARVAKEDSVAARETAA
AAEKEVKKSQEELAHARRALEAAEEEKNEAGRVAAAAAAEAAAVAEAAAA
AEEEAAAAAGESRGEIERLKKALANAAAALEAAVEEKVKLMQDAEKEVEE
KAVAAAEAAAADSDGVREKLETKLSSMKEEITSLSGQVERLNEEKMKLQQ
LLNDAQQAAAATTTATAASAGLMDLETVVARLKEEKEMLIKEHATAFEQQ
QQQQQQQRGIVSAARREGGEEKEEERQALEEELREVREAMLTLEKEGKEG
KEAWKEERRRMEEAKEEAVAALAAATSEMEEEKKRWQENMAALAAALTEK
EKELTAVLEAAAAAAASATAEETKEESEKEQGTEGDIAEVQAALAAKTQE
NETLVGRMKDLMNKFRELQTQARALREQLVGTEQEKEEVQRRLLAESDAK
EEALGRVRELQAKIAENDIGAAQTERAKQDRILYLESELQLAKTQVASYE
EVVQKLEDEKMTMEEAENEVRRALSSRRQEVELLQEQVVALQRQVAFNPP
PPPSSSVKVEMRVRGGGRVWCLVRYSARGEREGGKAGGKDEEEKEEAKEP
DSVLEWRPEEDVLAWSASSSPFPPSPSSLSLPLILQDRHLEELSHVALKH
AQILENVQQGHAKALQALQDDVEKRTAAFDLYRARAHTALKKNASEQKSQ
EERLEGMRTRVGEVEGRLAEMEKERKRGMEELKEAREEAEDRVQAAKTEA
AEWEIRMKQREEAWREETEGWEGRWENERKEREEERVKLEGLLNDKMDAM
VLLQGEVEKGRKEGKAKGDLARKLLEEKDKEIDALHRTLEQLQQQQQQQQ
QQQQQQQQQQQQYDKHLSHHQQQQQYDKHLSHQQQQQQPASSYARRRDNG
GEESKLEEEEGNVNALLSSSSSSSSLRPPPSPSPSFDNSHSAVSTEQQIV
LAARHQAQRDDEVCRLKHKLRALGETLRGHEQILRQYQHNMAEKDKEVEA
FREAAGRERELSDGGGKEAQDRLTYLKNVIYRYLRSPPDAASERAALVPV
ICTILRFSTTESLEVQQAVAAAAAAAALPTAIGEGVGYLSSLLWGGGVGG
AGGGATSHAHPHVITPGRRRIADGGNVPSGGGMRLASTSASVMAPSGGGG
REGGSQHDAVVRNPMQEEVQGRTEGETAREEVAEESQDL*
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Synonyms
Publications