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Properties
Property Name | Value |
TranscriptId | 530083 |
Track | FilteredModels2 |
ProteinId | 529997 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_14 | supercontig | scaffold_14:548894..550801 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6114 ID=mRNA_6114|Name=jgi.p|Nanoce1779_2|529997|organism=Nannochloropsis oceanica|type=mRNA|length=1761bp ATGACACGACCAAAAAAACGAGGAAGCCTGTCCAAAGCCGACCCCGAACA TGACCTCCTTCTGCTCCTCCGCCTGCTCTATGGCCTTAACCGTCACCTCG CCTCGCTCCTTAACCCAATCTTCTCCTCCTGCTCCCTCATTTCCTCCTCA TCCTCTTCCTCCTCCTCAACAGCAGCGGAAGCAGCAGCATCACAAGCAGA AGTGCAAAGACTGGTGGCACGAGGAGGGCTGAGAGAGGAAGACTGGATAA ATAAACCGCTAAGTGAATGCATGGCACAGGAGCTGCAGGACCCTCTTGCC CTCGCCACGCAGCAGCTCCCCGGGTGGTGTGACCAGCTATTAACCTCCTG TCCATTTCTCCTCCCTTTCCTCGTGCGGAAGGAATATTTTTACCTGTCTT CTTTTGGGTTAGGAAGGGCAGTGCATCGGTTGTTGCTACAGCACCAGAAG CGTGGAGGAGGGGGGGGAAGAGGAGGAGGGGATGCAAGTGGTGGCGGCAG AGGAGCAGGAGGAGGAGGGAACGCACTGCAGCAGCTTAAGGTGCGGATTT CGCGTCACAAGTTGTTGGCGTCAGCAGAAAAAATTTTGGCAGAGTATGGA CGTAAAAGGGTGATGCTTGAAACTGAATTTCAAAATGAGCCGGGCACGGG TTCAGGGCCGACGGCCGAGTTTTTTTCGTTGGTTTCAAAGGAGCTACAGG ACCCGAGGTTGGGATTGTGGAGAGGGGGGGGTCAGGGTCTGCGCGAAGGG GGGCTCTACCCGCAGCCGTGGGGAGGAGGGGAAGAGGGGGAGAGGGAGAA GGTGTTGAGGCGATTTATGTGTCTAGGCCGGTTGGTGGGGCAGGCGCTCT TGGATGAACGAATGCTCGATTTTCGGTTTGCGGCCCCATTGGTGGGAGCT TTGGCGGGAGAAATGCCGTGTCAGTCCTTGCCGGCAGCACTTCAGGAAAT GGGAACCGTGGACCCAGGTCTGGCAAGACAGCTGCAGGCGCTGATTGGGA GTTGTGGGGTGGCTCCTTGGTGGGTGGAGGGAGGTGGGGATGGAAGGGAG GAGGATAGGAAGGAGGAGAGGGGGGATGAGGTGGCGGATTTGTGTCTGAC TTTTTGTTTGCCGGGACATCCGTCGATTGGACTGACGTCCTCTTCAAGAA ATTTCATAACAGCAGTGGCATCAGACCAAGAAAATGACGAAGAAGACGTG ACTAGCACCAACCTCCCCCTCTACATTCAGCGCGTCCTCCAAGCCAGCCT CACCGAAACTGTCTCCCCACAAATCACCTCCCTCCTCGCCGGACTTTCGG ACGTGCTCATGCCGGCTTCCCTGAGGATTTTTACGAGAGAGGAAATTATG GCAATGATTGCGGGCGTGGGATCAGAAATGGGTGAGGATCCAGAGGAAAT CCTCGAGGCCATATCATGTGATCATGGGTACACGCGAGGGAGTCAGGCGG TGAGGTGGTTGGTCGAGATTTTGGCGGAGATGGAAGGAAAGGAACAGAGA CAATTTTTGATGTTCGTGACGGGGAGCCCCGGGCTGCCTGTAGGGGGGCT GATGGGGTGCCTGCCGAGGCTGACGGTAGTGAAGAAGGTGGCCGAGGGGC ATTTGAGGGCGGAGGGGCAGGGAGGAGTGGATAAGATGTTGCCGAGTGCG TCGACGTGCACGAATTATTTGAAATTGCCCGATTACTCGAGTAAGACTGT TATGAGGGAAAGGTTGCTGCTCAGTTTGAGTTATGGGCAGCATTCCTTTT ACTTGTCCTAG back to topprotein sequence of jgi.p|Nanoce1779_2|529997 >mRNA_6114-protein ID=mRNA_6114-protein|Name=jgi.p|Nanoce1779_2|529997|organism=Nannochloropsis oceanica|type=polypeptide|length=587bp MTRPKKRGSLSKADPEHDLLLLLRLLYGLNRHLASLLNPIFSSCSLISSS SSSSSSTAAEAAASQAEVQRLVARGGLREEDWINKPLSECMAQELQDPLA LATQQLPGWCDQLLTSCPFLLPFLVRKEYFYLSSFGLGRAVHRLLLQHQK RGGGGGRGGGDASGGGRGAGGGGNALQQLKVRISRHKLLASAEKILAEYG RKRVMLETEFQNEPGTGSGPTAEFFSLVSKELQDPRLGLWRGGGQGLREG GLYPQPWGGGEEGEREKVLRRFMCLGRLVGQALLDERMLDFRFAAPLVGA LAGEMPCQSLPAALQEMGTVDPGLARQLQALIGSCGVAPWWVEGGGDGRE EDRKEERGDEVADLCLTFCLPGHPSIGLTSSSRNFITAVASDQENDEEDV TSTNLPLYIQRVLQASLTETVSPQITSLLAGLSDVLMPASLRIFTREEIM AMIAGVGSEMGEDPEEILEAISCDHGYTRGSQAVRWLVEILAEMEGKEQR QFLMFVTGSPGLPVGGLMGCLPRLTVVKKVAEGHLRAEGQGGVDKMLPSA STCTNYLKLPDYSSKTVMRERLLLSLSYGQHSFYLS* back to topmRNA from alignment at scaffold_14:548894..550801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6114 ID=mRNA_6114|Name=jgi.p|Nanoce1779_2|529997|organism=Nannochloropsis oceanica|type=mRNA|length=1908bp|location=Sequence derived from alignment at scaffold_14:548894..550801+ (Nannochloropsis oceanica) ATGACACGACCAAAAAAACGAGGAAGCCTGTCCAAAGCCGACCCCGAACA
TGACCTCCTTCTGCTCCTCCGCCTGCTCTATGGCCTTAACCGTCACCTCG
CCTCGCTCCTTAACCCAATCTTCTCCTCCTGCTCCCTCATTTCCTCCTCA
TCCTCTTCCTCCTCCTCAACAGCAGCGGAAGCAGCAGCATCACAAGCAGA
AGTGCAAAGACTGGTGGCACGAGGAGGGCTGAGAGAGGAAGACTGGATAA
ATAAACCGCTAAGTGAATGCATGGCACAGGAGCTGCAGGACCCTCTTGCC
CTCGCCACGCAGCAGCTCCCCGGGTGGTGTGACCAGCTATTAACCTCCTG
TCCATTTCTCCTCCCTTTCCTCGTGCGGAAGGAATATTTTTACCTGTCTT
CTTTTGGGTTAGGAAGGGCAGTGCATCGGTTGTTGCTACAGCACCAGAAG
CGTGGAGGAGGGGGGGGAAGAGGAGGAGGGGATGCAAGTGGTGGCGGCAG
AGGAGCAGGAGGAGGAGGGAACGGTATAGGGCGGCATGGTTCTCACCATT
ACTCCCAGCAACAGCAGCAGCAACGAGTGCCTGCTACAGCACTGCAGCAG
CTTAAGGTGCGGATTTCGCGTCACAAGTTGTTGGCGTCAGCAGAAAAAAT
TTTGGCAGAGTATGGACGTAAAAGGGTGATGCTTGAAACTGAATTTCAAA
ATGAGCCGGGCACGGGTTCAGGGCCGACGGCCGAGTTTTTTTCGTTGGTT
TCAAAGGAGCTACAGGACCCGAGGTTGGGATTGTGGAGAGGGGGGGGTCA
GGGTCTGCGCGAAGGGGGGCTCTACCCGCAGCCGTGGGGAGGAGGGGAAG
AGGGGGAGAGGGGTAAGGAAGCGGGGAGGAAGGGGAAGGGGAAGGAGAAG
GAGAAGGCTGGCAAGGAGGTCGAGGAAAGGGAGAGTGAGAGAGAGAAGGT
GTTGAGGCGATTTATGTGTCTAGGCCGGTTGGTGGGGCAGGCGCTCTTGG
ATGAACGAATGCTCGATTTTCGGTTTGCGGCCCCATTGGTGGGAGCTTTG
GCGGGAGAAATGCCGTGTCAGTCCTTGCCGGCAGCACTTCAGGAAATGGG
AACCGTGGACCCAGGTCTGGCAAGACAGCTGCAGGCGCTGATTGGGAGTT
GTGGGGTGGCTCCTTGGTGGGTGGAGGGAGGTGGGGATGGAAGGGAGGAG
GATAGGAAGGAGGAGAGGGGGGATGAGGTGGCGGATTTGTGTCTGACTTT
TTGTTTGCCGGGACATCCGTCGATTGGACTGACGTCCTCTTCAAGAAATT
TCATAACAGCAGTGGCATCAGACCAAGAAAATGACGAAGAAGACGTGACT
AGCACCAACCTCCCCCTCTACATTCAGCGCGTCCTCCAAGCCAGCCTCAC
CGAAACTGTCTCCCCACAAATCACCTCCCTCCTCGCCGGACTTTCGGACG
TGCTCATGCCGGCTTCCCTGAGGATTTTTACGAGAGAGGAAATTATGGCA
ATGATTGCGGGCGTGGGATCAGAAATGGGTGAGGATCCAGAGGAAATCCT
CGAGGCCATATCATGTGATCATGGGTACACGCGAGGGAGTCAGGCGGTGA
GGTGGTTGGTCGAGATTTTGGCGGAGATGGAAGGAAAGGAACAGAGACAA
TTTTTGATGTTCGTGACGGGGAGCCCCGGGCTGCCTGTAGGGGGGCTGAT
GGGGTGCCTGCCGAGGCTGACGGTAGTGAAGAAGGTGGCCGAGGGGCATT
TGAGGGCGGAGGGGCAGGGAGGAGTGGATAAGATGTTGCCGAGTGCGTCG
ACGTGCACGAATTATTTGAAATTGCCCGATTACTCGAGTAAGACTGTTAT
GAGGGAAAGGTTGCTGCTCAGTTTGAGTTATGGGCAGCATTCCTTTTACT
TGTCCTAG back to topCoding sequence (CDS) from alignment at scaffold_14:548894..550801+ >mRNA_6114 ID=mRNA_6114|Name=jgi.p|Nanoce1779_2|529997|organism=Nannochloropsis oceanica|type=CDS|length=5283bp|location=Sequence derived from alignment at scaffold_14:548894..550801+ (Nannochloropsis oceanica) ATGACACGACCAAAAAAACGAGGAAGCCTGTCCAAAGCCGACCCCGAACA TGACCTCCTTCTGCTCCTCCGCCTGCTCTATGGCCTTAACCGTCACCTCG CCTCGCTCCTTAACCCAATCTTCTCCTCCTGCTCCCTCATTTCCTCCTCA TCCTCTTCCTCCTCCTCAACAGCAGCGGAAGCAGCAGCATCACAAGCAGA AGTGCAAAGACTGGTGGCACGAGGAGGGCTGAGAGAGGAAGACTGGATAA ATAAACCGCTAAGTGAATGCATGGCACAGGAGCTGCAGGACCCTCTTGCC CTCGCCACGCAGCAGCTCCCCGGGTGGTGTGACCAGCTATTAACCTCCTG TCCATTTCTCCTCCCTTTCCTCGTGCGGAAGGAATATTTTTACCTGTCTT CTTTTGGGTTAGGAAGGGCAGTGCATCGGTTGTTGCTACAGCACCAGAAG CGTGGAGGAGGGGGGGGAAGAGGAGGAGGGGATGCAAGTGGTGGCGGCAG AGGAGCAGGAGGAGGAGGGAACGCACTGCAGCAGCTTAAGGTGCGGATTT CGCGTCACAAGTTGTTGGCGTCAGCAGAAAAAATTTTGGCAGAGTATGGA CGTAAAAGGGTGATGCTTGAAACTGAATTTCAAAATGAGCCGGGCACGGG TTCAGGGCCGACGGCCGAGTTTTTTTCGTTGGTTTCAAAGGAGCTACAGG ACCCGAGGTTGGGATTGTGGAGAGGGGGGGGTCAGGGTCTGCGCGAAGGG GGGCTCTACCCGCAGCCGTGGGGAGGAGGGGAAGAGGGGGAGAGGGAGAA GGTGTTGAGGCGATTTATGTGTCTAGGCCGGTTGGTGGGGCAGGCGCTCT TGGATGAACGAATGCTCGATTTTCGGTTTGCGGCCCCATTGGTGGGAGCT TTGGCGGGAGAAATGCCGTGTCAGTCCTTGCCGGCAGCACTTCAGGAAAT GGGAACCGTGGACCCAGGTCTGGCAAGACAGCTGCAGGCGCTGATTGGGA GTTGTGGGGTGGCTCCTTGGTGGGTGGAGGGAGGTGGGGATGGAAGGGAG GAGGATAGGAAGGAGGAGAGGGGGGATGAGGTGGCGGATTTGTGTCTGAC TTTTTGTTTGCCGGGACATCCGTCGATTGGACTGACGTCCTCTTCAAGAA ATTTCATAACAGCAGTGGCATCAGACCAAGAAAATGACGAAGAAGACGTG ACTAGCACCAACCTCCCCCTCTACATTCAGCGCGTCCTCCAAGCCAGCCT CACCGAAACTGTCTCCCCACAAATCACCTCCCTCCTCGCCGGACTTTCGG ACGTGCTCATGCCGGCTTCCCTGAGGATTTTTACGAGAGAGGAAATTATG GCAATGATTGCGGGCGTGGGATCAGAAATGGGTGAGGATCCAGAGGAAAT CCTCGAGGCCATATCATGTGATCATGGGTACACGCGAGGGAGTCAGGCGG TGAGGTGGTTGGTCGAGATTTTGGCGGAGATGGAAGGAAAGGAACAGAGA CAATTTTTGATGTTCGTGACGGGGAGCCCCGGGCTGCCTGTAGGGGGGCT GATGGGGTGCCTGCCGAGGCTGACGGTAGTGAAGAAGGTGGCCGAGGGGC ATTTGAGGGCGGAGGGGCAGGGAGGAGTGGATAAGATGTTGCCGAGTGCG TCGACGTGCACGAATTATTTGAAATTGCCCGATTACTCGAGTAAGACTGT TATGAGGGAAAGGTTGCTGCTCAGTTTGAGTTATGGGCAGCATTCCTTTT ACTTGTCCTAGATGACACGACCAAAAAAACGAGGAAGCCTGTCCAAAGCC GACCCCGAACATGACCTCCTTCTGCTCCTCCGCCTGCTCTATGGCCTTAA CCGTCACCTCGCCTCGCTCCTTAACCCAATCTTCTCCTCCTGCTCCCTCA TTTCCTCCTCATCCTCTTCCTCCTCCTCAACAGCAGCGGAAGCAGCAGCA TCACAAGCAGAAGTGCAAAGACTGGTGGCACGAGGAGGGCTGAGAGAGGA AGACTGGATAAATAAACCGCTAAGTGAATGCATGGCACAGGAGCTGCAGG ACCCTCTTGCCCTCGCCACGCAGCAGCTCCCCGGGTGGTGTGACCAGCTA TTAACCTCCTGTCCATTTCTCCTCCCTTTCCTCGTGCGGAAGGAATATTT TTACCTGTCTTCTTTTGGGTTAGGAAGGGCAGTGCATCGGTTGTTGCTAC AGCACCAGAAGCGTGGAGGAGGGGGGGGAAGAGGAGGAGGGGATGCAAGT GGTGGCGGCAGAGGAGCAGGAGGAGGAGGGAACGCACTGCAGCAGCTTAA GGTGCGGATTTCGCGTCACAAGTTGTTGGCGTCAGCAGAAAAAATTTTGG CAGAGTATGGACGTAAAAGGGTGATGCTTGAAACTGAATTTCAAAATGAG CCGGGCACGGGTTCAGGGCCGACGGCCGAGTTTTTTTCGTTGGTTTCAAA GGAGCTACAGGACCCGAGGTTGGGATTGTGGAGAGGGGGGGGTCAGGGTC TGCGCGAAGGGGGGCTCTACCCGCAGCCGTGGGGAGGAGGGGAAGAGGGG GAGAGGGAGAAGGTGTTGAGGCGATTTATGTGTCTAGGCCGGTTGGTGGG GCAGGCGCTCTTGGATGAACGAATGCTCGATTTTCGGTTTGCGGCCCCAT TGGTGGGAGCTTTGGCGGGAGAAATGCCGTGTCAGTCCTTGCCGGCAGCA CTTCAGGAAATGGGAACCGTGGACCCAGGTCTGGCAAGACAGCTGCAGGC GCTGATTGGGAGTTGTGGGGTGGCTCCTTGGTGGGTGGAGGGAGGTGGGG ATGGAAGGGAGGAGGATAGGAAGGAGGAGAGGGGGGATGAGGTGGCGGAT TTGTGTCTGACTTTTTGTTTGCCGGGACATCCGTCGATTGGACTGACGTC CTCTTCAAGAAATTTCATAACAGCAGTGGCATCAGACCAAGAAAATGACG AAGAAGACGTGACTAGCACCAACCTCCCCCTCTACATTCAGCGCGTCCTC CAAGCCAGCCTCACCGAAACTGTCTCCCCACAAATCACCTCCCTCCTCGC CGGACTTTCGGACGTGCTCATGCCGGCTTCCCTGAGGATTTTTACGAGAG AGGAAATTATGGCAATGATTGCGGGCGTGGGATCAGAAATGGGTGAGGAT CCAGAGGAAATCCTCGAGGCCATATCATGTGATCATGGGTACACGCGAGG GAGTCAGGCGGTGAGGTGGTTGGTCGAGATTTTGGCGGAGATGGAAGGAA AGGAACAGAGACAATTTTTGATGTTCGTGACGGGGAGCCCCGGGCTGCCT GTAGGGGGGCTGATGGGGTGCCTGCCGAGGCTGACGGTAGTGAAGAAGGT GGCCGAGGGGCATTTGAGGGCGGAGGGGCAGGGAGGAGTGGATAAGATGT TGCCGAGTGCGTCGACGTGCACGAATTATTTGAAATTGCCCGATTACTCG AGTAAGACTGTTATGAGGGAAAGGTTGCTGCTCAGTTTGAGTTATGGGCA GCATTCCTTTTACTTGTCCTAGATGACACGACCAAAAAAACGAGGAAGCC TGTCCAAAGCCGACCCCGAACATGACCTCCTTCTGCTCCTCCGCCTGCTC TATGGCCTTAACCGTCACCTCGCCTCGCTCCTTAACCCAATCTTCTCCTC CTGCTCCCTCATTTCCTCCTCATCCTCTTCCTCCTCCTCAACAGCAGCGG AAGCAGCAGCATCACAAGCAGAAGTGCAAAGACTGGTGGCACGAGGAGGG CTGAGAGAGGAAGACTGGATAAATAAACCGCTAAGTGAATGCATGGCACA GGAGCTGCAGGACCCTCTTGCCCTCGCCACGCAGCAGCTCCCCGGGTGGT GTGACCAGCTATTAACCTCCTGTCCATTTCTCCTCCCTTTCCTCGTGCGG AAGGAATATTTTTACCTGTCTTCTTTTGGGTTAGGAAGGGCAGTGCATCG GTTGTTGCTACAGCACCAGAAGCGTGGAGGAGGGGGGGGAAGAGGAGGAG GGGATGCAAGTGGTGGCGGCAGAGGAGCAGGAGGAGGAGGGAACGCACTG CAGCAGCTTAAGGTGCGGATTTCGCGTCACAAGTTGTTGGCGTCAGCAGA AAAAATTTTGGCAGAGTATGGACGTAAAAGGGTGATGCTTGAAACTGAAT TTCAAAATGAGCCGGGCACGGGTTCAGGGCCGACGGCCGAGTTTTTTTCG TTGGTTTCAAAGGAGCTACAGGACCCGAGGTTGGGATTGTGGAGAGGGGG GGGTCAGGGTCTGCGCGAAGGGGGGCTCTACCCGCAGCCGTGGGGAGGAG GGGAAGAGGGGGAGAGGGAGAAGGTGTTGAGGCGATTTATGTGTCTAGGC CGGTTGGTGGGGCAGGCGCTCTTGGATGAACGAATGCTCGATTTTCGGTT TGCGGCCCCATTGGTGGGAGCTTTGGCGGGAGAAATGCCGTGTCAGTCCT TGCCGGCAGCACTTCAGGAAATGGGAACCGTGGACCCAGGTCTGGCAAGA CAGCTGCAGGCGCTGATTGGGAGTTGTGGGGTGGCTCCTTGGTGGGTGGA GGGAGGTGGGGATGGAAGGGAGGAGGATAGGAAGGAGGAGAGGGGGGATG AGGTGGCGGATTTGTGTCTGACTTTTTGTTTGCCGGGACATCCGTCGATT GGACTGACGTCCTCTTCAAGAAATTTCATAACAGCAGTGGCATCAGACCA AGAAAATGACGAAGAAGACGTGACTAGCACCAACCTCCCCCTCTACATTC AGCGCGTCCTCCAAGCCAGCCTCACCGAAACTGTCTCCCCACAAATCACC TCCCTCCTCGCCGGACTTTCGGACGTGCTCATGCCGGCTTCCCTGAGGAT TTTTACGAGAGAGGAAATTATGGCAATGATTGCGGGCGTGGGATCAGAAA TGGGTGAGGATCCAGAGGAAATCCTCGAGGCCATATCATGTGATCATGGG TACACGCGAGGGAGTCAGGCGGTGAGGTGGTTGGTCGAGATTTTGGCGGA GATGGAAGGAAAGGAACAGAGACAATTTTTGATGTTCGTGACGGGGAGCC CCGGGCTGCCTGTAGGGGGGCTGATGGGGTGCCTGCCGAGGCTGACGGTA GTGAAGAAGGTGGCCGAGGGGCATTTGAGGGCGGAGGGGCAGGGAGGAGT GGATAAGATGTTGCCGAGTGCGTCGACGTGCACGAATTATTTGAAATTGC CCGATTACTCGAGTAAGACTGTTATGAGGGAAAGGTTGCTGCTCAGTTTG AGTTATGGGCAGCATTCCTTTTACTTGTCCTAG back to top
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