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Properties
| Property Name | Value |
|---|
| TranscriptId | 610096 |
| Track | FilteredModels2 |
| ProteinId | 610010 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_48 | supercontig | scaffold_48:34077..35410 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10170 ID=mRNA_10170|Name=jgi.p|Nanoce1779_2|610010|organism=Nannochloropsis oceanica|type=mRNA|length=1334bp
AAGCGTGGTACCTCCGGCTCGGTACTGTGGGAGGATGGAAGGAGGGAGGT
GGAGAGGGATGGAGAGGGAGATGGGCGGAAAAGGATAGATGCTTAGAGGT
CAAAAAGTCGGATGACCTCAACTGACACCCGTTCCTCTCTCTCCCCCTCC
CTCCGTCCCTCCGTCCCTCCCTCCGTCCCTCCCTCCCTCATCCCCTGTCC
AGGTTCGAACATACGATGACGGTCCTGGACTCGCGCCATATTGCTGTCTT
TGGCGGTTACATGTATGGGGCGACGACGCAGCAGGCTTACAACGACTTGT
ACATCTTAGTGGTGAGAATGAGGGGAAGGAAGGAGGGAGAAAGGGAGAAA
GGGAGAAGGAAGGGAGGAAGGGAGGAAGGGAAAAAGGGTGGAAGGGGAGA
GAGGGGGGACGGAGACATATCAACGAGTTGTGGGTTGCTTCGTTTCAAGT
CGATAACAATCCCTCCATCTCTCCAGATTGAGTCGATGAGTCTTGCCGCC
GGCCTGGTCTGCCATTGGGCAAAGTTCCCCCTCGCTTTCTCCCCCTCCTC
CCTCCCTTTGTCTCCCTTGGCCCCCTATTGGGAGGTAGCGGCTGCCAAAG
AGCGCGAGTACCCATCCGCTCGCTGTAGGCATACCGCAGTCTGGAGCCCG
TCTCTGGAGGGGGGCGAGGACGGGGAGGGAGGAGGAAGTGGGAGAGCAAG
AGGAGGAGGAGGAGTTGCAAGCCTGGATGGGAAGCTGTTGATCTTCGGAG
GAGGCAGTAGGTACGTGGTTTCGAGTCTCTTGACCTCGCCTCTTGCCATC
CGTCCCTCCTTCCTTCATCCTATCCTCATCCCCTCGGCGCCCTCCTTCCC
TCCCTCCTTCACCCATTTTACCTCCCTGCGCATACAGGCGTCCGAAGGAC
ACCCACCTGTACGAGTTGACGTTTTCCCGCGGCAAGGCCGCCGTGGATTT
CTTCCAGGCGTATCAAGACTGGTCGTGCCTCTGGAGGGCGGCCTGGGAGG
AGGCGCGAGGGGGGCTGGATCAGGCAGCTTTCGCCAAATTGACCGGCGCA
CATGACGAGGGCCACGTTCCCGACAGCCCAGAGGACTTTATTGAACACGT
GAAGGAGAGAGGCGAGGGGGTAGGCTTTGACTACCGCACGGACCCCTCCA
GGATTATCGTCGTCGTTCCCTCCCGCCCTGACGATGTGGCCATCGTTGCC
ATACCGCAGGAACCGCCTGTGGTCATCCTCCCCTCCACCCTCGCCGTCGA
CCTCCTCCAGCTCCTGGCTTTTGACGAGGAGGGGGCAGGGCGGGAGGGTG
GGAGGGAGGGAGGGGTGTTTCGACACACCGTGGG back to topprotein sequence of jgi.p|Nanoce1779_2|610010 >mRNA_10170-protein ID=mRNA_10170-protein|Name=jgi.p|Nanoce1779_2|610010|organism=Nannochloropsis oceanica|type=polypeptide|length=280bp
MTVLDSRHIAVFGGYMYGATTQQAYNDLYILVVRMRGRKEGEREKGRRKG
GREEGKKGGRGERGDGDISTSCGLLRFKSITIPPSLQIESMSLAAGLVCH
WAKFPLAFSPSSLPLSPLAPYWEVAAAKEREYPSARCRHTAVWSPSLEGG
EDGEGGGSGRARGGGGVASLDGKLLIFGGGSRYVVSSLLTSPLAIRPSFL
HPILIPSAPSFPPSFTHFTSLRIQASEGHPPVRVDVFPRQGRRGFLPGVS
RLVVPLEGGLGGGARGAGSGSFRQIDRRT* back to topmRNA from alignment at scaffold_48:34077..35410- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10170 ID=mRNA_10170|Name=jgi.p|Nanoce1779_2|610010|organism=Nannochloropsis oceanica|type=mRNA|length=1334bp|location=Sequence derived from alignment at scaffold_48:34077..35410- (Nannochloropsis oceanica)
AAGCGTGGTACCTCCGGCTCGGTACTGTGGGAGGATGGAAGGAGGGAGGT
GGAGAGGGATGGAGAGGGAGATGGGCGGAAAAGGATAGATGCTTAGAGGT
CAAAAAGTCGGATGACCTCAACTGACACCCGTTCCTCTCTCTCCCCCTCC
CTCCGTCCCTCCGTCCCTCCCTCCGTCCCTCCCTCCCTCATCCCCTGTCC
AGGTTCGAACATACGATGACGGTCCTGGACTCGCGCCATATTGCTGTCTT
TGGCGGTTACATGTATGGGGCGACGACGCAGCAGGCTTACAACGACTTGT
ACATCTTAGTGGTGAGAATGAGGGGAAGGAAGGAGGGAGAAAGGGAGAAA
GGGAGAAGGAAGGGAGGAAGGGAGGAAGGGAAAAAGGGTGGAAGGGGAGA
GAGGGGGGACGGAGACATATCAACGAGTTGTGGGTTGCTTCGTTTCAAGT
CGATAACAATCCCTCCATCTCTCCAGATTGAGTCGATGAGTCTTGCCGCC
GGCCTGGTCTGCCATTGGGCAAAGTTCCCCCTCGCTTTCTCCCCCTCCTC
CCTCCCTTTGTCTCCCTTGGCCCCCTATTGGGAGGTAGCGGCTGCCAAAG
AGCGCGAGTACCCATCCGCTCGCTGTAGGCATACCGCAGTCTGGAGCCCG
TCTCTGGAGGGGGGCGAGGACGGGGAGGGAGGAGGAAGTGGGAGAGCAAG
AGGAGGAGGAGGAGTTGCAAGCCTGGATGGGAAGCTGTTGATCTTCGGAG
GAGGCAGTAGGTACGTGGTTTCGAGTCTCTTGACCTCGCCTCTTGCCATC
CGTCCCTCCTTCCTTCATCCTATCCTCATCCCCTCGGCGCCCTCCTTCCC
TCCCTCCTTCACCCATTTTACCTCCCTGCGCATACAGGCGTCCGAAGGAC
ACCCACCTGTACGAGTTGACGTTTTCCCGCGGCAAGGCCGCCGTGGATTT
CTTCCAGGCGTATCAAGACTGGTCGTGCCTCTGGAGGGCGGCCTGGGAGG
AGGCGCGAGGGGGGCTGGATCAGGCAGCTTTCGCCAAATTGACCGGCGCA
CATGACGAGGGCCACGTTCCCGACAGCCCAGAGGACTTTATTGAACACGT
GAAGGAGAGAGGCGAGGGGGTAGGCTTTGACTACCGCACGGACCCCTCCA
GGATTATCGTCGTCGTTCCCTCCCGCCCTGACGATGTGGCCATCGTTGCC
ATACCGCAGGAACCGCCTGTGGTCATCCTCCCCTCCACCCTCGCCGTCGA
CCTCCTCCAGCTCCTGGCTTTTGACGAGGAGGGGGCAGGGCGGGAGGGTG
GGAGGGAGGGAGGGGTGTTTCGACACACCGTGGG back to topCoding sequence (CDS) from alignment at scaffold_48:34077..35410- >mRNA_10170 ID=mRNA_10170|Name=jgi.p|Nanoce1779_2|610010|organism=Nannochloropsis oceanica|type=CDS|length=840bp|location=Sequence derived from alignment at scaffold_48:34077..35410- (Nannochloropsis oceanica)
ATGACGGTCCTGGACTCGCGCCATATTGCTGTCTTTGGCGGTTACATGTA
TGGGGCGACGACGCAGCAGGCTTACAACGACTTGTACATCTTAGTGGTGA
GAATGAGGGGAAGGAAGGAGGGAGAAAGGGAGAAAGGGAGAAGGAAGGGA
GGAAGGGAGGAAGGGAAAAAGGGTGGAAGGGGAGAGAGGGGGGACGGAGA
CATATCAACGAGTTGTGGGTTGCTTCGTTTCAAGTCGATAACAATCCCTC
CATCTCTCCAGATTGAGTCGATGAGTCTTGCCGCCGGCCTGGTCTGCCAT
TGGGCAAAGTTCCCCCTCGCTTTCTCCCCCTCCTCCCTCCCTTTGTCTCC
CTTGGCCCCCTATTGGGAGGTAGCGGCTGCCAAAGAGCGCGAGTACCCAT
CCGCTCGCTGTAGGCATACCGCAGTCTGGAGCCCGTCTCTGGAGGGGGGC
GAGGACGGGGAGGGAGGAGGAAGTGGGAGAGCAAGAGGAGGAGGAGGAGT
TGCAAGCCTGGATGGGAAGCTGTTGATCTTCGGAGGAGGCAGTAGGTACG
TGGTTTCGAGTCTCTTGACCTCGCCTCTTGCCATCCGTCCCTCCTTCCTT
CATCCTATCCTCATCCCCTCGGCGCCCTCCTTCCCTCCCTCCTTCACCCA
TTTTACCTCCCTGCGCATACAGGCGTCCGAAGGACACCCACCTGTACGAG
TTGACGTTTTCCCGCGGCAAGGCCGCCGTGGATTTCTTCCAGGCGTATCA
AGACTGGTCGTGCCTCTGGAGGGCGGCCTGGGAGGAGGCGCGAGGGGGGC
TGGATCAGGCAGCTTTCGCCAAATTGACCGGCGCACATGA back to top
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