jgi.p|Nanoce1779_2|559605, gene_8116 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|559605
Unique Namegene_8116
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:198218..203304 -

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Properties
Property NameValue
TranscriptId559691
ProteinId559605
Product nameTrehalase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:198218..203304 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004555alpha,alpha-trehalase activity
Vocabulary: Biological Process
TermDefinition
GO:0005991trehalose metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01580NO21G01580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559605mRNA_8116-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559605mRNA_8116Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|559605

>mRNA_8116-protein ID=mRNA_8116-protein|Name=jgi.p|Nanoce1779_2|559605|organism=Nannochloropsis oceanica|type=polypeptide|length=791bp
MMRWTRGPAAFVLALNTRQYRGATTFFFATKHSCPMSSFFQTGSARGSCH
SFSSSLHPTLKRASVSRPLDEELGDSSHQQNQQQDTIPQQLPPHGTTTMA
SVHVDAFHVASPPCSPRGGFAGGGPTSPQKMNDLVVEAEHPSSSVTAASV
MMRMANSDCVSTPDEARAATTAAAAAPGAASAVAASVVKVPTLMGANDDE
DALAHVARAAKVYCQGELLHIVQTAGIFEDSKEFVDMPMRVDPEVVLEQF
HALAPSLRRDPTVLKAFLAQYFSAPGSDLVPHVPTDHTDSPPLLEGLAGH
APYQRWASDLNDFWKQLCRKVSPDVDLNPQRYSILKRTHPVVIPGGRFRE
SYYWDSYWIVLGLLACDMKETARGLVQNLLDDVANFGFVPNGGRIYYLNR
SQPPLLSEMVLALVKHDPVGIDRHFVSSALAVLEKEYEFWMNDGERAITF
SSLPSSIDGDAHGSSSPPTPCRKHQPHHPQHVLNRYWTASNHPRPESFKE
DLHHAGLADCAQGFYANIAAGAESGWDFSSRWIAPCEKGEYALERIATTT
IVPVDLNTFLYRMERNLARLHDFSWVSSKAQMFADASTRRALAMDHLLWD
NHKGMWRDLTGCTFALEFAKVLPASNFLPLWGRVLDNPALASVASSRKLA
ALEGLGMSGLITKGGLQTTDTETKEQWDAPNAWSPIVHMIIEGLENLQAG
DSGRLAISLAKAWLESNYLGWANTGYMYEKYNGGVPGARGEGGEYYPQVG
FGWTNGVVLHLLKVYGGKISEKMEPEMSNASSSSTTTSSP*
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Synonyms
Publications