|
Properties
Property Name | Value |
TranscriptId | 248768 |
Track | FilteredModels2 |
ProteinId | 248682 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:101395..102646 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8985 ID=mRNA_8985|Name=jgi.p|Nanoce1779_2|248682|organism=Nannochloropsis oceanica|type=mRNA|length=630bp CCCTCCCTCGCTCCTTTCCTCACTCCCTGATTAGATGGACCCTTTGCGTC CTGGACCCGGGGGGAGCACCAGCAGCGGCACTATCTCCCTAGGCGTCTCA GAAGCTCGCTTTCCCCCTACCTACGGTTCTGTGGACGACGGAGGCATCGG CATGGTCAACAGAAGTGGATGGAGGGATGGGGGAAAGGAGAGCGGGTTTC CGCCTTTGCGTCGATCGTACTCGCTGAGCGCGATTAGAGAGGGTGTACCA ACCCTTGGTCGGCACGAGAACCTGGTAGCGGTCTGCTTGCTCATTATGGC GTTGCTTTGCCTAGGCATCATCCTCTTTGTCCTGCGGCCTATTCTCATCC CCTTCGCCGTCTCCCTCCTTTTCTACTACCTTCTCCAACCCGTCGTCAAC ACCCTCAACAAATCACTCTTCCCATTCTTCCTCCCTCCTCCCCCTCCCCT CAATCCCTCGTGCAGCCTCCTGCCATTTGCTGTCGGGAGTTGTATGTGGG CTGTGCGGAACTAGGGGCCCCTGTGAGCGACGAAGGGGAAGGAAGCATGG CTTCCTCTTCAATTGGGGGCAGGTTTCTCTCCCGAGCCGTCGGAGGGCTG CGACGACGCGCCGGATACGATACCGTCGCC back to topprotein sequence of jgi.p|Nanoce1779_2|248682 >mRNA_8985-protein ID=mRNA_8985-protein|Name=jgi.p|Nanoce1779_2|248682|organism=Nannochloropsis oceanica|type=polypeptide|length=160bp MDPLRPGPGGSTSSGTISLGVSEARFPPTYGSVDDGGIGMVNRSGWRDGG KESGFPPLRRSYSLSAIREGVPTLGRHENLVAVCLLIMALLCLGIILFVL RPILIPFAVSLLFYYLLQPVVNTLNKSLFPFFLPPPPPLNPSCSLLPFAV GSCMWAVRN* back to topmRNA from alignment at scaffold_30:101395..102646- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8985 ID=mRNA_8985|Name=jgi.p|Nanoce1779_2|248682|organism=Nannochloropsis oceanica|type=mRNA|length=1252bp|location=Sequence derived from alignment at scaffold_30:101395..102646- (Nannochloropsis oceanica) CCCTCCCTCGCTCCTTTCCTCACTCCCTGATTAGATGGACCCTTTGCGTC
CTGGACCCGGGGGGAGCACCAGCAGCGGCACTATCTCCCTAGGCGTCTCA
GAAGCTCGCTTTCCCCCTACCTACGGTTCTGTGGACGACGGAGGCATCGG
CATGGTCAACAGAAGTGGATGGAGGGATGGGGGAAAGGAGAGCGGGTTTC
CGCCTTTGCGTCGATCGTACTCGCTGAGCGCGATTAGAGAGGGTGTACCG
TAAGTAGATAGAAAGCGGGACGGGGACCATGGGAGGTTCTGAGGAGAGGA
GAAGGAACTTATGGAGCCCTGCCACAATTTTCGGGTCAGGCCACTCGAGC
AATTAGCGTCCGACTTTTTCTTCACCCAATCATCCTTTCTCGTTCCTTTC
CTCCCTTCATCCATACCAAAGAACCCTTGGTCGGCACGAGAACCTGGTAG
CGGTCTGCTTGCTCATTATGGCGTTGCTTTGCCTAGGTAGCGTTGATGGA
GAGGAAGAGGGAAGAAGGGGAGGGAGGGAGATGCCTCTGAGCTCGGAATG
GGAAGGGGTTGGCGCCTGTCTATAAGTTCAATCTATCTATCTATCTATCA
TACACACACCCCGCATATCAAATGCCATTAATCATACCCTCTTATCCTCG
GTCCCCAGGCATCATCCTCTTTGTCCTGCGGCCTATTCTCATCCCCTTCG
CCGTCTCCCTCCTTTTCTACTACCTTCTCCAACCCGTCGTCAACACCCTC
AACAAAGTGAGGACCGGAGGGAGGGAGGGAGATAGGGAGGGAGGGAGGAA
GGAAGGAAGGAAGGAAGGAGGGAAAGAAGGAAAAAGCATTAAGGTAACCT
ACAATCTCCTCCTGAGCACCTCATTTTCCTAGTCACTCTTCCCATTCTTC
CTCCCTCCTCCCCCTCCCCTCAATCCCTCGTGCAGCCTCCTGCCATTTGC
TGTCGGGAGTTGTATGTGGGCTGTGCGGAACTAGGGGCCCCTGTGAGCGA
CGAAGGGGAAGGAAGCATGGCTTCCTCTTCAATTGGGGGCAGGTTTCTCT
CCCGAGCCGTCGGAGGGCTGCGACGACGGTGGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAAGAAGAGGGTATCGTTACAAGCGGCATATCTCGTCTC
ATAACTTTATGATCCTTCCCTCCCTTCCTCTCCCCCTCCCTCCTTCCCTC
TCTCCCATGCTATCTTCCTCAATAACCCAGCGCCGGATACGATACCGTCG
CC back to topCoding sequence (CDS) from alignment at scaffold_30:101395..102646- >mRNA_8985 ID=mRNA_8985|Name=jgi.p|Nanoce1779_2|248682|organism=Nannochloropsis oceanica|type=CDS|length=1920bp|location=Sequence derived from alignment at scaffold_30:101395..102646- (Nannochloropsis oceanica) TCACTCTTCCCATTCTTCCTCCCTCCTCCCCCTCCCCTCAATCCCTCGTG CAGCCTCCTGCCATTTGCTGTCGGGAGTTGTATGTGGGCTGTGCGGAACT AGGCATCATCCTCTTTGTCCTGCGGCCTATTCTCATCCCCTTCGCCGTCT CCCTCCTTTTCTACTACCTTCTCCAACCCGTCGTCAACACCCTCAACAAA AACCCTTGGTCGGCACGAGAACCTGGTAGCGGTCTGCTTGCTCATTATGG CGTTGCTTTGCCTAGATGGACCCTTTGCGTCCTGGACCCGGGGGGAGCAC CAGCAGCGGCACTATCTCCCTAGGCGTCTCAGAAGCTCGCTTTCCCCCTA CCTACGGTTCTGTGGACGACGGAGGCATCGGCATGGTCAACAGAAGTGGA TGGAGGGATGGGGGAAAGGAGAGCGGGTTTCCGCCTTTGCGTCGATCGTA CTCGCTGAGCGCGATTAGAGAGGGTGTACCTCACTCTTCCCATTCTTCCT CCCTCCTCCCCCTCCCCTCAATCCCTCGTGCAGCCTCCTGCCATTTGCTG TCGGGAGTTGTATGTGGGCTGTGCGGAACTAGGCATCATCCTCTTTGTCC TGCGGCCTATTCTCATCCCCTTCGCCGTCTCCCTCCTTTTCTACTACCTT CTCCAACCCGTCGTCAACACCCTCAACAAAAACCCTTGGTCGGCACGAGA ACCTGGTAGCGGTCTGCTTGCTCATTATGGCGTTGCTTTGCCTAGATGGA CCCTTTGCGTCCTGGACCCGGGGGGAGCACCAGCAGCGGCACTATCTCCC TAGGCGTCTCAGAAGCTCGCTTTCCCCCTACCTACGGTTCTGTGGACGAC GGAGGCATCGGCATGGTCAACAGAAGTGGATGGAGGGATGGGGGAAAGGA GAGCGGGTTTCCGCCTTTGCGTCGATCGTACTCGCTGAGCGCGATTAGAG AGGGTGTACCTCACTCTTCCCATTCTTCCTCCCTCCTCCCCCTCCCCTCA ATCCCTCGTGCAGCCTCCTGCCATTTGCTGTCGGGAGTTGTATGTGGGCT GTGCGGAACTAGGCATCATCCTCTTTGTCCTGCGGCCTATTCTCATCCCC TTCGCCGTCTCCCTCCTTTTCTACTACCTTCTCCAACCCGTCGTCAACAC CCTCAACAAAAACCCTTGGTCGGCACGAGAACCTGGTAGCGGTCTGCTTG CTCATTATGGCGTTGCTTTGCCTAGATGGACCCTTTGCGTCCTGGACCCG GGGGGAGCACCAGCAGCGGCACTATCTCCCTAGGCGTCTCAGAAGCTCGC TTTCCCCCTACCTACGGTTCTGTGGACGACGGAGGCATCGGCATGGTCAA CAGAAGTGGATGGAGGGATGGGGGAAAGGAGAGCGGGTTTCCGCCTTTGC GTCGATCGTACTCGCTGAGCGCGATTAGAGAGGGTGTACCTCACTCTTCC CATTCTTCCTCCCTCCTCCCCCTCCCCTCAATCCCTCGTGCAGCCTCCTG CCATTTGCTGTCGGGAGTTGTATGTGGGCTGTGCGGAACTAGGCATCATC CTCTTTGTCCTGCGGCCTATTCTCATCCCCTTCGCCGTCTCCCTCCTTTT CTACTACCTTCTCCAACCCGTCGTCAACACCCTCAACAAAAACCCTTGGT CGGCACGAGAACCTGGTAGCGGTCTGCTTGCTCATTATGGCGTTGCTTTG CCTAGATGGACCCTTTGCGTCCTGGACCCGGGGGGAGCACCAGCAGCGGC ACTATCTCCCTAGGCGTCTCAGAAGCTCGCTTTCCCCCTACCTACGGTTC TGTGGACGACGGAGGCATCGGCATGGTCAACAGAAGTGGATGGAGGGATG GGGGAAAGGAGAGCGGGTTTCCGCCTTTGCGTCGATCGTACTCGCTGAGC GCGATTAGAGAGGGTGTACC back to top
|