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Properties
Property Name | Value |
TranscriptId | 597476 |
Track | FilteredModels2 |
ProteinId | 597390 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:191546..193125 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6579 ID=mRNA_6579|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=mRNA|length=1580bp AGCAGGAGGAGGAGAAGAAGAAGGAGGGGGGGGAGCGGCAGCAGAAGCGC CTGCAGCGGCAGCACATTCAGGGGCTGGGCGACGGACCCGTCAAATCCAG GGAGCAGCAGCAGCAGCAGCAGCAGGAGGAGCAGCGGCAAATGCAGTAGG AGAGGAAGATTTGGAAGAGGTTGAGGACACGACCAAAGGGCAGGCTGGTG GGACGGAAGCCGCGTATAAACGCAAACAATCCGAATGGATCGCCCGTGCC TTAAGGTCGGAAAAAGATCCGCGCGTCTGCATGGCCTTGGAAACGCTGCA ATCTCTTAACCACGCCATTGCCCAGAGCAAGGCCTCCTACGAACACGACG TATTAAAACTCCAACAACGTCGGGCGTTGCGTGACGCTGGGGCAGCGGAA GTGCTCTCTCCGTTGCTGCAAGAGGGGAAGGATACGGTGCGAAAAATGGA GGAGCAAGAGAGGGGTATGTCGGAGGATGTTCAAAGTTGCTTAATGATGG TTGTGGAGAGCTTGGGGGAGAAAGCTATTATTCTAAATGAACACCATCGC TTGGCACGTCTGCAGAAGGTGGTGGCTGCGAGGGTGAGGAACTTCCGCAC CCGTGTGGCGGAAAAGGGGGCGATGGCCCTGGAGGAGGAAAAGGCGAGGG CAGGGAAGGAGGTGGAAGTAGAGGGGGAGAGATTAAAGGAGGAATTGGCG GGAATTGAGGAGGAGATTAAGGATCTGAATGAACATTTTGCACGAGAAAG GCCACGGATGGAGCAGAAGTTGAGGGTATTGCAGGCGGCATTGGAGAGAA GGAAGGAGGGGTTGAGTAGGGAGAAGAGACGGTATCGCCTTGATAAAGAG GGATGGGAGAATGAAGCGAGGCTCTTGGCGGCTTCGGTAATGAAAGCGAC GAAACTGGAGGAGAAGCTAAATGTGGAAAAGAGGGCAGCTGCTAAGGAGG CGATAAGAGAGCGGGCGGAGGTGGAGAAGGAAGAGGAGGATGAGGAGAAG GAGATACGTGGGGCAGAGGAGAGTGAAGGGAGGGTAGAAGGGGGCGAAGA GGACGAGGAGGAAGATGACGAAAACTTGGAGGAATTGGCGGATTTGATGT TTCAGCTGGAGTTGCTCATGTCCAAGGAGGGACACTTGGAGGAATAGGAG GAGGGCTTGGAGTGAGGAGGAAAAAATGATGAAGAGAGAAATAGCGTTTG TATGTGCGTATAAATGTCTGTGCCCATAGTTGATTAAAAAAAGGCTACTC AGCAAGACCGCAAGAAGAAGCATGTAATGGCCAAGACAAAATAAACTGGG AAGGCAAAAATCATCTCTATCTGTTATTTGACTTTCAAGTTTTCATATGC TGTTCAGTGTATGAGTTGGTCGGCTCGTTACCATATCATTATCGGCAATT TAATATGCATGCACAGACACGAATAAAGTAACACTTTCTTAATCTGCCTT TACAAATCTTTTTCCTCCTCGTTTTCTTCTTCCTCCTTCTCCTCCTCCTT CTCCTTCTCCTCGTCGTCGTCCTCCTCCCCTTTCTCCCCCCCCCACTTTC TCCTCCTTCTCCCCCCCCACCTTCCTCATT back to topprotein sequence of jgi.p|Nanoce1779_2|597390 >mRNA_6579-protein ID=mRNA_6579-protein|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=polypeptide|length=289bp MALETLQSLNHAIAQSKASYEHDVLKLQQRRALRDAGAAEVLSPLLQEGK DTVRKMEEQERGMSEDVQSCLMMVVESLGEKAIILNEHHRLARLQKVVAA RVRNFRTRVAEKGAMALEEEKARAGKEVEVEGERLKEELAGIEEEIKDLN EHFARERPRMEQKLRVLQAALERRKEGLSREKRRYRLDKEGWENEARLLA ASVMKATKLEEKLNVEKRAAAKEAIRERAEVEKEEEDEEKEIRGAEESEG RVEGGEEDEEEDDENLEELADLMFQLELLMSKEGHLEE* back to topmRNA from alignment at scaffold_18:191546..193125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6579 ID=mRNA_6579|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=mRNA|length=1580bp|location=Sequence derived from alignment at scaffold_18:191546..193125- (Nannochloropsis oceanica) AGCAGGAGGAGGAGAAGAAGAAGGAGGGGGGGGAGCGGCAGCAGAAGCGC
CTGCAGCGGCAGCACATTCAGGGGCTGGGCGACGGACCCGTCAAATCCAG
GGAGCAGCAGCAGCAGCAGCAGCAGGAGGAGCAGCGGCAAATGCAGTAGG
AGAGGAAGATTTGGAAGAGGTTGAGGACACGACCAAAGGGCAGGCTGGTG
GGACGGAAGCCGCGTATAAACGCAAACAATCCGAATGGATCGCCCGTGCC
TTAAGGTCGGAAAAAGATCCGCGCGTCTGCATGGCCTTGGAAACGCTGCA
ATCTCTTAACCACGCCATTGCCCAGAGCAAGGCCTCCTACGAACACGACG
TATTAAAACTCCAACAACGTCGGGCGTTGCGTGACGCTGGGGCAGCGGAA
GTGCTCTCTCCGTTGCTGCAAGAGGGGAAGGATACGGTGCGAAAAATGGA
GGAGCAAGAGAGGGGTATGTCGGAGGATGTTCAAAGTTGCTTAATGATGG
TTGTGGAGAGCTTGGGGGAGAAAGCTATTATTCTAAATGAACACCATCGC
TTGGCACGTCTGCAGAAGGTGGTGGCTGCGAGGGTGAGGAACTTCCGCAC
CCGTGTGGCGGAAAAGGGGGCGATGGCCCTGGAGGAGGAAAAGGCGAGGG
CAGGGAAGGAGGTGGAAGTAGAGGGGGAGAGATTAAAGGAGGAATTGGCG
GGAATTGAGGAGGAGATTAAGGATCTGAATGAACATTTTGCACGAGAAAG
GCCACGGATGGAGCAGAAGTTGAGGGTATTGCAGGCGGCATTGGAGAGAA
GGAAGGAGGGGTTGAGTAGGGAGAAGAGACGGTATCGCCTTGATAAAGAG
GGATGGGAGAATGAAGCGAGGCTCTTGGCGGCTTCGGTAATGAAAGCGAC
GAAACTGGAGGAGAAGCTAAATGTGGAAAAGAGGGCAGCTGCTAAGGAGG
CGATAAGAGAGCGGGCGGAGGTGGAGAAGGAAGAGGAGGATGAGGAGAAG
GAGATACGTGGGGCAGAGGAGAGTGAAGGGAGGGTAGAAGGGGGCGAAGA
GGACGAGGAGGAAGATGACGAAAACTTGGAGGAATTGGCGGATTTGATGT
TTCAGCTGGAGTTGCTCATGTCCAAGGAGGGACACTTGGAGGAATAGGAG
GAGGGCTTGGAGTGAGGAGGAAAAAATGATGAAGAGAGAAATAGCGTTTG
TATGTGCGTATAAATGTCTGTGCCCATAGTTGATTAAAAAAAGGCTACTC
AGCAAGACCGCAAGAAGAAGCATGTAATGGCCAAGACAAAATAAACTGGG
AAGGCAAAAATCATCTCTATCTGTTATTTGACTTTCAAGTTTTCATATGC
TGTTCAGTGTATGAGTTGGTCGGCTCGTTACCATATCATTATCGGCAATT
TAATATGCATGCACAGACACGAATAAAGTAACACTTTCTTAATCTGCCTT
TACAAATCTTTTTCCTCCTCGTTTTCTTCTTCCTCCTTCTCCTCCTCCTT
CTCCTTCTCCTCGTCGTCGTCCTCCTCCCCTTTCTCCCCCCCCCACTTTC
TCCTCCTTCTCCCCCCCCACCTTCCTCATT back to topCoding sequence (CDS) from alignment at scaffold_18:191546..193125- >mRNA_6579 ID=mRNA_6579|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=CDS|length=867bp|location=Sequence derived from alignment at scaffold_18:191546..193125- (Nannochloropsis oceanica) ATGGCCTTGGAAACGCTGCAATCTCTTAACCACGCCATTGCCCAGAGCAA GGCCTCCTACGAACACGACGTATTAAAACTCCAACAACGTCGGGCGTTGC GTGACGCTGGGGCAGCGGAAGTGCTCTCTCCGTTGCTGCAAGAGGGGAAG GATACGGTGCGAAAAATGGAGGAGCAAGAGAGGGGTATGTCGGAGGATGT TCAAAGTTGCTTAATGATGGTTGTGGAGAGCTTGGGGGAGAAAGCTATTA TTCTAAATGAACACCATCGCTTGGCACGTCTGCAGAAGGTGGTGGCTGCG AGGGTGAGGAACTTCCGCACCCGTGTGGCGGAAAAGGGGGCGATGGCCCT GGAGGAGGAAAAGGCGAGGGCAGGGAAGGAGGTGGAAGTAGAGGGGGAGA GATTAAAGGAGGAATTGGCGGGAATTGAGGAGGAGATTAAGGATCTGAAT GAACATTTTGCACGAGAAAGGCCACGGATGGAGCAGAAGTTGAGGGTATT GCAGGCGGCATTGGAGAGAAGGAAGGAGGGGTTGAGTAGGGAGAAGAGAC GGTATCGCCTTGATAAAGAGGGATGGGAGAATGAAGCGAGGCTCTTGGCG GCTTCGGTAATGAAAGCGACGAAACTGGAGGAGAAGCTAAATGTGGAAAA GAGGGCAGCTGCTAAGGAGGCGATAAGAGAGCGGGCGGAGGTGGAGAAGG AAGAGGAGGATGAGGAGAAGGAGATACGTGGGGCAGAGGAGAGTGAAGGG AGGGTAGAAGGGGGCGAAGAGGACGAGGAGGAAGATGACGAAAACTTGGA GGAATTGGCGGATTTGATGTTTCAGCTGGAGTTGCTCATGTCCAAGGAGG GACACTTGGAGGAATAG back to top
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