Properties
| Property Name | Value |
|---|
| TranscriptId | 590599 |
| Track | FilteredModels2 |
| ProteinId | 590513 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_11 | supercontig | scaffold_11:706837..707671 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5841 ID=mRNA_5841|Name=jgi.p|Nanoce1779_2|590513|organism=Nannochloropsis oceanica|type=mRNA|length=835bp
GGAGGGAGGAGGGGCATGAAGCGCGAAGGAGGGAGGGGGAGGGGAATGAG
GAGAAGGAGGAGGAGGGGGATGAGGAGGAGGAGGAGGAGGAGGGGGATGA
GGGGGATGAGGAGACGTGGGCGGTGTTGCTATTATCTTTGCTTTCAAGAG
ATGAGGGAGAAAAGGAGGAGAGGGAAGAGGATAAGGAGGGGGAAGATGAG
GAGGTAAGTGCTTGGCTACTGGTTGCGTTGCAATGGTTGAGGGCATTGAC
GACGAAGATGACGAAGAGAAAGGGAGGACGGGAGGATGACAAGAAGAAAG
AGGATGAGGATAAGAAGGAGAAGATGAAGAAGAAGAAAGAGAAGGAGAAG
AAGAAGGAGGAGGAGGGCGAGGAGGAGGTAGAAGGAGCGAGTTTTCTAAA
AGAGCTCTCTGAGGCTTTGACGCTGGCAAGGACGAATGAATGGAAGATGA
AGGAGGGAATGATGAGAAGAGTGGTCGATATTGTGGGGGCTGCCGTCCGG
ACAATGCTGCTACGTCAGTGCCTCGGTACAACGGGTGGGAGGGAGGAAGG
AAAGGACGGAGGGAGATGGAAAGCGGGGACACTGGAGGCGTTAAAGGAGG
TACTAGCCTCTCTTCCCTTTTCGTCTGGAGTAGAAATGGCAGGCAAAGAG
AAGAAGCGAAAAGGAATAGAGATAGAAGCGGAGGAAGAACCGACCAATAG
GCGACGACCTAAGAAGCAGCAGCAGAAGCAGCAGCAATAGTAGCTGTAGC
CGACGAGAAACGTGCGGAAAAGCCGTGGCAATGCTGGGAAGTCGAAGGGA
GAAGGGATTAGAAAAAGTGTGAATGTAAATAAAAG back to topprotein sequence of jgi.p|Nanoce1779_2|590513 >mRNA_5841-protein ID=mRNA_5841-protein|Name=jgi.p|Nanoce1779_2|590513|organism=Nannochloropsis oceanica|type=polypeptide|length=161bp
MTKRKGGREDDKKKEDEDKKEKMKKKKEKEKKKEEEGEEEVEGASFLKEL
SEALTLARTNEWKMKEGMMRRVVDIVGAAVRTMLLRQCLGTTGGREEGKD
GGRWKAGTLEALKEVLASLPFSSGVEMAGKEKKRKGIEIEAEEEPTNRRR
PKKQQQKQQQ* back to topmRNA from alignment at scaffold_11:706837..707671- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5841 ID=mRNA_5841|Name=jgi.p|Nanoce1779_2|590513|organism=Nannochloropsis oceanica|type=mRNA|length=835bp|location=Sequence derived from alignment at scaffold_11:706837..707671- (Nannochloropsis oceanica)
GGAGGGAGGAGGGGCATGAAGCGCGAAGGAGGGAGGGGGAGGGGAATGAG
GAGAAGGAGGAGGAGGGGGATGAGGAGGAGGAGGAGGAGGAGGGGGATGA
GGGGGATGAGGAGACGTGGGCGGTGTTGCTATTATCTTTGCTTTCAAGAG
ATGAGGGAGAAAAGGAGGAGAGGGAAGAGGATAAGGAGGGGGAAGATGAG
GAGGTAAGTGCTTGGCTACTGGTTGCGTTGCAATGGTTGAGGGCATTGAC
GACGAAGATGACGAAGAGAAAGGGAGGACGGGAGGATGACAAGAAGAAAG
AGGATGAGGATAAGAAGGAGAAGATGAAGAAGAAGAAAGAGAAGGAGAAG
AAGAAGGAGGAGGAGGGCGAGGAGGAGGTAGAAGGAGCGAGTTTTCTAAA
AGAGCTCTCTGAGGCTTTGACGCTGGCAAGGACGAATGAATGGAAGATGA
AGGAGGGAATGATGAGAAGAGTGGTCGATATTGTGGGGGCTGCCGTCCGG
ACAATGCTGCTACGTCAGTGCCTCGGTACAACGGGTGGGAGGGAGGAAGG
AAAGGACGGAGGGAGATGGAAAGCGGGGACACTGGAGGCGTTAAAGGAGG
TACTAGCCTCTCTTCCCTTTTCGTCTGGAGTAGAAATGGCAGGCAAAGAG
AAGAAGCGAAAAGGAATAGAGATAGAAGCGGAGGAAGAACCGACCAATAG
GCGACGACCTAAGAAGCAGCAGCAGAAGCAGCAGCAATAGTAGCTGTAGC
CGACGAGAAACGTGCGGAAAAGCCGTGGCAATGCTGGGAAGTCGAAGGGA
GAAGGGATTAGAAAAAGTGTGAATGTAAATAAAAG back to topCoding sequence (CDS) from alignment at scaffold_11:706837..707671- >mRNA_5841 ID=mRNA_5841|Name=jgi.p|Nanoce1779_2|590513|organism=Nannochloropsis oceanica|type=CDS|length=483bp|location=Sequence derived from alignment at scaffold_11:706837..707671- (Nannochloropsis oceanica)
ATGACGAAGAGAAAGGGAGGACGGGAGGATGACAAGAAGAAAGAGGATGA
GGATAAGAAGGAGAAGATGAAGAAGAAGAAAGAGAAGGAGAAGAAGAAGG
AGGAGGAGGGCGAGGAGGAGGTAGAAGGAGCGAGTTTTCTAAAAGAGCTC
TCTGAGGCTTTGACGCTGGCAAGGACGAATGAATGGAAGATGAAGGAGGG
AATGATGAGAAGAGTGGTCGATATTGTGGGGGCTGCCGTCCGGACAATGC
TGCTACGTCAGTGCCTCGGTACAACGGGTGGGAGGGAGGAAGGAAAGGAC
GGAGGGAGATGGAAAGCGGGGACACTGGAGGCGTTAAAGGAGGTACTAGC
CTCTCTTCCCTTTTCGTCTGGAGTAGAAATGGCAGGCAAAGAGAAGAAGC
GAAAAGGAATAGAGATAGAAGCGGAGGAAGAACCGACCAATAGGCGACGA
CCTAAGAAGCAGCAGCAGAAGCAGCAGCAATAG back to top
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