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Properties
| Property Name | Value |
|---|
| TranscriptId | 652791 |
| Track | FilteredModels2 |
| ProteinId | 652705 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:117970..120422 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_656 ID=mRNA_656|Name=jgi.p|Nanoce1779_2|652705|organism=Nannochloropsis oceanica|type=mRNA|length=2419bp
ATGGTAAAGAAAAAGGGCAAGTCAAAGCGCATGACCTTCAAGCAAAAGTA
CAAGATCGAACGGCATGTCAAGGAGCACAAACGTAAAAATAAGAAGGAAA
CCAAGCGGCGTGCCAAGTTGGGCCTCCCTCCTATCGGAATCGGGCAACGG
AAAAATGACACAAGCATTCCCAACGCCTGGCCCTTCAAGGAGCAACTCCT
CGAGGAACTCGCCACCGCCAAGCGTAACAAGGAAGACGAAGAAATCAAAA
AGAAGGAGGAGGCAGTCCTACGTCGGAAGCAGGGGGGGTTGATCGGAAAA
GACGTGACGGACCTGGTAAAGCAAGCCACGGCCGCCCAGCAATCTTTCTC
AATTACCGACGCCACCAAGGCAGCGAGCGCGCCCAAAGAACGCGCACTCG
GCCAACAGAGTCGTCGGGCCTTCATCCGTGACCTAAAAGAGGTGGTTGAA
CAAGCAGACGTCGTCCTCGAAGTCCTCGACGCGCGTGACCCCCTCGGCTC
TCGTGCTGAAGCCGTGGAGGAACTGATCCTCCGGAAGCCCAACAAAAAAC
TCGTCCTGGTCCTCAACAAAGTCGACCTTGTCCCCAAGGAGGTCGTCAGC
GAATGGCTCGCATACCTCCGTCGCTTTCACCCGACCGTAGCCTTTAAATG
CGCCACGCAGGAACAGAAATCCCAGCTGTCTCAACACGCTGGCGATGCTT
CCAAGGCATCTGCGAACGTCCTCTCCCGCAGTGGCTCCGTGGGGGCGGAA
GCCCTCATGCAACTGCTCAAGAACTATTGCCGGTCCTTGGACATCAAGAC
CAGTATTAGCGTTGGGATTGTAGGGTACCCTAACGTGGGGAAATCGTCGG
TGATTAATTCGTTGAAGCGGACCAAGGCGGCAGGTGTGTCGAGCACGCCG
GGGTTCACCAAATGCATGCAGGAGGTGCAACTCGACAAGAACATCAAGCT
TTTGGATTCTCCGGGTATTGTTTTCGATGACGCGGACGTGGAAGGGGTCC
TGCTGCGCAATTGCGTGAATGTCGACTCCCTCTCTGACCCTCCTACGGCC
GTTGCGGCTCTCCTCAAGCGGTGTGACTCACAAGACCTGATGATGATATA
CGCCCTCCCTCGCTTTGACCCTGCAGATGTCCAGGGATTCTTGGCATTGC
TTGCCCGGAAGATGGGCAAATTGTTAAGGGGGGGTGTGCCTGATCGCAAT
TCGGCAGCAAGAGTGTTGCTGCGGGATTGGAACACGGGTAAGGTTCCTTT
TTATACGAAACCACCTTCCCTACCTTCCTCCTCGGTCGAAGAGGAGGCGC
AGCTAGTGGGGACGCTGGGAGCTGCGTTTAATACCGGCACAGTGATTGAG
GAGGGCGATGCCAAGCTTATGGCTTTCTTGGAGGAGGGGGGGAAGGAGGG
AGGAAATTTCGTGGCATTTGAGAGTGGCGAGGAGGAGGAGAGTAAGGAGG
AGGAGGTGATGGATATGGATTATGAGGAGAATGGTGAGGAGAAAGAGGAG
GTGGATGGAGAGGTGGAAGTCAGTGAGGCACCAGTGTCGCGGTCGACTCG
TGGAGGGGCGAGGAAGCAGCATGCGGCCCAGGCGCTTTCGCAACAACGCG
GCACGAATAGCAAAGTGGCCGCGACCATGACAGCGACAGTGAAGGGGAAA
GTGGCGGCAGCTTCTTTGCCCAAGGAGAAGGGGCCGAAGAAGAGGGGAAA
GGCTGTGGCATCAAGCTCAGCCATAAGCGCCGTCAGCATGATGATGACAC
TGGACAACGTGGACGAGGATGGATTGAACCCTCAAGTGAATCAAGCAGCG
AAGAAAAAGTGGGCGGCGGAGAAGAAAAAAGCGCGCAAGATAACTAGGCG
AACGGGAGGGTCGGGAGCAACAGCCATGGACGAGGCGTACGATTTTGCCA
CCGATTTTTCGTAGGGGAAGATGCAAGTGTCATGTGTGAGGATGAGAGGA
TCAAAGAGTAAATATTCCGTCTCGTGTTTTTAGCATTCAATGTGCCAGAT
GCAATGGTAAGGCAAGGAGGAGAGCAAACCGAAGGAGGGGGACGAGAATG
GACGAGGCGCACATATATCAGCACAGAAAAGAAAGAAATTTGCACAACTA
GAACCGAAACCGACATGTCACATGACCATTTCATTTCTCTCATTTTTTTG
CTCTCAGATCTTATTTTCCAGTTTGACGGGTGGGTTGGGGAACGGGTAAA
ATGGCCTTATCGTCGTTTAAGGCCGCAGGTCTTCGACACGGCAGTCGTGG
CCGGGAAGATCAAGAATCTCGACGACATCGGTGCCCTATTTGTCGGCCAG
CTGGCGGCGCTGACGGATGCTGCACCCATCCGTGACGTCTGCTACCATGG
CCTCGACGCCCGGATCCCGCCAGGGGATATCGATGGGGATGTGGACGCGC
GCCTCGACATCCCCCGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|652705 >mRNA_656-protein ID=mRNA_656-protein|Name=jgi.p|Nanoce1779_2|652705|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MVKKKGKSKRMTFKQKYKIERHVKEHKRKNKKETKRRAKLGLPPIGIGQR
KNDTSIPNAWPFKEQLLEELATAKRNKEDEEIKKKEEAVLRRKQGGLIGK
DVTDLVKQATAAQQSFSITDATKAASAPKERALGQQSRRAFIRDLKEVVE
QADVVLEVLDARDPLGSRAEAVEELILRKPNKKLVLVLNKVDLVPKEVVS
EWLAYLRRFHPTVAFKCATQEQKSQLSQHAGDASKASANVLSRSGSVGAE
ALMQLLKNYCRSLDIKTSISVGIVGYPNVGKSSVINSLKRTKAAGVSSTP
GFTKCMQEVQLDKNIKLLDSPGIVFDDADVEGVLLRNCVNVDSLSDPPTA
VAALLKRCDSQDLMMIYALPRFDPADVQGFLALLARKMGKLLRGGVPDRN
SAARVLLRDWNTGKVPFYTKPPSLPSSSVEEEAQLVGTLGAAFNTGTVIE
EGDAKLMAFLEEGGKEGGNFVAFESGEEEESKEEEVMDMDYEENGEEKEE
VDGEVEVSEAPVSRSTRGGARKQHAAQALSQQRGTNSKVAATMTATVKGK
VAAASLPKEKGPKKRGKAVASSSAISAVSMMMTLDNVDEDGLNPQVNQAA
KKKWAAEKKKARKITRRTGGSGATAMDEAYDFATDFS* back to topmRNA from alignment at scaffold_2:117970..120422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_656 ID=mRNA_656|Name=jgi.p|Nanoce1779_2|652705|organism=Nannochloropsis oceanica|type=mRNA|length=2453bp|location=Sequence derived from alignment at scaffold_2:117970..120422- (Nannochloropsis oceanica)
ATGGTAAAGAAAAAGGGCAAGTCAAAGCGCATGACCTTCAAGCAAAAGTA
CAAGATCGAACGGCATGTCAAGGAGCACAAACGTAAAAATAAGAAGGAAA
CCAAGCGGCGTGCCAAGTTGGGCCTCCCTCCTATCGGAATCGGGCAACGG
AAAAATGACACAAGCATTCCCAACGCCTGGCCCTTCAAGGAGCAACTCCT
CGAGGAACTCGCCACCGCCAAGCGTAACAAGGAAGACGAAGAAATCAAAA
AGAAGGAGGAGGCAGTCCTACGTCGGAAGCAGGGGGGGTTGATCGGAAAA
GACGTGACGGACCTGGTAAAGCAAGCCACGGCCGCCCAGCAATCTTTCTC
AATTACCGACGCCACCAAGGCAGCGAGCGCGCCCAAAGAACGCGCACTCG
GCCAACAGAGTCGTCGGGCCTTCATCCGTGACCTAAAAGAGGTGGTTGAA
CAAGCAGACGTCGTCCTCGAAGTCCTCGACGCGCGTGACCCCCTCGGCTC
TCGTGCTGAAGCCGTGGAGGAACTGATCCTCCGGAAGCCCAACAAAAAAC
TCGTCCTGGTCCTCAACAAAGTCGACCTTGTCCCCAAGGAGGTCGTCAGC
GAATGGCTCGCATACCTCCGTCGCTTTCACCCGACCGTAGCCTTTAAATG
CGCCACGCAGGAACAGAAATCCCAGCTGTCTCAACACGCTGGCGATGCTT
CCAAGGCATCTGCGAACGTCCTCTCCCGCAGTGGCTCCGTGGGGGCGGAA
GCCCTCATGCAACTGCTCAAGAACTATTGCCGGTCCTTGGACATCAAGAC
CAGTATTAGCGTTGGGATTGTAGGGTACCCTAACGTGGGGAAATCGTCGG
TGATTAATTCGTTGAAGCGGACCAAGGCGGCAGGTGTGTCGAGCACGCCG
GGGTTCACCAAATGCATGCAGGAGGTGCAACTCGACAAGAACATCAAGCT
TTTGGATTCTCCGGGTATTGTTTTCGATGACGCGGACGTGGAAGGGGTCC
TGCTGCGCAATTGCGTGAATGTCGACTCCCTCTCTGACCCTCCTACGGCC
GTTGCGGCTCTCCTCAAGCGGTGTGACTCACAAGACCTGATGATGATATA
CGCCCTCCCTCGCTTTGACCCTGCAGATGTCCAGGGATTCTTGGCATTGC
TTGCCCGGAAGATGGGCAAATTGTTAAGGGGGGGTGTGCCTGATCGCAAT
TCGGCAGCAAGAGTGTTGCTGCGGGATTGGAACACGGGTAAGGTTCCTTT
TTATACGAAACCACCTTCCCTACCTTCCTCCTCGGTCGAAGAGGAGGCGC
AGCTAGTGGGGACGCTGGGAGCTGCGTTTAATACCGGCACAGTGATTGAG
GAGGGCGATGCCAAGCTTATGGCTTTCTTGGAGGAGGGGGGGAAGGAGGG
AGGAAATTTCGTGGCATTTGAGAGTGGCGGTGTTGCGGGGGGGGGGGATG
ATGGAGGATATAGAGGAGGAGGAGAGTAAGGAGGAGGAGGTGATGGATAT
GGATTATGAGGAGAATGGTGAGGAGAAAGAGGAGGTGGATGGAGAGGTGG
AAGTCAGTGAGGCACCAGTGTCGCGGTCGACTCGTGGAGGGGCGAGGAAG
CAGCATGCGGCCCAGGCGCTTTCGCAACAACGCGGCACGAATAGCAAAGT
GGCCGCGACCATGACAGCGACAGTGAAGGGGAAAGTGGCGGCAGCTTCTT
TGCCCAAGGAGAAGGGGCCGAAGAAGAGGGGAAAGGCTGTGGCATCAAGC
TCAGCCATAAGCGCCGTCAGCATGATGATGACACTGGACAACGTGGACGA
GGATGGATTGAACCCTCAAGTGAATCAAGCAGCGAAGAAAAAGTGGGCGG
CGGAGAAGAAAAAAGCGCGCAAGATAACTAGGCGAACGGGAGGGTCGGGA
GCAACAGCCATGGACGAGGCGTACGATTTTGCCACCGATTTTTCGTAGGG
GAAGATGCAAGTGTCATGTGTGAGGATGAGAGGATCAAAGAGTAAATATT
CCGTCTCGTGTTTTTAGCATTCAATGTGCCAGATGCAATGGTAAGGCAAG
GAGGAGAGCAAACCGAAGGAGGGGGACGAGAATGGACGAGGCGCACATAT
ATCAGCACAGAAAAGAAAGAAATTTGCACAACTAGAACCGAAACCGACAT
GTCACATGACCATTTCATTTCTCTCATTTTTTTGCTCTCAGATCTTATTT
TCCAGTTTGACGGGTGGGTTGGGGAACGGGTAAAATGGCCTTATCGTCGT
TTAAGGCCGCAGGTCTTCGACACGGCAGTCGTGGCCGGGAAGATCAAGAA
TCTCGACGACATCGGTGCCCTATTTGTCGGCCAGCTGGCGGCGCTGACGG
ATGCTGCACCCATCCGTGACGTCTGCTACCATGGCCTCGACGCCCGGATC
CCGCCAGGGGATATCGATGGGGATGTGGACGCGCGCCTCGACATCCCCCG
GGG back to topCoding sequence (CDS) from alignment at scaffold_2:117970..120422- >mRNA_656 ID=mRNA_656|Name=jgi.p|Nanoce1779_2|652705|organism=Nannochloropsis oceanica|type=CDS|length=3828bp|location=Sequence derived from alignment at scaffold_2:117970..120422- (Nannochloropsis oceanica)
AGGAGGAGGAGAGTAAGGAGGAGGAGGTGATGGATATGGATTATGAGGAG
AATGGTGAGGAGAAAGAGGAGGTGGATGGAGAGGTGGAAGTCAGTGAGGC
ACCAGTGTCGCGGTCGACTCGTGGAGGGGCGAGGAAGCAGCATGCGGCCC
AGGCGCTTTCGCAACAACGCGGCACGAATAGCAAAGTGGCCGCGACCATG
ACAGCGACAGTGAAGGGGAAAGTGGCGGCAGCTTCTTTGCCCAAGGAGAA
GGGGCCGAAGAAGAGGGGAAAGGCTGTGGCATCAAGCTCAGCCATAAGCG
CCGTCAGCATGATGATGACACTGGACAACGTGGACGAGGATGGATTGAAC
CCTCAAGTGAATCAAGCAGCGAAGAAAAAGTGGGCGGCGGAGAAGAAAAA
AGCGCGCAAGATAACTAGGCGAACGGGAGGGTCGGGAGCAACAGCCATGG
ACGAGGCGTACGATTTTGCCACCGATTTTTCGTAGATGGTAAAGAAAAAG
GGCAAGTCAAAGCGCATGACCTTCAAGCAAAAGTACAAGATCGAACGGCA
TGTCAAGGAGCACAAACGTAAAAATAAGAAGGAAACCAAGCGGCGTGCCA
AGTTGGGCCTCCCTCCTATCGGAATCGGGCAACGGAAAAATGACACAAGC
ATTCCCAACGCCTGGCCCTTCAAGGAGCAACTCCTCGAGGAACTCGCCAC
CGCCAAGCGTAACAAGGAAGACGAAGAAATCAAAAAGAAGGAGGAGGCAG
TCCTACGTCGGAAGCAGGGGGGGTTGATCGGAAAAGACGTGACGGACCTG
GTAAAGCAAGCCACGGCCGCCCAGCAATCTTTCTCAATTACCGACGCCAC
CAAGGCAGCGAGCGCGCCCAAAGAACGCGCACTCGGCCAACAGAGTCGTC
GGGCCTTCATCCGTGACCTAAAAGAGGTGGTTGAACAAGCAGACGTCGTC
CTCGAAGTCCTCGACGCGCGTGACCCCCTCGGCTCTCGTGCTGAAGCCGT
GGAGGAACTGATCCTCCGGAAGCCCAACAAAAAACTCGTCCTGGTCCTCA
ACAAAGTCGACCTTGTCCCCAAGGAGGTCGTCAGCGAATGGCTCGCATAC
CTCCGTCGCTTTCACCCGACCGTAGCCTTTAAATGCGCCACGCAGGAACA
GAAATCCCAGCTGTCTCAACACGCTGGCGATGCTTCCAAGGCATCTGCGA
ACGTCCTCTCCCGCAGTGGCTCCGTGGGGGCGGAAGCCCTCATGCAACTG
CTCAAGAACTATTGCCGGTCCTTGGACATCAAGACCAGTATTAGCGTTGG
GATTGTAGGGTACCCTAACGTGGGGAAATCGTCGGTGATTAATTCGTTGA
AGCGGACCAAGGCGGCAGGTGTGTCGAGCACGCCGGGGTTCACCAAATGC
ATGCAGGAGGTGCAACTCGACAAGAACATCAAGCTTTTGGATTCTCCGGG
TATTGTTTTCGATGACGCGGACGTGGAAGGGGTCCTGCTGCGCAATTGCG
TGAATGTCGACTCCCTCTCTGACCCTCCTACGGCCGTTGCGGCTCTCCTC
AAGCGGTGTGACTCACAAGACCTGATGATGATATACGCCCTCCCTCGCTT
TGACCCTGCAGATGTCCAGGGATTCTTGGCATTGCTTGCCCGGAAGATGG
GCAAATTGTTAAGGGGGGGTGTGCCTGATCGCAATTCGGCAGCAAGAGTG
TTGCTGCGGGATTGGAACACGGGTAAGGTTCCTTTTTATACGAAACCACC
TTCCCTACCTTCCTCCTCGGTCGAAGAGGAGGCGCAGCTAGTGGGGACGC
TGGGAGCTGCGTTTAATACCGGCACAGTGATTGAGGAGGGCGATGCCAAG
CTTATGGCTTTCTTGGAGGAGGGGGGGAAGGAGGGAGGAAATTTCGTGGC
ATTTGAGAGTGGCGAGGAGGAGGAGAGTAAGGAGGAGGAGGTGATGGATA
TGGATTATGAGGAGAATGGTGAGGAGAAAGAGGAGGTGGATGGAGAGGTG
GAAGTCAGTGAGGCACCAGTGTCGCGGTCGACTCGTGGAGGGGCGAGGAA
GCAGCATGCGGCCCAGGCGCTTTCGCAACAACGCGGCACGAATAGCAAAG
TGGCCGCGACCATGACAGCGACAGTGAAGGGGAAAGTGGCGGCAGCTTCT
TTGCCCAAGGAGAAGGGGCCGAAGAAGAGGGGAAAGGCTGTGGCATCAAG
CTCAGCCATAAGCGCCGTCAGCATGATGATGACACTGGACAACGTGGACG
AGGATGGATTGAACCCTCAAGTGAATCAAGCAGCGAAGAAAAAGTGGGCG
GCGGAGAAGAAAAAAGCGCGCAAGATAACTAGGCGAACGGGAGGGTCGGG
AGCAACAGCCATGGACGAGGCGTACGATTTTGCCACCGATTTTTCGTAGA
TGGTAAAGAAAAAGGGCAAGTCAAAGCGCATGACCTTCAAGCAAAAGTAC
AAGATCGAACGGCATGTCAAGGAGCACAAACGTAAAAATAAGAAGGAAAC
CAAGCGGCGTGCCAAGTTGGGCCTCCCTCCTATCGGAATCGGGCAACGGA
AAAATGACACAAGCATTCCCAACGCCTGGCCCTTCAAGGAGCAACTCCTC
GAGGAACTCGCCACCGCCAAGCGTAACAAGGAAGACGAAGAAATCAAAAA
GAAGGAGGAGGCAGTCCTACGTCGGAAGCAGGGGGGGTTGATCGGAAAAG
ACGTGACGGACCTGGTAAAGCAAGCCACGGCCGCCCAGCAATCTTTCTCA
ATTACCGACGCCACCAAGGCAGCGAGCGCGCCCAAAGAACGCGCACTCGG
CCAACAGAGTCGTCGGGCCTTCATCCGTGACCTAAAAGAGGTGGTTGAAC
AAGCAGACGTCGTCCTCGAAGTCCTCGACGCGCGTGACCCCCTCGGCTCT
CGTGCTGAAGCCGTGGAGGAACTGATCCTCCGGAAGCCCAACAAAAAACT
CGTCCTGGTCCTCAACAAAGTCGACCTTGTCCCCAAGGAGGTCGTCAGCG
AATGGCTCGCATACCTCCGTCGCTTTCACCCGACCGTAGCCTTTAAATGC
GCCACGCAGGAACAGAAATCCCAGCTGTCTCAACACGCTGGCGATGCTTC
CAAGGCATCTGCGAACGTCCTCTCCCGCAGTGGCTCCGTGGGGGCGGAAG
CCCTCATGCAACTGCTCAAGAACTATTGCCGGTCCTTGGACATCAAGACC
AGTATTAGCGTTGGGATTGTAGGGTACCCTAACGTGGGGAAATCGTCGGT
GATTAATTCGTTGAAGCGGACCAAGGCGGCAGGTGTGTCGAGCACGCCGG
GGTTCACCAAATGCATGCAGGAGGTGCAACTCGACAAGAACATCAAGCTT
TTGGATTCTCCGGGTATTGTTTTCGATGACGCGGACGTGGAAGGGGTCCT
GCTGCGCAATTGCGTGAATGTCGACTCCCTCTCTGACCCTCCTACGGCCG
TTGCGGCTCTCCTCAAGCGGTGTGACTCACAAGACCTGATGATGATATAC
GCCCTCCCTCGCTTTGACCCTGCAGATGTCCAGGGATTCTTGGCATTGCT
TGCCCGGAAGATGGGCAAATTGTTAAGGGGGGGTGTGCCTGATCGCAATT
CGGCAGCAAGAGTGTTGCTGCGGGATTGGAACACGGGTAAGGTTCCTTTT
TATACGAAACCACCTTCCCTACCTTCCTCCTCGGTCGAAGAGGAGGCGCA
GCTAGTGGGGACGCTGGGAGCTGCGTTTAATACCGGCACAGTGATTGAGG
AGGGCGATGCCAAGCTTATGGCTTTCTTGGAGGAGGGGGGGAAGGAGGGA
GGAAATTTCGTGGCATTTGAGAGTGGCG back to top
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