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Properties
Property Name | Value |
TranscriptId | 606408 |
Track | FilteredModels2 |
ProteinId | 606322 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_35 | supercontig | scaffold_35:35889..37597 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9306 ID=mRNA_9306|Name=jgi.p|Nanoce1779_2|606322|organism=Nannochloropsis oceanica|type=mRNA|length=1379bp ACAGGGCTCTCTGGAGACGCCTGCGTCTGCCGTGGTGGAACGCAGGAGGG TGCAGCAGCCTGCAGAGAAGCAACCTCTCCGCGAAGGACAGACTTGACAC CTACGCGTCTGAAAGATGGCACCCAATAACGGCATCAAGGTCGGCGACAG CAACAACAGTCATAGAAGTAACATAGACAGCACCCCGCCCAGCAGCAATA ATAGCAGCAACAACAATTTGGTTGAGGAACAGGAAGGCTTGTATGTTGAG GCTCCTCCCTCCCAGCCGATCCTCCCTCCTCCGTCTCTCCGTCGTGGATG CTGCGGCTGCCCACCGGTGCGGCATGTGAAGCATGCCCCGGCCTTCCAGC ACGTGCCGCATATCAAGCTTGGATATCGCGTTGGATTTTCCGTCCGAAAT TGCCTGGTGTCTGTCTTCACCTTCCACAACGAATCCATAAACATCTGGTC CCATCTATCCGGTACGGTCTATGTGCTCTACGCCCTCTCGTGCTTCCTGC GCATGGACGGTCTCCACGTCAACATCGACGACTCGGAATACAAAGCGATT CTAACCTTCCTCCTGTGTGCCGTGGCGTGTTTGAGTTTCAGCACTTGCTA CCATACATTTGGCTGCATGTCGGAGAACATGTTCAAACTGTTGTTGCGTG TAGACCTAATCGGCATCGCACTCTTGATCTGGTTTGAAAGGAGGGGAGGG AGGGAGGGAGGAAGGAAGGAAGGGAGGGAGGCGGGGAGGGATAGATTGAT GGGGTATGTATTGATGTCAGTGTAAGGGGTTCTAGCTCGGGCATTTTGAG TCGAAGATTGTTTCATCGCCGCTCTCCTTCCCTCCCTTCCGCCCTACCTC CCTCCCTTCCGCCCTCCCCCTTCCTCCCTCCTCCATCCCAGGGGCTCCTA CGTTCCCGGTATCCACTACGCTTTCGCCTGCTTTCCTCGCTGGCAGCGTG TCTACCACTTTCTGACCCTCCTCCTCCTCCTCCTGGGTTTGGGCGGGGCG GCGCTCACCGACACGCACTGTCCTCGCCAGTCCCTCGTGCGCACTGGCAC ATTCGCCCTACTCGTGACCTTCGGCCTCGTCCCTTCCCTCCATTGGTGCA TGCTCGTGCCTGCCCATGTCCGAGCAATCTTTCTGGATAACTTAATCGGA ATGTTCTCGTCCTATTCCTTAGGATTTTGCTTGTGGGCCTCCCGTTTCCC TGAACGATTCTTCCCTCAGACGCCGCTGTTGGGGCTGTGGTTCTCAAGTC ATCAGCTGTGGCACATGTGTATCTTTATGGCGGTCAAGATCTGGTTGGCG GGGATCTTGGAGATGCACATGGCCTTGCATGAGATGGGGTGTGAGCTGTT GAGCTAGAGAGGGTGCGGAGTGAGGCAGG back to topprotein sequence of jgi.p|Nanoce1779_2|606322 >mRNA_9306-protein ID=mRNA_9306-protein|Name=jgi.p|Nanoce1779_2|606322|organism=Nannochloropsis oceanica|type=polypeptide|length=220bp MAPNNGIKVGDSNNSHRSNIDSTPPSSNNSSNNNLVEEQEGLYVEAPPSQ PILPPPSLRRGCCGCPPVRHVKHAPAFQHVPHIKLGYRVGFSVRNCLVSV FTFHNESINIWSHLSGTVYVLYALSCFLRMDGLHVNIDDSEYKAILTFLL CAVACLSFSTCYHTFGCMSENMFKLLLRVDLIGIALLIWFERRGGREGGR KEGREAGRDRLMGYVLMSV* back to topmRNA from alignment at scaffold_35:35889..37597- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9306 ID=mRNA_9306|Name=jgi.p|Nanoce1779_2|606322|organism=Nannochloropsis oceanica|type=mRNA|length=1709bp|location=Sequence derived from alignment at scaffold_35:35889..37597- (Nannochloropsis oceanica) ACAGGGCTCTCTGGAGACGCCTGCGTCTGCCGTGGTGGAACGCAGGAGGG
TGCAGCAGCCTGCAGAGAAGCAACCTCTCCGCGAAGGACAGACTTGACAC
CTACGCGTCTGAAAGATGGCACCCAATAACGGCATCAAGGTCGGCGACAG
CAACAACAGTCATAGAAGTAACATAGACAGCACCCCGCCCAGCAGCAATA
ATAGCAGCAACAACAATTTGGTTGAGGAACAGGAAGGCTTGTATGTTGAG
GCTCCTCCCTCCCAGCCGATCCTCCCTCCTCCGTCTCTCCGTCGTGGATG
CTGCGGCTGCCCACCGGTGCGGCATGTGAAGCATGCCCCGGCCTTCCAGC
ACGTGCCGCATATCAAGCTTGGATATCGCGTTGGATTTTCCGTCCGAAAT
TGCCTGGTGGTGAGCAAGGGGGGACGGGTGAAGGGGGAGGATGGGGTCAG
ACACACATCAATTTGTAGTGTTGTGCTATTGTATGACTGTGATTACCTAT
CACATACGAATGGAAGAAAATGAGACAAGGGGCTTACCAATTCACAATCT
GTCCCTTTTTCTTCTCCCTTCCTCCGTCATTCCGGCAGTCTGTCTTCACC
TTCCACAACGAATCCATAAACATCTGGTCCCATCTATCCGGTACGGTCTA
TGTGCTCTACGCCCTCTCGTGCTTCCTGCGCATGGACGGTCTCCACGTCA
ACATCGACGACTCGGAATACAAAGCGATTCTAACCTTCCTCCTGTGTGCC
GTGGCGTGTTTGAGTTTCAGCACTTGCTACCATACATTTGGCTGCATGTC
GGTATGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGCCCTATCTCGTC
CCCTCTTCCCATCTAAGATCATTTTACGTATTCTCCTGCCCATGCTTCTG
TCATCTTATTCCATCCCTTGCTCCATTCCTCCATACCTTGCTCCTTCTTC
AGGAGAACATGTTCAAACTGTTGTTGCGTGTAGACCTAATCGGCATCGCA
CTCTTGATCTGGTTTGAAAGGAGGGGAGGGAGGGAGGGAGGAAGGAAGGA
AGGGAGGGAGGCGGGGAGGGATAGATTGATGGGGTATGTATTGATGTCAG
TGTAAGGGGTTCTAGCTCGGGCATTTTGAGTCGAAGATTGTTTCATCGCC
GCTCTCCTTCCCTCCCTTCCGCCCTACCTCCCTCCCTTCCGCCCTCCCCC
TTCCTCCCTCCTCCATCCCAGGGGCTCCTACGTTCCCGGTATCCACTACG
CTTTCGCCTGCTTTCCTCGCTGGCAGCGTGTCTACCACTTTCTGACCCTC
CTCCTCCTCCTCCTGGGTTTGGGCGGGGCGGCGCTCACCGACACGCACTG
TCCTCGCCAGTCCCTCGTGCGCACTGGCACATTCGCCCTACTCGTGACCT
TCGGCCTCGTCCCTTCCCTCCATTGGTGCATGCTCGTGCCTGCCCATGTC
CGAGCAATCTTTCTGGATAACTTAATCGGAATGTTCTCGTCCTATTCCTT
AGGATTTTGCTTGTGGGCCTCCCGTTTCCCTGAACGATTCTTCCCTCAGA
CGCCGCTGTTGGGGCTGTGGTTCTCAAGTCATCAGCTGTGGCACATGTGT
ATCTTTATGGCGGTCAAGATCTGGTTGGCGGGGATCTTGGAGATGCACAT
GGCCTTGCATGAGATGGGGTGTGAGCTGTTGAGCTAGAGAGGGTGCGGAG
TGAGGCAGG back to topCoding sequence (CDS) from alignment at scaffold_35:35889..37597- >mRNA_9306 ID=mRNA_9306|Name=jgi.p|Nanoce1779_2|606322|organism=Nannochloropsis oceanica|type=CDS|length=1980bp|location=Sequence derived from alignment at scaffold_35:35889..37597- (Nannochloropsis oceanica) GAGAACATGTTCAAACTGTTGTTGCGTGTAGACCTAATCGGCATCGCACT CTTGATCTGGTTTGAAAGGAGGGGAGGGAGGGAGGGAGGAAGGAAGGAAG GGAGGGAGGCGGGGAGGGATAGATTGATGGGGTATGTATTGATGTCAGTG TAATCTGTCTTCACCTTCCACAACGAATCCATAAACATCTGGTCCCATCT ATCCGGTACGGTCTATGTGCTCTACGCCCTCTCGTGCTTCCTGCGCATGG ACGGTCTCCACGTCAACATCGACGACTCGGAATACAAAGCGATTCTAACC TTCCTCCTGTGTGCCGTGGCGTGTTTGAGTTTCAGCACTTGCTACCATAC ATTTGGCTGCATGTCGATGGCACCCAATAACGGCATCAAGGTCGGCGACA GCAACAACAGTCATAGAAGTAACATAGACAGCACCCCGCCCAGCAGCAAT AATAGCAGCAACAACAATTTGGTTGAGGAACAGGAAGGCTTGTATGTTGA GGCTCCTCCCTCCCAGCCGATCCTCCCTCCTCCGTCTCTCCGTCGTGGAT GCTGCGGCTGCCCACCGGTGCGGCATGTGAAGCATGCCCCGGCCTTCCAG CACGTGCCGCATATCAAGCTTGGATATCGCGTTGGATTTTCCGTCCGAAA TTGCCTGGTGGAGAACATGTTCAAACTGTTGTTGCGTGTAGACCTAATCG GCATCGCACTCTTGATCTGGTTTGAAAGGAGGGGAGGGAGGGAGGGAGGA AGGAAGGAAGGGAGGGAGGCGGGGAGGGATAGATTGATGGGGTATGTATT GATGTCAGTGTAATCTGTCTTCACCTTCCACAACGAATCCATAAACATCT GGTCCCATCTATCCGGTACGGTCTATGTGCTCTACGCCCTCTCGTGCTTC CTGCGCATGGACGGTCTCCACGTCAACATCGACGACTCGGAATACAAAGC GATTCTAACCTTCCTCCTGTGTGCCGTGGCGTGTTTGAGTTTCAGCACTT GCTACCATACATTTGGCTGCATGTCGATGGCACCCAATAACGGCATCAAG GTCGGCGACAGCAACAACAGTCATAGAAGTAACATAGACAGCACCCCGCC CAGCAGCAATAATAGCAGCAACAACAATTTGGTTGAGGAACAGGAAGGCT TGTATGTTGAGGCTCCTCCCTCCCAGCCGATCCTCCCTCCTCCGTCTCTC CGTCGTGGATGCTGCGGCTGCCCACCGGTGCGGCATGTGAAGCATGCCCC GGCCTTCCAGCACGTGCCGCATATCAAGCTTGGATATCGCGTTGGATTTT CCGTCCGAAATTGCCTGGTGGAGAACATGTTCAAACTGTTGTTGCGTGTA GACCTAATCGGCATCGCACTCTTGATCTGGTTTGAAAGGAGGGGAGGGAG GGAGGGAGGAAGGAAGGAAGGGAGGGAGGCGGGGAGGGATAGATTGATGG GGTATGTATTGATGTCAGTGTAATCTGTCTTCACCTTCCACAACGAATCC ATAAACATCTGGTCCCATCTATCCGGTACGGTCTATGTGCTCTACGCCCT CTCGTGCTTCCTGCGCATGGACGGTCTCCACGTCAACATCGACGACTCGG AATACAAAGCGATTCTAACCTTCCTCCTGTGTGCCGTGGCGTGTTTGAGT TTCAGCACTTGCTACCATACATTTGGCTGCATGTCGATGGCACCCAATAA CGGCATCAAGGTCGGCGACAGCAACAACAGTCATAGAAGTAACATAGACA GCACCCCGCCCAGCAGCAATAATAGCAGCAACAACAATTTGGTTGAGGAA CAGGAAGGCTTGTATGTTGAGGCTCCTCCCTCCCAGCCGATCCTCCCTCC TCCGTCTCTCCGTCGTGGATGCTGCGGCTGCCCACCGGTGCGGCATGTGA AGCATGCCCCGGCCTTCCAGCACGTGCCGCATATCAAGCTTGGATATCGC GTTGGATTTTCCGTCCGAAATTGCCTGGTG back to top
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