jgi.p|Nanoce1779_2|606246, gene_9513 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|606246
Unique Namegene_9513
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_34:208329..217076 -

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Properties
Property NameValue
TranscriptId606332
ProteinId606246
Product nameGlucose / Sorbosone dehydrogenase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_34supercontigscaffold_34:208329..217076 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016901oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
GO:0048038quinone binding
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL052ncniL052Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00220NO21G00220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606246mRNA_9513-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606246mRNA_9513Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|606246

>mRNA_9513-protein ID=mRNA_9513-protein|Name=jgi.p|Nanoce1779_2|606246|organism=Nannochloropsis oceanica|type=polypeptide|length=1021bp
MRHALPMRMVAMVAATLLLSFSVLTQAQVKSLQTDLQVQTVWDNIWGIVQ
VVFLPGGKVMTVHKPGELHVYDSIYSKSQDYTTILDIKDEVYSWWDHGLL
SAALHPDFPKKPFLYISYSAEYPDKPWNDNCEVDPRLSRMSNPPDTRPYC
KTMAKILRLRVDEAFTVAEFDAELFHDWCTSTYTHHVGTLTFLSDGSMVY
GAGDGSHFQGIDHGQPQDECTDPNGPKDQGVFLSQKDGYLRGKFIKIKAS
SLLKDQHLEVNTDYTVLSRGARNPFRNTVDPKTGDVYFGDVGSSVWEEIN
RLPNPLNNNGQVTNFGWPCIEGTNSVSDIFQNFLKMNRLDTCRDVYAGGS
QQPAFTYRFGAVDPDFPTECADADASISGITFYTGAKLPSRYKGKLFWVD
YSKKCGFWFDTRGDGTPDFSHAHAFMATVGAQSGGVTDVKTGPDGYLYVA
DYSGGKLYRVGDAADKEMEGLLLKGPPASVTNKENDLWIESTPNSYEWAF
GDTVTYALESPTLRIDMAAVKWRVVNGHCVLNPCTGKQDCHFHEVSLNTQ
QSKGPGSSFKPSPHPMESYIKITATVPKPDGSGDMLTKELITHTIAYNYM
ILSDPPGLPIIFEELTCAASPCIASQMAKTNPGFAAQVVQAHMDELYVFS
SWTSTNAATGRKKVVTTNLYEDVADSDYLVVANYKRFAVTVDPLMAVPQG
IIVEGGYKLATISWTAPRGDQIPDYVIVTINDAKGAIVKSIMVTANKATA
DVRLDATADTYTAELSFYDSATTTRGPRAKRVQFTTNGVPSKDKKNCIYD
PFELKMKKGAKPGQADKYQLGIVGDYPTTIRAKQTMKLTFNIVSETATTL
MVNLLAKGDFTWVGGKVVPVPAGTDGLMTVLFTVEGEIMDKEEYYVDALL
LKDPKDYKSSFVADSVSKIFGVVKPATFPTATSLFNSLVQDSVNRIFNAA
DSPSVPSSASAASAAAAAAAAAAGSGSAAAAEAAADTPDGPAAKTPEAVP
LAATVVEKVLDPATGEVIED*
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Synonyms
Publications