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Properties
Property Name | Value |
TranscriptId | 600811 |
Track | FilteredModels2 |
ProteinId | 600725 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_22 | supercontig | scaffold_22:296683..298595 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7971 ID=mRNA_7971|Name=jgi.p|Nanoce1779_2|600725|organism=Nannochloropsis oceanica|type=mRNA|length=1913bp ACAGAAAAATACACAGATCCTTCGTTCTCCTCTCTACCCGCCAAACAAGG CCACAAGAAAACGGAACTCATCCGCGATCTTGCAGCACCAGCGGCAACAG CAGCAGTAGCAACAACAGCAGCAGCACCAGCGATTGCAGCGGCAGCAGTC CCTCTCAACAAAGTCATACGTACCCGTACCCCGCGTTCCACCATCCCCCG TGCACTCACGCCCCGGGTCGAAAACGGCTCGTCCTCTTCCTCCCTTATTT CCTCCTCCTCATCCTCCTCCTCCTCCATATCACAACAAAAGAGGCTCTTC CGTCTTCTCTCTTGGAATGTTGCAGGGCTACGAGGTCTTCTTAAAAAAGG AGATGCCACCATTGACGCTTTCCGCTCCCTCCTTCTCCACGAAAAACCTG ATATTCTCTGCCTCCAGGAGACCAAACTGCAAGAGGGTAGGCGCACTGCT TTCGTCCCATTCTGTCGTACTCTCTCTTGTTTTCTTCCTCCCTCCCTCCC TCCCTCCCTACCTTTTTCTCCCCTCTGCGGACTACGTACGTCGCTAAAGT GAGCGTTGCTATGCATGCGTTAAGTTTGCCTCGGTGTCAAATGAACTGGC CATTGTGTACCTTCAACCCTACCTTCCTCCCCCTCTTCCTCCTTCCCTTT ACCAAATAGACCATGTGGCTGAAGTCAGCGCTGCCTTGCGTGCTTTACAT TTGCCTGGATTTCACGGCAACTGGCATTGCTCCACCGCCAAAAAAGGCTA TTCAGGCACCTCAATTTTAATAAGTGAACAAGCAGGGCTGAGTCTAGGCC CTGGGCGGGTGAAGTGCGGGATGGAGGGGGAGGAGGACGGGGAGGGGGAA GGAAGGGTCATAACGATTGATTTTGGTGCGTTTAGTTTGGTGAATGTCTA CACGCCGAATAGTGGGGAGGGATTGAAGAGGTTGGAGTTTCGAACCAACA GTTGGGACAGAGCATTTGAACAGCATTTGTTGCGGTTGCAGAGGGGAGGA GAAGGAGGAAGAGGAGGAGGCGGAATAGAGGGAGGGAGGGCGGTGTTGTG TTGTGGAGATTTGAATGTAGCGTTTGAGGATGCTGATTTTTACAATCCAG GCGAGCCACGGATGGCTAAGGCTGCGGGGACAACACCGGAGGAACGAGCG TCGTTCGGGCGCTTGTTGGAGGGAGCGGGGATGGTGGACACGTTCAGATT TTACCATCCGGAGGCGACGGGGTGTTATTCGTATTGGTCGATGCGGGCAG GGAACCGGCCTTTCAATCGAGGGATGCGCCTGGATTATTTCTTGGCAAGT CGGAATATGATGAGGGGTAAGGGGGAGGGGAAGAAGGGAGTGCCAAGGGT GTTGGACTCGTTTATTTTGGACCAGGCGACGGTGGGGTTGAGCGACCATG CACCGGTTGGTGTGTTATTAGAGGTAGAGGGAGTGGGTGGAGCGCCAGAC GGGAGGGGAAAATTGGGAGACTAAAAAAGATGCACGTCGTGTGCTTGTGT ATGCACTCTCTTGCTATTTGGCTCATGGATTTGGGTTTTGGTTTGTTTCT TTGCCTACCGGTCTGCTGATATTGTGTTAGATGCGTATGTGCCGGTCTCG CCCTTGGCGCTTGGGTAGCCTTAACCAGCGGGGTCAAATAGCCAGCAGGC TGTCGGAAGGCATAACTCATTTTCGTCGCATGCACAAGAACCCGCACACC TCCTCCCCCTTCCTCCTCTCCCCTCCTTATTCCCCACTACCTTCTTTCTT TGCCTGTCTTCCCTCTCTCCGCCTGTCTTTTTCCCTCTTCTTCACATTTT CTTCCTCTCCCCCTTCCCCTCTCCTCTCCTCCTTTTGGCCGCTCTTCCCA CCTTCCCTCCTCTTCCTCTTCCCTCCTCCTGCTTTTATTTGAAAGACGCG AGCTTTATTCGCG back to topprotein sequence of jgi.p|Nanoce1779_2|600725 >mRNA_7971-protein ID=mRNA_7971-protein|Name=jgi.p|Nanoce1779_2|600725|organism=Nannochloropsis oceanica|type=polypeptide|length=218bp MEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFE QHLLRLQRGGEGGRGGGGIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAK AAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNR GMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLL EVEGVGGAPDGRGKLGD* back to topmRNA from alignment at scaffold_22:296683..298595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7971 ID=mRNA_7971|Name=jgi.p|Nanoce1779_2|600725|organism=Nannochloropsis oceanica|type=mRNA|length=1913bp|location=Sequence derived from alignment at scaffold_22:296683..298595- (Nannochloropsis oceanica) ACAGAAAAATACACAGATCCTTCGTTCTCCTCTCTACCCGCCAAACAAGG
CCACAAGAAAACGGAACTCATCCGCGATCTTGCAGCACCAGCGGCAACAG
CAGCAGTAGCAACAACAGCAGCAGCACCAGCGATTGCAGCGGCAGCAGTC
CCTCTCAACAAAGTCATACGTACCCGTACCCCGCGTTCCACCATCCCCCG
TGCACTCACGCCCCGGGTCGAAAACGGCTCGTCCTCTTCCTCCCTTATTT
CCTCCTCCTCATCCTCCTCCTCCTCCATATCACAACAAAAGAGGCTCTTC
CGTCTTCTCTCTTGGAATGTTGCAGGGCTACGAGGTCTTCTTAAAAAAGG
AGATGCCACCATTGACGCTTTCCGCTCCCTCCTTCTCCACGAAAAACCTG
ATATTCTCTGCCTCCAGGAGACCAAACTGCAAGAGGGTAGGCGCACTGCT
TTCGTCCCATTCTGTCGTACTCTCTCTTGTTTTCTTCCTCCCTCCCTCCC
TCCCTCCCTACCTTTTTCTCCCCTCTGCGGACTACGTACGTCGCTAAAGT
GAGCGTTGCTATGCATGCGTTAAGTTTGCCTCGGTGTCAAATGAACTGGC
CATTGTGTACCTTCAACCCTACCTTCCTCCCCCTCTTCCTCCTTCCCTTT
ACCAAATAGACCATGTGGCTGAAGTCAGCGCTGCCTTGCGTGCTTTACAT
TTGCCTGGATTTCACGGCAACTGGCATTGCTCCACCGCCAAAAAAGGCTA
TTCAGGCACCTCAATTTTAATAAGTGAACAAGCAGGGCTGAGTCTAGGCC
CTGGGCGGGTGAAGTGCGGGATGGAGGGGGAGGAGGACGGGGAGGGGGAA
GGAAGGGTCATAACGATTGATTTTGGTGCGTTTAGTTTGGTGAATGTCTA
CACGCCGAATAGTGGGGAGGGATTGAAGAGGTTGGAGTTTCGAACCAACA
GTTGGGACAGAGCATTTGAACAGCATTTGTTGCGGTTGCAGAGGGGAGGA
GAAGGAGGAAGAGGAGGAGGCGGAATAGAGGGAGGGAGGGCGGTGTTGTG
TTGTGGAGATTTGAATGTAGCGTTTGAGGATGCTGATTTTTACAATCCAG
GCGAGCCACGGATGGCTAAGGCTGCGGGGACAACACCGGAGGAACGAGCG
TCGTTCGGGCGCTTGTTGGAGGGAGCGGGGATGGTGGACACGTTCAGATT
TTACCATCCGGAGGCGACGGGGTGTTATTCGTATTGGTCGATGCGGGCAG
GGAACCGGCCTTTCAATCGAGGGATGCGCCTGGATTATTTCTTGGCAAGT
CGGAATATGATGAGGGGTAAGGGGGAGGGGAAGAAGGGAGTGCCAAGGGT
GTTGGACTCGTTTATTTTGGACCAGGCGACGGTGGGGTTGAGCGACCATG
CACCGGTTGGTGTGTTATTAGAGGTAGAGGGAGTGGGTGGAGCGCCAGAC
GGGAGGGGAAAATTGGGAGACTAAAAAAGATGCACGTCGTGTGCTTGTGT
ATGCACTCTCTTGCTATTTGGCTCATGGATTTGGGTTTTGGTTTGTTTCT
TTGCCTACCGGTCTGCTGATATTGTGTTAGATGCGTATGTGCCGGTCTCG
CCCTTGGCGCTTGGGTAGCCTTAACCAGCGGGGTCAAATAGCCAGCAGGC
TGTCGGAAGGCATAACTCATTTTCGTCGCATGCACAAGAACCCGCACACC
TCCTCCCCCTTCCTCCTCTCCCCTCCTTATTCCCCACTACCTTCTTTCTT
TGCCTGTCTTCCCTCTCTCCGCCTGTCTTTTTCCCTCTTCTTCACATTTT
CTTCCTCTCCCCCTTCCCCTCTCCTCTCCTCCTTTTGGCCGCTCTTCCCA
CCTTCCCTCCTCTTCCTCTTCCCTCCTCCTGCTTTTATTTGAAAGACGCG
AGCTTTATTCGCG back to topCoding sequence (CDS) from alignment at scaffold_22:296683..298595- >mRNA_7971 ID=mRNA_7971|Name=jgi.p|Nanoce1779_2|600725|organism=Nannochloropsis oceanica|type=CDS|length=654bp|location=Sequence derived from alignment at scaffold_22:296683..298595- (Nannochloropsis oceanica) ATGGAGGGGGAGGAGGACGGGGAGGGGGAAGGAAGGGTCATAACGATTGA TTTTGGTGCGTTTAGTTTGGTGAATGTCTACACGCCGAATAGTGGGGAGG GATTGAAGAGGTTGGAGTTTCGAACCAACAGTTGGGACAGAGCATTTGAA CAGCATTTGTTGCGGTTGCAGAGGGGAGGAGAAGGAGGAAGAGGAGGAGG CGGAATAGAGGGAGGGAGGGCGGTGTTGTGTTGTGGAGATTTGAATGTAG CGTTTGAGGATGCTGATTTTTACAATCCAGGCGAGCCACGGATGGCTAAG GCTGCGGGGACAACACCGGAGGAACGAGCGTCGTTCGGGCGCTTGTTGGA GGGAGCGGGGATGGTGGACACGTTCAGATTTTACCATCCGGAGGCGACGG GGTGTTATTCGTATTGGTCGATGCGGGCAGGGAACCGGCCTTTCAATCGA GGGATGCGCCTGGATTATTTCTTGGCAAGTCGGAATATGATGAGGGGTAA GGGGGAGGGGAAGAAGGGAGTGCCAAGGGTGTTGGACTCGTTTATTTTGG ACCAGGCGACGGTGGGGTTGAGCGACCATGCACCGGTTGGTGTGTTATTA GAGGTAGAGGGAGTGGGTGGAGCGCCAGACGGGAGGGGAAAATTGGGAGA CTAA back to top
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