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Properties
| Property Name | Value |
|---|
| TranscriptId | 586609 |
| Track | FilteredModels2 |
| ProteinId | 586523 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:820016..821874 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4093 ID=mRNA_4093|Name=jgi.p|Nanoce1779_2|586523|organism=Nannochloropsis oceanica|type=mRNA|length=1151bp
ACAGATGATGAACAGGCGTTGTGGCGTGGTGTGCGTTGGCAGCCTTAACA
TCGACTTATTATGCTATCTTGGCGGCCAATTTCCATCGCCCGGAGAGACT
GTCCATGGCCTCCGCTTCTCCACGTGCCTTGGGGGGAAAGGGGGGAACCA
GGCGGTGATGGCGGCGCGCCTTGGGGCCCCGACTGCCATGGTGGGAAGGG
TGGGAAATGATTTGTATGGCAACACAATAAGGGAGGCTTTCGAGGGGAAC
GGTGTCGACACGAGGTACCTCCTCAAGACGGCAGACGGGATCGCCACGGG
CACTGCTCACATCCTGGTCAATGGTGAAGGCCAAAATATGATCATCGTAA
TAGCTGGTGCGAACGGGCAATTAACACCCGCGGACGTACAGGCAGCAGAA
GATGTCATAGCGCAAGCAGCAGTCTTAATGGTGCAGATGGAAATCCCTAC
CGAGACGAGTTTTGAGGCCCTGCGTCTTGCCAAAGCCCATGACGTCTTCA
GCATCCTCAACCCGGCCCCAGCACCGGATGGAAGGCTCAGTCAGGAGTTT
CTCGCCTTCGCCTCCCTCGTCTGCCCCAACGAGACGGAACTTGCCATTCT
CACCCAGCTGCCGGTTGGGACCATTCCTGAGGTCCAAGCGGCAGCTCACA
GACTCCGAGAGATGGGTGCTGCGAGTGTACTCGTTACGCTGGGAGCTCAG
GGTGCTTTGTTGATGACGGCGGAGAACGCGGCACAGGGTGGTCAGTTAAT
TCCTTCGAAGCGTGTTGAGCGAGTGGTGGACACGAGTGGCGCAGGCGATT
GTTACATCGGAAGCTTGGCAGCATTTCTCTCTCGAGGGCAATCACCTTAT
CCTTATATGTGCGTTACGTACGATTTAAAGGCGCCTCTCAATGAAGCTGC
CACCAAGGCCGGTGAGATGGCCTCACTAAGTGTCTGCAAGGCGGGGACAC
AAACATCCTATCCTTTTGCGAAAGATCTCCCGGCACACTTGCAGCTTCCA
CAAATAGCTTGAGTCAGCATTATCAGAGGGAGAGGAAGCAGAGGAGGTTT
GTGGAGCAGGAAGGTGCAAATTTCAATTTGGAAGGTAAAATAGGAAGAAA
GTGAATTTGAGTGCAAATAAAAAAGAAATAAGAAATGTAAGCGGCTGCAG
A back to topprotein sequence of jgi.p|Nanoce1779_2|586523 >mRNA_4093-protein ID=mRNA_4093-protein|Name=jgi.p|Nanoce1779_2|586523|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MMNRRCGVVCVGSLNIDLLCYLGGQFPSPGETVHGLRFSTCLGGKGGNQA
VMAARLGAPTAMVGRVGNDLYGNTIREAFEGNGVDTRYLLKTADGIATGT
AHILVNGEGQNMIIVIAGANGQLTPADVQAAEDVIAQAAVLMVQMEIPTE
TSFEALRLAKAHDVFSILNPAPAPDGRLSQEFLAFASLVCPNETELAILT
QLPVGTIPEVQAAAHRLREMGAASVLVTLGAQGALLMTAENAAQGGQLIP
SKRVERVVDTSGAGDCYIGSLAAFLSRGQSPYPYMCVTYDLKAPLNEAAT
KAGEMASLSVCKAGTQTSYPFAKDLPAHLQLPQIA* back to topmRNA from alignment at scaffold_8:820016..821874+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4093 ID=mRNA_4093|Name=jgi.p|Nanoce1779_2|586523|organism=Nannochloropsis oceanica|type=mRNA|length=1859bp|location=Sequence derived from alignment at scaffold_8:820016..821874+ (Nannochloropsis oceanica)
ACAGATGATGAACAGGCGTTGTGGCGTGGTGTGCGTTGGCAGCCTTAACA
TCGACTTATTATGCTATCTTGGCGGCCAATTTCCATCGCCCGGTGAGTCG
TGAGACAGCCAGTGCTGCATGGGGCCGCATTTTTAACACATACATGCAAC
ACGCCGCTAATCCTCTAGGAGAGACTGTCCATGGCCTCCGCTTCTCCACG
TGCCTTGGGGGGAAAGGGGGGAACCAGGCGGTGATGGCGGCGCGCCTTGG
GGCCCCGACTGCCATGGTGGGAAGGGTGGGAAATGATTTGTATGGCAACA
CAATAAGGGAGGCTTTCGAGGGGAACGGTGTCGACACGAGGTAATGGAAT
GTATACCTGTATACTGAAATGCGATTTCTTTCCACTTATTCTGGTGTCTC
ATCATTATTAATGTACGTCAGGTACCTCCTCAAGACGGCAGACGGGATCG
CCACGGGCACTGCTCACATCCTGGTCAATGGTGAAGGCCAAAATATGATC
ATCGTAATAGCTGGTGCGAACGGGCAATTAACACCCGCGGACGTACAGGC
AGCAGAAGATGTCATAGCGCAAGCAGCAGTCTTAATGGTACGTGCTTGTA
TGGAGGTGTGATCTCGTTGCCTGTGAAACAAACGACTGCATTTACATAAT
ATGGCCGATGCACAGGTGCAGATGGAAATCCCTACCGAGACGAGTTTTGA
GGCCCTGCGTCTTGCCAAAGCCCATGACGTCTTCAGCATCCTCAACCCGG
CCCCAGCACCGGATGGAAGGCTCAGTCAGGTCCGTGCGATTTCAACGAAA
GTCACTGCGGGCACTGTCATAGGGTTGATATCGATTTCACAAGCTGAAAA
ATTGACATGGTTATTGGCAACCTCATGAATTCGGGGGTAATATCATTGTA
GGGCTTCCTGAGGGCGTCAGTGCCGAGTGTAGGGAGATCATACAAAATCT
TGGTAGGAGGGGAGAGGTCCTCCCAGCCCTCCTTACCATTTCTGTGACAT
TCTTGTTCCTACCACTACACTTAACAACCGACCAAAAACCGGTCCTACTC
GCTGCTGACCATACATATATATCATATATTACACATATTGCATCTCTCTC
CCCTTCCCCCCCGACAGGAGTTTCTCGCCTTCGCCTCCCTCGTCTGCCCC
AACGAGACGGAACTTGCCATTCTCACCCAGCTGCCGGTTGGGACCATTCC
TGAGGTCCAAGCGGCAGCTCACAGACTCCGAGAGATGGGTGCTGCGAGTG
TACTCGTTACGCTGGGAGCTCAGGGTGCTTTGTTGATGACGGCGGAGAAC
GCGGCACAGGGTGGTCAGTTAATTCCTTCGAAGCGTGTTGAGCGAGTGGT
GGACACGAGTGGCGCAGGCGATTGTTACATCGGAAGCTTGGCAGCATTTC
TCTCTCGAGGGGTACGTCAACGGGAAGAGCGTGCGTTTTTGTGAGTAAAT
TCTATTTCTCCCCCCCCCCCCTCTCTCTCTCTCTCTCTCTGTCACTCTCT
CCCTCTCCCTCTCCCACTCTTCTCTCTGTATTTTCTGTTTTTACAGCAAT
CACCTTATCCTTATATGTGCGTTACGTACGATTTAAAGGCGCCTCTCAAT
GAAGCTGCCACCAAGGCCGGTGAGATGGCCTCACTAAGTGTCTGCAAGGC
GGGGACACAAACATCCTATCCTTTTGCGAAAGATCTCCCGGCACACTTGC
AGCTTCCACAAATAGCTTGAGTCAGCATTATCAGAGGGAGAGGAAGCAGA
GGAGGTTTGTGGAGCAGGAAGGTGCAAATTTCAATTTGGAAGGTAAAATA
GGAAGAAAGTGAATTTGAGTGCAAATAAAAAAGAAATAAGAAATGTAAGC
GGCTGCAGA back to topCoding sequence (CDS) from alignment at scaffold_8:820016..821874+ >mRNA_4093 ID=mRNA_4093|Name=jgi.p|Nanoce1779_2|586523|organism=Nannochloropsis oceanica|type=CDS|length=6048bp|location=Sequence derived from alignment at scaffold_8:820016..821874+ (Nannochloropsis oceanica)
ATGATGAACAGGCGTTGTGGCGTGGTGTGCGTTGGCAGCCTTAACATCGA
CTTATTATGCTATCTTGGCGGCCAATTTCCATCGCCCGGAGAGACTGTCC
ATGGCCTCCGCTTCTCCACGTGCCTTGGGGGGAAAGGGGGGAACCAGGCG
GTGATGGCGGCGCGCCTTGGGGCCCCGACTGCCATGGTGGGAAGGGTGGG
AAATGATTTGTATGGCAACACAATAAGGGAGGCTTTCGAGGGGAACGGTG
TCGACACGAGGTACCTCCTCAAGACGGCAGACGGGATCGCCACGGGCACT
GCTCACATCCTGGTCAATGGTGAAGGCCAAAATATGATCATCGTAATAGC
TGGTGCGAACGGGCAATTAACACCCGCGGACGTACAGGCAGCAGAAGATG
TCATAGCGCAAGCAGCAGTCTTAATGGTGCAGATGGAAATCCCTACCGAG
ACGAGTTTTGAGGCCCTGCGTCTTGCCAAAGCCCATGACGTCTTCAGCAT
CCTCAACCCGGCCCCAGCACCGGATGGAAGGCTCAGTCAGGAGTTTCTCG
CCTTCGCCTCCCTCGTCTGCCCCAACGAGACGGAACTTGCCATTCTCACC
CAGCTGCCGGTTGGGACCATTCCTGAGGTCCAAGCGGCAGCTCACAGACT
CCGAGAGATGGGTGCTGCGAGTGTACTCGTTACGCTGGGAGCTCAGGGTG
CTTTGTTGATGACGGCGGAGAACGCGGCACAGGGTGGTCAGTTAATTCCT
TCGAAGCGTGTTGAGCGAGTGGTGGACACGAGTGGCGCAGGCGATTGTTA
CATCGGAAGCTTGGCAGCATTTCTCTCTCGAGGGCAATCACCTTATCCTT
ATATGTGCGTTACGTACGATTTAAAGGCGCCTCTCAATGAAGCTGCCACC
AAGGCCGGTGAGATGGCCTCACTAAGTGTCTGCAAGGCGGGGACACAAAC
ATCCTATCCTTTTGCGAAAGATCTCCCGGCACACTTGCAGCTTCCACAAA
TAGCTTGAATGATGAACAGGCGTTGTGGCGTGGTGTGCGTTGGCAGCCTT
AACATCGACTTATTATGCTATCTTGGCGGCCAATTTCCATCGCCCGGAGA
GACTGTCCATGGCCTCCGCTTCTCCACGTGCCTTGGGGGGAAAGGGGGGA
ACCAGGCGGTGATGGCGGCGCGCCTTGGGGCCCCGACTGCCATGGTGGGA
AGGGTGGGAAATGATTTGTATGGCAACACAATAAGGGAGGCTTTCGAGGG
GAACGGTGTCGACACGAGGTACCTCCTCAAGACGGCAGACGGGATCGCCA
CGGGCACTGCTCACATCCTGGTCAATGGTGAAGGCCAAAATATGATCATC
GTAATAGCTGGTGCGAACGGGCAATTAACACCCGCGGACGTACAGGCAGC
AGAAGATGTCATAGCGCAAGCAGCAGTCTTAATGGTGCAGATGGAAATCC
CTACCGAGACGAGTTTTGAGGCCCTGCGTCTTGCCAAAGCCCATGACGTC
TTCAGCATCCTCAACCCGGCCCCAGCACCGGATGGAAGGCTCAGTCAGGA
GTTTCTCGCCTTCGCCTCCCTCGTCTGCCCCAACGAGACGGAACTTGCCA
TTCTCACCCAGCTGCCGGTTGGGACCATTCCTGAGGTCCAAGCGGCAGCT
CACAGACTCCGAGAGATGGGTGCTGCGAGTGTACTCGTTACGCTGGGAGC
TCAGGGTGCTTTGTTGATGACGGCGGAGAACGCGGCACAGGGTGGTCAGT
TAATTCCTTCGAAGCGTGTTGAGCGAGTGGTGGACACGAGTGGCGCAGGC
GATTGTTACATCGGAAGCTTGGCAGCATTTCTCTCTCGAGGGCAATCACC
TTATCCTTATATGTGCGTTACGTACGATTTAAAGGCGCCTCTCAATGAAG
CTGCCACCAAGGCCGGTGAGATGGCCTCACTAAGTGTCTGCAAGGCGGGG
ACACAAACATCCTATCCTTTTGCGAAAGATCTCCCGGCACACTTGCAGCT
TCCACAAATAGCTTGAATGATGAACAGGCGTTGTGGCGTGGTGTGCGTTG
GCAGCCTTAACATCGACTTATTATGCTATCTTGGCGGCCAATTTCCATCG
CCCGGAGAGACTGTCCATGGCCTCCGCTTCTCCACGTGCCTTGGGGGGAA
AGGGGGGAACCAGGCGGTGATGGCGGCGCGCCTTGGGGCCCCGACTGCCA
TGGTGGGAAGGGTGGGAAATGATTTGTATGGCAACACAATAAGGGAGGCT
TTCGAGGGGAACGGTGTCGACACGAGGTACCTCCTCAAGACGGCAGACGG
GATCGCCACGGGCACTGCTCACATCCTGGTCAATGGTGAAGGCCAAAATA
TGATCATCGTAATAGCTGGTGCGAACGGGCAATTAACACCCGCGGACGTA
CAGGCAGCAGAAGATGTCATAGCGCAAGCAGCAGTCTTAATGGTGCAGAT
GGAAATCCCTACCGAGACGAGTTTTGAGGCCCTGCGTCTTGCCAAAGCCC
ATGACGTCTTCAGCATCCTCAACCCGGCCCCAGCACCGGATGGAAGGCTC
AGTCAGGAGTTTCTCGCCTTCGCCTCCCTCGTCTGCCCCAACGAGACGGA
ACTTGCCATTCTCACCCAGCTGCCGGTTGGGACCATTCCTGAGGTCCAAG
CGGCAGCTCACAGACTCCGAGAGATGGGTGCTGCGAGTGTACTCGTTACG
CTGGGAGCTCAGGGTGCTTTGTTGATGACGGCGGAGAACGCGGCACAGGG
TGGTCAGTTAATTCCTTCGAAGCGTGTTGAGCGAGTGGTGGACACGAGTG
GCGCAGGCGATTGTTACATCGGAAGCTTGGCAGCATTTCTCTCTCGAGGG
CAATCACCTTATCCTTATATGTGCGTTACGTACGATTTAAAGGCGCCTCT
CAATGAAGCTGCCACCAAGGCCGGTGAGATGGCCTCACTAAGTGTCTGCA
AGGCGGGGACACAAACATCCTATCCTTTTGCGAAAGATCTCCCGGCACAC
TTGCAGCTTCCACAAATAGCTTGAATGATGAACAGGCGTTGTGGCGTGGT
GTGCGTTGGCAGCCTTAACATCGACTTATTATGCTATCTTGGCGGCCAAT
TTCCATCGCCCGGAGAGACTGTCCATGGCCTCCGCTTCTCCACGTGCCTT
GGGGGGAAAGGGGGGAACCAGGCGGTGATGGCGGCGCGCCTTGGGGCCCC
GACTGCCATGGTGGGAAGGGTGGGAAATGATTTGTATGGCAACACAATAA
GGGAGGCTTTCGAGGGGAACGGTGTCGACACGAGGTACCTCCTCAAGACG
GCAGACGGGATCGCCACGGGCACTGCTCACATCCTGGTCAATGGTGAAGG
CCAAAATATGATCATCGTAATAGCTGGTGCGAACGGGCAATTAACACCCG
CGGACGTACAGGCAGCAGAAGATGTCATAGCGCAAGCAGCAGTCTTAATG
GTGCAGATGGAAATCCCTACCGAGACGAGTTTTGAGGCCCTGCGTCTTGC
CAAAGCCCATGACGTCTTCAGCATCCTCAACCCGGCCCCAGCACCGGATG
GAAGGCTCAGTCAGGAGTTTCTCGCCTTCGCCTCCCTCGTCTGCCCCAAC
GAGACGGAACTTGCCATTCTCACCCAGCTGCCGGTTGGGACCATTCCTGA
GGTCCAAGCGGCAGCTCACAGACTCCGAGAGATGGGTGCTGCGAGTGTAC
TCGTTACGCTGGGAGCTCAGGGTGCTTTGTTGATGACGGCGGAGAACGCG
GCACAGGGTGGTCAGTTAATTCCTTCGAAGCGTGTTGAGCGAGTGGTGGA
CACGAGTGGCGCAGGCGATTGTTACATCGGAAGCTTGGCAGCATTTCTCT
CTCGAGGGCAATCACCTTATCCTTATATGTGCGTTACGTACGATTTAAAG
GCGCCTCTCAATGAAGCTGCCACCAAGGCCGGTGAGATGGCCTCACTAAG
TGTCTGCAAGGCGGGGACACAAACATCCTATCCTTTTGCGAAAGATCTCC
CGGCACACTTGCAGCTTCCACAAATAGCTTGAATGATGAACAGGCGTTGT
GGCGTGGTGTGCGTTGGCAGCCTTAACATCGACTTATTATGCTATCTTGG
CGGCCAATTTCCATCGCCCGGAGAGACTGTCCATGGCCTCCGCTTCTCCA
CGTGCCTTGGGGGGAAAGGGGGGAACCAGGCGGTGATGGCGGCGCGCCTT
GGGGCCCCGACTGCCATGGTGGGAAGGGTGGGAAATGATTTGTATGGCAA
CACAATAAGGGAGGCTTTCGAGGGGAACGGTGTCGACACGAGGTACCTCC
TCAAGACGGCAGACGGGATCGCCACGGGCACTGCTCACATCCTGGTCAAT
GGTGAAGGCCAAAATATGATCATCGTAATAGCTGGTGCGAACGGGCAATT
AACACCCGCGGACGTACAGGCAGCAGAAGATGTCATAGCGCAAGCAGCAG
TCTTAATGGTGCAGATGGAAATCCCTACCGAGACGAGTTTTGAGGCCCTG
CGTCTTGCCAAAGCCCATGACGTCTTCAGCATCCTCAACCCGGCCCCAGC
ACCGGATGGAAGGCTCAGTCAGGAGTTTCTCGCCTTCGCCTCCCTCGTCT
GCCCCAACGAGACGGAACTTGCCATTCTCACCCAGCTGCCGGTTGGGACC
ATTCCTGAGGTCCAAGCGGCAGCTCACAGACTCCGAGAGATGGGTGCTGC
GAGTGTACTCGTTACGCTGGGAGCTCAGGGTGCTTTGTTGATGACGGCGG
AGAACGCGGCACAGGGTGGTCAGTTAATTCCTTCGAAGCGTGTTGAGCGA
GTGGTGGACACGAGTGGCGCAGGCGATTGTTACATCGGAAGCTTGGCAGC
ATTTCTCTCTCGAGGGCAATCACCTTATCCTTATATGTGCGTTACGTACG
ATTTAAAGGCGCCTCTCAATGAAGCTGCCACCAAGGCCGGTGAGATGGCC
TCACTAAGTGTCTGCAAGGCGGGGACACAAACATCCTATCCTTTTGCGAA
AGATCTCCCGGCACACTTGCAGCTTCCACAAATAGCTTGAATGATGAACA
GGCGTTGTGGCGTGGTGTGCGTTGGCAGCCTTAACATCGACTTATTATGC
TATCTTGGCGGCCAATTTCCATCGCCCGGAGAGACTGTCCATGGCCTCCG
CTTCTCCACGTGCCTTGGGGGGAAAGGGGGGAACCAGGCGGTGATGGCGG
CGCGCCTTGGGGCCCCGACTGCCATGGTGGGAAGGGTGGGAAATGATTTG
TATGGCAACACAATAAGGGAGGCTTTCGAGGGGAACGGTGTCGACACGAG
GTACCTCCTCAAGACGGCAGACGGGATCGCCACGGGCACTGCTCACATCC
TGGTCAATGGTGAAGGCCAAAATATGATCATCGTAATAGCTGGTGCGAAC
GGGCAATTAACACCCGCGGACGTACAGGCAGCAGAAGATGTCATAGCGCA
AGCAGCAGTCTTAATGGTGCAGATGGAAATCCCTACCGAGACGAGTTTTG
AGGCCCTGCGTCTTGCCAAAGCCCATGACGTCTTCAGCATCCTCAACCCG
GCCCCAGCACCGGATGGAAGGCTCAGTCAGGAGTTTCTCGCCTTCGCCTC
CCTCGTCTGCCCCAACGAGACGGAACTTGCCATTCTCACCCAGCTGCCGG
TTGGGACCATTCCTGAGGTCCAAGCGGCAGCTCACAGACTCCGAGAGATG
GGTGCTGCGAGTGTACTCGTTACGCTGGGAGCTCAGGGTGCTTTGTTGAT
GACGGCGGAGAACGCGGCACAGGGTGGTCAGTTAATTCCTTCGAAGCGTG
TTGAGCGAGTGGTGGACACGAGTGGCGCAGGCGATTGTTACATCGGAAGC
TTGGCAGCATTTCTCTCTCGAGGGCAATCACCTTATCCTTATATGTGCGT
TACGTACGATTTAAAGGCGCCTCTCAATGAAGCTGCCACCAAGGCCGGTG
AGATGGCCTCACTAAGTGTCTGCAAGGCGGGGACACAAACATCCTATCCT
TTTGCGAAAGATCTCCCGGCACACTTGCAGCTTCCACAAATAGCTTGA back to top
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