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Properties
| Property Name | Value |
|---|
| TranscriptId | 584125 |
| Track | FilteredModels2 |
| ProteinId | 584039 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:379227..381385 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2974 ID=mRNA_2974|Name=jgi.p|Nanoce1779_2|584039|organism=Nannochloropsis oceanica|type=mRNA|length=2036bp
AGTCTCGAATTTAAAATGCCTGAGTATCGGCTCCAAGCGGTCGTCGTCGC
AATCGGGGTCTTCGTCTCTCTGTGCCTCTCTACATACGCCATCGTGCCCA
TTCACGTTCAACAGTCTTGTTCGTCCTTCATCAAGCCCATTTCGCGTTTA
CCCAACCCTACTGCCACAAAGCAATTGGCACAAAGATACTATACGCCCCT
TTTTGCCTCGGCCATGGCCATCACGCCCCACGAAAATATGGCCTGCAAGC
TCGAAACCTCCCTCTTGTCCGCTTCACCCAATTTTGTCCGCTTCACCCTT
ACGAACAACCCCGCCCCACCCAAGGACGCCAGCAACCCCGTCATTGAAAA
GCTACAAGCCAGACTCGTGACCAGTGGAAGCGATAAATCCAAGCCTCCAA
CATTCCAAATAGTCTATACGCACCCGACTTCCACCACCACCAAGAATTAT
GCGCTTACCGACGCACCTGCTGTCCTTCGAGGGCATTTGGCCTCGACTGG
ACCGCTCAAGGCAGCGCGGCTTTTCACCACCGCAGAGGACTGGGTTTTGG
AGGTGAGGAAAAACACGGGTAGAGCACGCTTGTACAGAAATAAGGCAACA
TTTGCTGAAGTCGAGGTGGGGACGCATGACCGACAAAAGAAGCGGCGCTT
GGCATTAGTGTCCCTCACGGAGGAAGAGAAAGAAGGTGGGAAGGAGGAAG
GAAATGGAGACGGAAAGGAAATGGGCGAGGCAGCACGTGTGATGTTATCA
TCGTCTATCTCGATGACCAAGAACAGTTTTTTGCACGAGTATGGAATTTT
GGGGCCCGGAGGAAGGCCGAAGGCCGGAATGAAGGACAAGTTCAGACAAA
TTGAAAAGTTTGTGGAAATCCTTGCCTCGCAGCTCAAGGAGGGAAGCGAC
AATGAGAGCACTGCTATGTCTGCAGCAGACCTGCAGAAAAAGACTCTGAA
ATTGTTGGACGCGGGGTGTGGAAAGGGATATTTGACGTTTGCTGCTTATG
AGTATTTGACCTCGCAAGGGTATCGAGTTCAAGCACGAGGGGTGGACGTG
ACGCAAGACGTGGTTGACAAGGCCAACGCCGTGGCGGATCGACTAGGATA
CAGTTCTGGGGGAGGCTTGAGCTTCTCGCGGGGGACGATCGCAGAGGCCA
CGGCGAAGGTGACAGCTGGGCAAGAGAGATATGACGTGGTGATAGCGCTG
CATGCCTGTGACACAGCCACAGATGATTGTCTTTACTTGGGGGTTCAGAC
GGAAGCGAGGGTCATTTTGGCAAGCCCTTGTTGCCACAAGGAAGTGAGGA
GGGAGATGAAGAAGGCGAAGCTGACGGCTGCGGCGGCAGAGCCGTTGCAG
CCTGTGTTGAAGCATGGGATTTTAATGGAGCGGCAGGCGGAGATTGTGAC
AGACAGCATCCGCGTGCTGGCCCTGCAGCTGTCGGGATACCGGGCGCAAG
TATTTGAGTGGATCAATGACGAGGAGACGAGCAAGAACCTCATGCTTGCT
GCCACTAAAAGGCAACGGCCATTGGAGGCAAAGAAGTTGCGAGCGTTTCA
AGGTCAGTTGCGAGAACTGATGAACATGTTTGGTTTGGACACGCAACATT
TGCTAGGATTGCTTGGAGCGGGACTGGAGGAAGAGAAGGAGTAAATGACT
TTTTGACGAAAGTAAAAATAAAATGTGTCAAAATTTTATGCCAATACAGA
GATCTGTATTATTAAACGGCCACTTTAATCAAACATAATAGAGGTGCGTG
ACCAACTGCGAGGGGATGGACTTTTTTGGTTGAATTTGCTTTGATTGACC
AAGCAACCCCTGGAGGGGGGCTGGAATGTGGAGGTAGAAATTTGGTATTG
TCACGGATCGTTTGTGTGGGCAGAGCTTTAAGATAAAGGTGTATGTCGGT
AGGCAACCATTTGGAAAATATTAACATATGAACATATGTGTTACTCAGAT
CGAGTCGCCTCCGTGACGTACATCTCATGTGACGTCCGCGAGTCGCACGG
CGAATCTGTCTCAGATTAGTAGCCAGCTGTCCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|584039 >mRNA_2974-protein ID=mRNA_2974-protein|Name=jgi.p|Nanoce1779_2|584039|organism=Nannochloropsis oceanica|type=polypeptide|length=543bp
MPEYRLQAVVVAIGVFVSLCLSTYAIVPIHVQQSCSSFIKPISRLPNPTA
TKQLAQRYYTPLFASAMAITPHENMACKLETSLLSASPNFVRFTLTNNPA
PPKDASNPVIEKLQARLVTSGSDKSKPPTFQIVYTHPTSTTTKNYALTDA
PAVLRGHLASTGPLKAARLFTTAEDWVLEVRKNTGRARLYRNKATFAEVE
VGTHDRQKKRRLALVSLTEEEKEGGKEEGNGDGKEMGEAARVMLSSSISM
TKNSFLHEYGILGPGGRPKAGMKDKFRQIEKFVEILASQLKEGSDNESTA
MSAADLQKKTLKLLDAGCGKGYLTFAAYEYLTSQGYRVQARGVDVTQDVV
DKANAVADRLGYSSGGGLSFSRGTIAEATAKVTAGQERYDVVIALHACDT
ATDDCLYLGVQTEARVILASPCCHKEVRREMKKAKLTAAAAEPLQPVLKH
GILMERQAEIVTDSIRVLALQLSGYRAQVFEWINDEETSKNLMLAATKRQ
RPLEAKKLRAFQGQLRELMNMFGLDTQHLLGLLGAGLEEEKE* back to topmRNA from alignment at scaffold_7:379227..381385- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2974 ID=mRNA_2974|Name=jgi.p|Nanoce1779_2|584039|organism=Nannochloropsis oceanica|type=mRNA|length=2159bp|location=Sequence derived from alignment at scaffold_7:379227..381385- (Nannochloropsis oceanica)
AGTCTCGAATTTAAAATGCCTGAGTATCGGCTCCAAGCGGTCGTCGTCGC
AATCGGGGTCTTCGTCTCTCTGTGCCTCTCTACATACGCCATCGTGCCCA
TTCACGTTCAACAGTCTTGTTCGTCCTTCATCAAGCCCATTTCGCGTTTA
CCCAACCCTACTGCCACAAAGCAATTGGCACAAAGATACTATACGCCCCT
TTTTGCCTCGGCCATGGCCATCACGCCCCACGAAAATATGGCCTGCAAGC
TCGAAACCTCCCTCTTGTCCGCTTCACCCAATTTTGTCCGCTTCACCCTT
ACGAACAACCCCGCCCCACCCAAGGACGCCAGCAACCCCGTCATTGAAAA
GCTACAAGCCAGACTCGTGACCAGTGGAAGCGATAAATCCAAGCCTCCAA
CATTCCAAATAGTCTATACGCACCCGACTTCCACCACCACCAAGAATTAT
GCGCTTACCGACGCACCTGCTGTCCTTCGAGGGCATTTGGCCTCGACTGG
ACCGCTCAAGGCAGCGCGGCTTTTCACCACCGCAGAGGACTGGGTTTTGG
AGGTGAGGAAAAACACGGGTAGAGCACGCTTGTACAGAAATAAGGCAACA
TTTGCTGAAGTCGAGGTGGGGACGCATGACCGACAAAAGAAGCGGCGCTT
GGCATTAGTGTCCCTCACGGAGGAAGAGAAAGAAGGTGGGAAGGAGGAAG
GAAATGGAGACGGAAAGGAAATGGGCGAGGCAGCACGTGTGATGTTATCA
TCGTCTATCTCGATGACCAAGAACAGTTTTTTGCACGAGTATGGAATTTT
GGGGCCCGGAGGAAGGCCGAAGGCCGGAATGAAGGACAAGTTCAGACAAA
TTGAAAAGTTTGTGGAAATCCTTGCCTCGCAGCTCAAGGAGGGAAGCGAC
AATGAGAGCACTGCTATGTCTGCAGCAGACCTGCAGAAAAAGACTCTGAA
ATTGTTGGACGCGGGGTGTGGAAAGGGATATTTGACGTTTGCTGCTTATG
AGTATTTGACCTCGCAAGGGTATCGAGTTCAAGCACGAGGGGTGGACGTG
ACGCAAGACGTGGTTGACAAGGCCAACGCCGTGGCGGATCGACTAGGATA
CAGTTCTGGGGGAGGCTTGAGCTTCTCGCGGGGGACGATCGCAGAGGCCA
CGGCGAAGGTGACAGCTGGGCAAGAGAGATATGACGTGGTGATAGCGCTG
CATGCCTGTGACACAGCCACAGATGATTGTCTTTACTTGGGGGTTCAGAC
GGAAGCGAGGGTCATTTTGGCAAGCCCTTGTTGCCACAAGGAAGTGAGGA
GGGAGATGAAGAAGGCGAAGCTGACGGCTGCGGCGGCAGAGCCGTTGCAG
CCTGTGTTGAAGCATGGGATTTTAATGGAGCGGCAGGCGGAGATTGTGAC
AGACAGGTATGTTTCGTCAGTGTGAGAGGGAATTGAGAGAAGGCGATAAG
GCGGTTGGTAAATGGGTGGACGAGAAAATGAAAATATGCACACATATTTA
TTCACGATCTTCGTTTCCGTTAAATACAGCATCCGCGTGCTGGCCCTGCA
GCTGTCGGGATACCGGGCGCAAGTATTTGAGTGGATCAATGACGAGGAGA
CGAGCAAGAACCTCATGCTTGCTGCCACTAAAAGGCAACGGCCATTGGAG
GCAAAGAAGTTGCGAGCGTTTCAAGGTCAGTTGCGAGAACTGATGAACAT
GTTTGGTTTGGACACGCAACATTTGCTAGGATTGCTTGGAGCGGGACTGG
AGGAAGAGAAGGAGTAAATGACTTTTTGACGAAAGTAAAAATAAAATGTG
TCAAAATTTTATGCCAATACAGAGATCTGTATTATTAAACGGCCACTTTA
ATCAAACATAATAGAGGTGCGTGACCAACTGCGAGGGGATGGACTTTTTT
GGTTGAATTTGCTTTGATTGACCAAGCAACCCCTGGAGGGGGGCTGGAAT
GTGGAGGTAGAAATTTGGTATTGTCACGGATCGTTTGTGTGGGCAGAGCT
TTAAGATAAAGGTGTATGTCGGTAGGCAACCATTTGGAAAATATTAACAT
ATGAACATATGTGTTACTCAGATCGAGTCGCCTCCGTGACGTACATCTCA
TGTGACGTCCGCGAGTCGCACGGCGAATCTGTCTCAGATTAGTAGCCAGC
TGTCCCCCC back to topCoding sequence (CDS) from alignment at scaffold_7:379227..381385- >mRNA_2974 ID=mRNA_2974|Name=jgi.p|Nanoce1779_2|584039|organism=Nannochloropsis oceanica|type=CDS|length=3258bp|location=Sequence derived from alignment at scaffold_7:379227..381385- (Nannochloropsis oceanica)
CATCCGCGTGCTGGCCCTGCAGCTGTCGGGATACCGGGCGCAAGTATTTG
AGTGGATCAATGACGAGGAGACGAGCAAGAACCTCATGCTTGCTGCCACT
AAAAGGCAACGGCCATTGGAGGCAAAGAAGTTGCGAGCGTTTCAAGGTCA
GTTGCGAGAACTGATGAACATGTTTGGTTTGGACACGCAACATTTGCTAG
GATTGCTTGGAGCGGGACTGGAGGAAGAGAAGGAGTAAATGCCTGAGTAT
CGGCTCCAAGCGGTCGTCGTCGCAATCGGGGTCTTCGTCTCTCTGTGCCT
CTCTACATACGCCATCGTGCCCATTCACGTTCAACAGTCTTGTTCGTCCT
TCATCAAGCCCATTTCGCGTTTACCCAACCCTACTGCCACAAAGCAATTG
GCACAAAGATACTATACGCCCCTTTTTGCCTCGGCCATGGCCATCACGCC
CCACGAAAATATGGCCTGCAAGCTCGAAACCTCCCTCTTGTCCGCTTCAC
CCAATTTTGTCCGCTTCACCCTTACGAACAACCCCGCCCCACCCAAGGAC
GCCAGCAACCCCGTCATTGAAAAGCTACAAGCCAGACTCGTGACCAGTGG
AAGCGATAAATCCAAGCCTCCAACATTCCAAATAGTCTATACGCACCCGA
CTTCCACCACCACCAAGAATTATGCGCTTACCGACGCACCTGCTGTCCTT
CGAGGGCATTTGGCCTCGACTGGACCGCTCAAGGCAGCGCGGCTTTTCAC
CACCGCAGAGGACTGGGTTTTGGAGGTGAGGAAAAACACGGGTAGAGCAC
GCTTGTACAGAAATAAGGCAACATTTGCTGAAGTCGAGGTGGGGACGCAT
GACCGACAAAAGAAGCGGCGCTTGGCATTAGTGTCCCTCACGGAGGAAGA
GAAAGAAGGTGGGAAGGAGGAAGGAAATGGAGACGGAAAGGAAATGGGCG
AGGCAGCACGTGTGATGTTATCATCGTCTATCTCGATGACCAAGAACAGT
TTTTTGCACGAGTATGGAATTTTGGGGCCCGGAGGAAGGCCGAAGGCCGG
AATGAAGGACAAGTTCAGACAAATTGAAAAGTTTGTGGAAATCCTTGCCT
CGCAGCTCAAGGAGGGAAGCGACAATGAGAGCACTGCTATGTCTGCAGCA
GACCTGCAGAAAAAGACTCTGAAATTGTTGGACGCGGGGTGTGGAAAGGG
ATATTTGACGTTTGCTGCTTATGAGTATTTGACCTCGCAAGGGTATCGAG
TTCAAGCACGAGGGGTGGACGTGACGCAAGACGTGGTTGACAAGGCCAAC
GCCGTGGCGGATCGACTAGGATACAGTTCTGGGGGAGGCTTGAGCTTCTC
GCGGGGGACGATCGCAGAGGCCACGGCGAAGGTGACAGCTGGGCAAGAGA
GATATGACGTGGTGATAGCGCTGCATGCCTGTGACACAGCCACAGATGAT
TGTCTTTACTTGGGGGTTCAGACGGAAGCGAGGGTCATTTTGGCAAGCCC
TTGTTGCCACAAGGAAGTGAGGAGGGAGATGAAGAAGGCGAAGCTGACGG
CTGCGGCGGCAGAGCCGTTGCAGCCTGTGTTGAAGCATGGGATTTTAATG
GAGCGGCAGGCGGAGATTGTGACAGACAGCATCCGCGTGCTGGCCCTGCA
GCTGTCGGGATACCGGGCGCAAGTATTTGAGTGGATCAATGACGAGGAGA
CGAGCAAGAACCTCATGCTTGCTGCCACTAAAAGGCAACGGCCATTGGAG
GCAAAGAAGTTGCGAGCGTTTCAAGGTCAGTTGCGAGAACTGATGAACAT
GTTTGGTTTGGACACGCAACATTTGCTAGGATTGCTTGGAGCGGGACTGG
AGGAAGAGAAGGAGTAAATGCCTGAGTATCGGCTCCAAGCGGTCGTCGTC
GCAATCGGGGTCTTCGTCTCTCTGTGCCTCTCTACATACGCCATCGTGCC
CATTCACGTTCAACAGTCTTGTTCGTCCTTCATCAAGCCCATTTCGCGTT
TACCCAACCCTACTGCCACAAAGCAATTGGCACAAAGATACTATACGCCC
CTTTTTGCCTCGGCCATGGCCATCACGCCCCACGAAAATATGGCCTGCAA
GCTCGAAACCTCCCTCTTGTCCGCTTCACCCAATTTTGTCCGCTTCACCC
TTACGAACAACCCCGCCCCACCCAAGGACGCCAGCAACCCCGTCATTGAA
AAGCTACAAGCCAGACTCGTGACCAGTGGAAGCGATAAATCCAAGCCTCC
AACATTCCAAATAGTCTATACGCACCCGACTTCCACCACCACCAAGAATT
ATGCGCTTACCGACGCACCTGCTGTCCTTCGAGGGCATTTGGCCTCGACT
GGACCGCTCAAGGCAGCGCGGCTTTTCACCACCGCAGAGGACTGGGTTTT
GGAGGTGAGGAAAAACACGGGTAGAGCACGCTTGTACAGAAATAAGGCAA
CATTTGCTGAAGTCGAGGTGGGGACGCATGACCGACAAAAGAAGCGGCGC
TTGGCATTAGTGTCCCTCACGGAGGAAGAGAAAGAAGGTGGGAAGGAGGA
AGGAAATGGAGACGGAAAGGAAATGGGCGAGGCAGCACGTGTGATGTTAT
CATCGTCTATCTCGATGACCAAGAACAGTTTTTTGCACGAGTATGGAATT
TTGGGGCCCGGAGGAAGGCCGAAGGCCGGAATGAAGGACAAGTTCAGACA
AATTGAAAAGTTTGTGGAAATCCTTGCCTCGCAGCTCAAGGAGGGAAGCG
ACAATGAGAGCACTGCTATGTCTGCAGCAGACCTGCAGAAAAAGACTCTG
AAATTGTTGGACGCGGGGTGTGGAAAGGGATATTTGACGTTTGCTGCTTA
TGAGTATTTGACCTCGCAAGGGTATCGAGTTCAAGCACGAGGGGTGGACG
TGACGCAAGACGTGGTTGACAAGGCCAACGCCGTGGCGGATCGACTAGGA
TACAGTTCTGGGGGAGGCTTGAGCTTCTCGCGGGGGACGATCGCAGAGGC
CACGGCGAAGGTGACAGCTGGGCAAGAGAGATATGACGTGGTGATAGCGC
TGCATGCCTGTGACACAGCCACAGATGATTGTCTTTACTTGGGGGTTCAG
ACGGAAGCGAGGGTCATTTTGGCAAGCCCTTGTTGCCACAAGGAAGTGAG
GAGGGAGATGAAGAAGGCGAAGCTGACGGCTGCGGCGGCAGAGCCGTTGC
AGCCTGTGTTGAAGCATGGGATTTTAATGGAGCGGCAGGCGGAGATTGTG
ACAGACAG back to top
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