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Properties
| Property Name | Value |
|---|
| TranscriptId | 586662 |
| Track | FilteredModels2 |
| ProteinId | 586576 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:865563..866971 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4111 ID=mRNA_4111|Name=jgi.p|Nanoce1779_2|586576|organism=Nannochloropsis oceanica|type=mRNA|length=1409bp
GGGGGGGTATTCCTGCTCTCGGCGGTGAGTTCGGGAGCTTACAGGAGGGA
AGGCCGTACAACGACAAAGGGGAAGAATACGAAGAGAGAGATGACGACGG
CATGGGGCAGGAAGGAGGACAAAGGAAGCGCTCCGACTCCTTGTCCTCCT
CTTCATCCCGCTCTTCATCCCCACGGGATAGGCACCGTTTTCGGTCTCGG
TCGCGCGAGCATAATCGAGATCGGAGTTCGTCTAGGGATAAACACCGAGG
GCAACGAAGTCAGAGGGGAATGGGGAGGGAAGAACGATGCGCGCGCTCTC
TATCCCCCTCTGAAGAGGAGAAGAGGCAAGGGAGGAGGCAAAGAGAGAGG
GGGCATTCGCGCTCTCGCAGCCGGTCACAGGGGAGAGGAAGAGAGCGAGA
TCAGCAGCGTCGCCGCGATAACAGAGAGAGGAAACATCGCAGTCGGAGCG
GTAGCAAGAATAGGAAGGGCAGGTGGAGGAGCAGGAGTGGCAGTAGGATT
GGCGCAAGGGAACGTGGAGGCGGGGAGGAGGAGAAGAGGAAAGGGAGGGA
TGACTCGCCGGGGGAGCGGTGGAAGAGGAAGGAAAACAGCAGCAGAAACA
GAGGAAGGAGCAGCAGCAGGAGTTCTAGTAGGAATAGAAGCAAGGAAGGA
AATGGCCGGAAGCGACGCCCACAGTCCACGTCTCCTTCCTGCTCCTCGTC
TCCTTCATCTTCTTTTCCTGCTGCTGTCCCCAAGGCACGAGGAAGACGAG
CAGACAATGACAGAAAAGAAAAGAGGCAGGAGGAAGAGGAGGTAAAGAAG
CAGCAGCAGGACGTCGTGCCATCATCAGTAGAGATGTCCTTTACTGCTGC
CCAGGTATGAGGCGGAAGAGGGAGGGAGAGAGGGAGAGTTTGAGGGAAGC
TTTTTGGCCCAAAGCTCGGTGACGGCAGCATTTGATGACCATAGATACCC
AACCTGATCACATTCCTTCCCTTTCCTTTTTGCCCCCTCCCTCTCCTCGG
ACAGCTTGCTGACCGCCTCGTTGAAGTTTACAATGGAAGATCTTCCCGGC
GCTTCGACGCCCTGGCCGACTGTTTCACCCCCGACGTGTCCCTGTGCGTG
CTCAAGACAAATGCCGCAGTCATCCACGGCGCCCAGCCCCTCACTGCCTC
CATGCCCGCCGAATACGCCAAGCAAACTGCCCATGTGACACGGCGTTTGT
TCATCACCACGGACCTCCCAGAGGACGACCCCTCGTTTTCACTTGACTTC
TACCCTGCTGGGCAAGGGCCAGGCATGAATGCCTTTGGGAAAGGCAATGC
TAAAATGGACACGATTTTATTGTTCCAAGCCAACCCGGGGGATACGTGTG
GAAATAAAATAAGTCAGGTGTGGATTGCCCCCGATAGGGAGGGGGTGGCC
TCGAGGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|586576 >mRNA_4111-protein ID=mRNA_4111-protein|Name=jgi.p|Nanoce1779_2|586576|organism=Nannochloropsis oceanica|type=polypeptide|length=253bp
MGQEGGQRKRSDSLSSSSSRSSSPRDRHRFRSRSREHNRDRSSSRDKHRG
QRSQRGMGREERCARSLSPSEEEKRQGRRQRERGHSRSRSRSQGRGRERD
QQRRRDNRERKHRSRSGSKNRKGRWRSRSGSRIGARERGGGEEEKRKGRD
DSPGERWKRKENSSRNRGRSSSRSSSRNRSKEGNGRKRRPQSTSPSCSSS
PSSSFPAAVPKARGRRADNDRKEKRQEEEEVKKQQQDVVPSSVEMSFTAA
QV* back to topmRNA from alignment at scaffold_8:865563..866971+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4111 ID=mRNA_4111|Name=jgi.p|Nanoce1779_2|586576|organism=Nannochloropsis oceanica|type=mRNA|length=1409bp|location=Sequence derived from alignment at scaffold_8:865563..866971+ (Nannochloropsis oceanica)
GGGGGGGTATTCCTGCTCTCGGCGGTGAGTTCGGGAGCTTACAGGAGGGA
AGGCCGTACAACGACAAAGGGGAAGAATACGAAGAGAGAGATGACGACGG
CATGGGGCAGGAAGGAGGACAAAGGAAGCGCTCCGACTCCTTGTCCTCCT
CTTCATCCCGCTCTTCATCCCCACGGGATAGGCACCGTTTTCGGTCTCGG
TCGCGCGAGCATAATCGAGATCGGAGTTCGTCTAGGGATAAACACCGAGG
GCAACGAAGTCAGAGGGGAATGGGGAGGGAAGAACGATGCGCGCGCTCTC
TATCCCCCTCTGAAGAGGAGAAGAGGCAAGGGAGGAGGCAAAGAGAGAGG
GGGCATTCGCGCTCTCGCAGCCGGTCACAGGGGAGAGGAAGAGAGCGAGA
TCAGCAGCGTCGCCGCGATAACAGAGAGAGGAAACATCGCAGTCGGAGCG
GTAGCAAGAATAGGAAGGGCAGGTGGAGGAGCAGGAGTGGCAGTAGGATT
GGCGCAAGGGAACGTGGAGGCGGGGAGGAGGAGAAGAGGAAAGGGAGGGA
TGACTCGCCGGGGGAGCGGTGGAAGAGGAAGGAAAACAGCAGCAGAAACA
GAGGAAGGAGCAGCAGCAGGAGTTCTAGTAGGAATAGAAGCAAGGAAGGA
AATGGCCGGAAGCGACGCCCACAGTCCACGTCTCCTTCCTGCTCCTCGTC
TCCTTCATCTTCTTTTCCTGCTGCTGTCCCCAAGGCACGAGGAAGACGAG
CAGACAATGACAGAAAAGAAAAGAGGCAGGAGGAAGAGGAGGTAAAGAAG
CAGCAGCAGGACGTCGTGCCATCATCAGTAGAGATGTCCTTTACTGCTGC
CCAGGTATGAGGCGGAAGAGGGAGGGAGAGAGGGAGAGTTTGAGGGAAGC
TTTTTGGCCCAAAGCTCGGTGACGGCAGCATTTGATGACCATAGATACCC
AACCTGATCACATTCCTTCCCTTTCCTTTTTGCCCCCTCCCTCTCCTCGG
ACAGCTTGCTGACCGCCTCGTTGAAGTTTACAATGGAAGATCTTCCCGGC
GCTTCGACGCCCTGGCCGACTGTTTCACCCCCGACGTGTCCCTGTGCGTG
CTCAAGACAAATGCCGCAGTCATCCACGGCGCCCAGCCCCTCACTGCCTC
CATGCCCGCCGAATACGCCAAGCAAACTGCCCATGTGACACGGCGTTTGT
TCATCACCACGGACCTCCCAGAGGACGACCCCTCGTTTTCACTTGACTTC
TACCCTGCTGGGCAAGGGCCAGGCATGAATGCCTTTGGGAAAGGCAATGC
TAAAATGGACACGATTTTATTGTTCCAAGCCAACCCGGGGGATACGTGTG
GAAATAAAATAAGTCAGGTGTGGATTGCCCCCGATAGGGAGGGGGTGGCC
TCGAGGGGG back to topCoding sequence (CDS) from alignment at scaffold_8:865563..866971+ >mRNA_4111 ID=mRNA_4111|Name=jgi.p|Nanoce1779_2|586576|organism=Nannochloropsis oceanica|type=CDS|length=759bp|location=Sequence derived from alignment at scaffold_8:865563..866971+ (Nannochloropsis oceanica)
ATGGGGCAGGAAGGAGGACAAAGGAAGCGCTCCGACTCCTTGTCCTCCTC
TTCATCCCGCTCTTCATCCCCACGGGATAGGCACCGTTTTCGGTCTCGGT
CGCGCGAGCATAATCGAGATCGGAGTTCGTCTAGGGATAAACACCGAGGG
CAACGAAGTCAGAGGGGAATGGGGAGGGAAGAACGATGCGCGCGCTCTCT
ATCCCCCTCTGAAGAGGAGAAGAGGCAAGGGAGGAGGCAAAGAGAGAGGG
GGCATTCGCGCTCTCGCAGCCGGTCACAGGGGAGAGGAAGAGAGCGAGAT
CAGCAGCGTCGCCGCGATAACAGAGAGAGGAAACATCGCAGTCGGAGCGG
TAGCAAGAATAGGAAGGGCAGGTGGAGGAGCAGGAGTGGCAGTAGGATTG
GCGCAAGGGAACGTGGAGGCGGGGAGGAGGAGAAGAGGAAAGGGAGGGAT
GACTCGCCGGGGGAGCGGTGGAAGAGGAAGGAAAACAGCAGCAGAAACAG
AGGAAGGAGCAGCAGCAGGAGTTCTAGTAGGAATAGAAGCAAGGAAGGAA
ATGGCCGGAAGCGACGCCCACAGTCCACGTCTCCTTCCTGCTCCTCGTCT
CCTTCATCTTCTTTTCCTGCTGCTGTCCCCAAGGCACGAGGAAGACGAGC
AGACAATGACAGAAAAGAAAAGAGGCAGGAGGAAGAGGAGGTAAAGAAGC
AGCAGCAGGACGTCGTGCCATCATCAGTAGAGATGTCCTTTACTGCTGCC
CAGGTATGA back to top
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