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Properties
Property Name | Value |
TranscriptId | 568412 |
Track | FilteredModels2 |
ProteinId | 568326 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_23 | supercontig | scaffold_23:167667..169646 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8243 ID=mRNA_8243|Name=jgi.p|Nanoce1779_2|568326|organism=Nannochloropsis oceanica|type=mRNA|length=1038bp ATGCATGCAATAATTCCGGGACTGGAGCAGAAGGCAGGACAGGGCGCGAA AGAGGGAGGTGGAAGGAAGGAAGTAAGGCGGATGCTATCGGATGTGGTTA CAGAGGAGCACGTGGCAGATATCATAAGTCGGGCGACAGGGATCCCTCTC GGGAGTTTGTTGCAAGGGGAGAGCGATCGGTTGCTTAATATGGAGGAGAC CCTGAAGGAGGGTGTAGTGGGCCAGGATCAGGCCATCAAGGCGATTGCCA ATTGCGTCAGACTCTCACGCGCTGGCCTCCGTCCGCACGAGCGACCTTTG GGTGTCTTCCTCTTTTTGGGCCCAACAGGGGTTGGCAAGACACACCTGAC CAAGAAGGGCCGCACGGTTGATTTCCGCAACACCCTCATCATCATGACTA GTAATCTGGGCGCGCAGTACTTAAGTGAGCTCCCGCCCGACCAGCCGTCC TCTGTGGCCCGTGATGACGTCATGCGCGTCGTGCGCGCGACGTTCCCACC GGAGTTTATTAACCGCATCGACAACGTCGTCCTCTTCAACCGACTGAAAC GCACCAACATGGACCAAATCGTGAGACAACAGCTCGGCTCTCTTCGGTCC CTCCTTCACGAGCGCGGTCTGGGACTTACGGTGGAGAGCTCTGTTGTCAG CTTGCTGGCTGATCTGGGATATGATCCTGCCTATGGTGCCAGACCGTTGA AAAGAACGATGCAAACGACTCTTTTGAATCCGTTAGCTACTTTGTTGCTC GAGGGAAAGGCCAAGGCGGAAGATATGTTATGGTTGGTGAGGGTGAAGCG GGCGGAAGTAAAGGAGGGGAGGGATACCATCTTGTTCGGACGGGGCGCGA TTGGCGGGGGAGAGGAAGAGGGGGGGGAGGAGTGGGATGAGGGGGGTTCA CAGGAGTTGATTTTGGGGGAGGACGTATTGGTGTGTCGGGTAGTCGAGGG GGGATACATGGAAGGAGGGGAGAATGGTGGAGATGGGATTGAAAAGAGGG GGGGGAAAGAGGACGAAGAGATGAGGGAGGTGGTTTAG back to topprotein sequence of jgi.p|Nanoce1779_2|568326 >mRNA_8243-protein ID=mRNA_8243-protein|Name=jgi.p|Nanoce1779_2|568326|organism=Nannochloropsis oceanica|type=polypeptide|length=346bp MHAIIPGLEQKAGQGAKEGGGRKEVRRMLSDVVTEEHVADIISRATGIPL GSLLQGESDRLLNMEETLKEGVVGQDQAIKAIANCVRLSRAGLRPHERPL GVFLFLGPTGVGKTHLTKKGRTVDFRNTLIIMTSNLGAQYLSELPPDQPS SVARDDVMRVVRATFPPEFINRIDNVVLFNRLKRTNMDQIVRQQLGSLRS LLHERGLGLTVESSVVSLLADLGYDPAYGARPLKRTMQTTLLNPLATLLL EGKAKAEDMLWLVRVKRAEVKEGRDTILFGRGAIGGGEEEGGEEWDEGGS QELILGEDVLVCRVVEGGYMEGGENGGDGIEKRGGKEDEEMREVV* back to topmRNA from alignment at scaffold_23:167667..169646+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8243 ID=mRNA_8243|Name=jgi.p|Nanoce1779_2|568326|organism=Nannochloropsis oceanica|type=mRNA|length=1980bp|location=Sequence derived from alignment at scaffold_23:167667..169646+ (Nannochloropsis oceanica) ATGCATGCAATAATTCCGGGACTGGAGCAGAAGGCAGGACAGGGCGCGAA
AGAGGGAGGTGGAAGGAAGGAAGTAAGGCGGATGCTATCGGATGTGGTTA
CAGAGGAGCACGTGGCAGATATCATAAGTCGGGCGACAGGGATCCCTCTC
GGGAGTTTGTTGCAAGGGGAGAGCGATCGGTTGCTTAATATGGAGGAGAC
CCTGAAGGAGGGTGTAGTGGGCCAGGATCAGGCCATCAAGGCGATTGCCA
ATTGCGTCAGGTGAGACGCCATGTCATTCCTTCCTTCTCTCTTTCGCTCC
CTCTGTCTATTTCACGCGGGGACCCCACTGCTCTGTCTCTCCACGCCACC
GCATGCAGGCAAAGCATATGAACGCTCACCTCCCCTCTATATCTTTGTCG
CTTATTCCATCCTTCATCTCTCCATCCCTCCCTCTCTCAGACTCTCACGC
GCTGGCCTCCGTCCGCACGAGCGACCTTTGGGTGTCTTCCTCTTTTTGGG
CCCAACAGGGGTTGGCAAGACACACCTGACCAAGAAGGTGTGTGAATTCC
TCTTCCAGGACGAGCGGGCGATGACTCGGTTGGACATGACGGAGTTCAGC
GAGAAGTTCACGGTGTCGCGGTTGATTGGCTCGCCGCCGGGGTATGTTGG
TTATGAGGTACGGAAGGGATGGATGGAGGGAGGGACGGAGAGAGGGAGGG
AGGGAGGTGTAACAATTGATTAAATGATAATTGTCACGTATTTACTCTTT
TGTTCTCCCTTTTCCCCTCCCTCCATCCCTCTCTCTCTCTCTACTCTCTT
TAGGAAGGGGGAGTCTTGACCGAGTCCATTCGCCGGAAGCCATATCAAGT
CCTGTTGCTGGATGAGTTTGAAAAGGCGCATCGCGAAGTAGGGAACCTTT
TGCTGCAGGTCTTTGACGACGGTCGCTTGACCGATTCTCAGGTAAAGAAA
TGTCGGCGTCCGTGTACAGGTTCTCTTTAGCTTCGATACTTCGTCTTCGT
TTTTCACGGCTTGGAGCATTTCTCTGAACGGTGGGGTCCTCTCTCTCATG
CTCTTCCCCTGCTCCCCCCCCCCGCCCCTCTTCCTCAGGGCCGCACGGTT
GATTTCCGCAACACCCTCATCATCATGACTAGTAATCTGGGCGCGCAGTA
CTTAAGTGAGCTCCCGCCCGACCAGCCGTCCTCTGTGGCCCGTGATGACG
TCATGCGCGTCGTGCGCGCGACGTTCCCACCGGAGTTTATTAACCGGTAG
GTGCTTCCCCCCTCCCTTCCGTGCGCGTTTATATATGGTGAAGAGACATT
CTTATTTGTTGGCCTGCTTTCAATGTTTGTGACCCGCGTGCAGCCACAAC
TCAGAACTCTTCAATTTCTTCGGTACCAGCGCGGCTTTGGCTTGAAAAGA
TGCAAACAACTAACCTCCCTTTTTCTGTATTTCCTCGTGTCCTATGAACC
AAAACAGCATCGACAACGTCGTCCTCTTCAACCGACTGAAACGCACCAAC
ATGGACCAAATCGTGAGACAACAGCTCGGCTCTCTTCGGTCCCTCCTTCA
CGAGCGCGGTCTGGGACTTACGGTGGAGAGCTCTGTTGTCAGCTTGCTGG
CTGATCTGGGATATGATCCTGCCTATGGTGCCAGACCGTTGAAAAGAACG
ATGCAAACGACTCTTTTGAATCCGTTAGCTACTTTGTTGCTCGAGGGAAA
GGCCAAGGCGGAAGATATGTTATGGTTGGTGAGGGTGAAGCGGGCGGAAG
TAAAGGAGGGGAGGGATACCATCTTGTTCGGACGGGGCGCGATTGGCGGG
GGAGAGGAAGAGGGGGGGGAGGAGTGGGATGAGGGGGGTTCACAGGAGTT
GATTTTGGGGGAGGACGTATTGGTGTGTCGGGTAGTCGAGGGGGGATACA
TGGAAGGAGGGGAGAATGGTGGAGATGGGATTGAAAAGAGGGGGGGGAAA
GAGGACGAAGAGATGAGGGAGGTGGTTTAG back to topCoding sequence (CDS) from alignment at scaffold_23:167667..169646+ >mRNA_8243 ID=mRNA_8243|Name=jgi.p|Nanoce1779_2|568326|organism=Nannochloropsis oceanica|type=CDS|length=4152bp|location=Sequence derived from alignment at scaffold_23:167667..169646+ (Nannochloropsis oceanica) ATGCATGCAATAATTCCGGGACTGGAGCAGAAGGCAGGACAGGGCGCGAA AGAGGGAGGTGGAAGGAAGGAAGTAAGGCGGATGCTATCGGATGTGGTTA CAGAGGAGCACGTGGCAGATATCATAAGTCGGGCGACAGGGATCCCTCTC GGGAGTTTGTTGCAAGGGGAGAGCGATCGGTTGCTTAATATGGAGGAGAC CCTGAAGGAGGGTGTAGTGGGCCAGGATCAGGCCATCAAGGCGATTGCCA ATTGCGTCAGACTCTCACGCGCTGGCCTCCGTCCGCACGAGCGACCTTTG GGTGTCTTCCTCTTTTTGGGCCCAACAGGGGTTGGCAAGACACACCTGAC CAAGAAGGGCCGCACGGTTGATTTCCGCAACACCCTCATCATCATGACTA GTAATCTGGGCGCGCAGTACTTAAGTGAGCTCCCGCCCGACCAGCCGTCC TCTGTGGCCCGTGATGACGTCATGCGCGTCGTGCGCGCGACGTTCCCACC GGAGTTTATTAACCGCATCGACAACGTCGTCCTCTTCAACCGACTGAAAC GCACCAACATGGACCAAATCGTGAGACAACAGCTCGGCTCTCTTCGGTCC CTCCTTCACGAGCGCGGTCTGGGACTTACGGTGGAGAGCTCTGTTGTCAG CTTGCTGGCTGATCTGGGATATGATCCTGCCTATGGTGCCAGACCGTTGA AAAGAACGATGCAAACGACTCTTTTGAATCCGTTAGCTACTTTGTTGCTC GAGGGAAAGGCCAAGGCGGAAGATATGTTATGGTTGGTGAGGGTGAAGCG GGCGGAAGTAAAGGAGGGGAGGGATACCATCTTGTTCGGACGGGGCGCGA TTGGCGGGGGAGAGGAAGAGGGGGGGGAGGAGTGGGATGAGGGGGGTTCA CAGGAGTTGATTTTGGGGGAGGACGTATTGGTGTGTCGGGTAGTCGAGGG GGGATACATGGAAGGAGGGGAGAATGGTGGAGATGGGATTGAAAAGAGGG GGGGGAAAGAGGACGAAGAGATGAGGGAGGTGGTTTAGATGCATGCAATA ATTCCGGGACTGGAGCAGAAGGCAGGACAGGGCGCGAAAGAGGGAGGTGG AAGGAAGGAAGTAAGGCGGATGCTATCGGATGTGGTTACAGAGGAGCACG TGGCAGATATCATAAGTCGGGCGACAGGGATCCCTCTCGGGAGTTTGTTG CAAGGGGAGAGCGATCGGTTGCTTAATATGGAGGAGACCCTGAAGGAGGG TGTAGTGGGCCAGGATCAGGCCATCAAGGCGATTGCCAATTGCGTCAGAC TCTCACGCGCTGGCCTCCGTCCGCACGAGCGACCTTTGGGTGTCTTCCTC TTTTTGGGCCCAACAGGGGTTGGCAAGACACACCTGACCAAGAAGGGCCG CACGGTTGATTTCCGCAACACCCTCATCATCATGACTAGTAATCTGGGCG CGCAGTACTTAAGTGAGCTCCCGCCCGACCAGCCGTCCTCTGTGGCCCGT GATGACGTCATGCGCGTCGTGCGCGCGACGTTCCCACCGGAGTTTATTAA CCGCATCGACAACGTCGTCCTCTTCAACCGACTGAAACGCACCAACATGG ACCAAATCGTGAGACAACAGCTCGGCTCTCTTCGGTCCCTCCTTCACGAG CGCGGTCTGGGACTTACGGTGGAGAGCTCTGTTGTCAGCTTGCTGGCTGA TCTGGGATATGATCCTGCCTATGGTGCCAGACCGTTGAAAAGAACGATGC AAACGACTCTTTTGAATCCGTTAGCTACTTTGTTGCTCGAGGGAAAGGCC AAGGCGGAAGATATGTTATGGTTGGTGAGGGTGAAGCGGGCGGAAGTAAA GGAGGGGAGGGATACCATCTTGTTCGGACGGGGCGCGATTGGCGGGGGAG AGGAAGAGGGGGGGGAGGAGTGGGATGAGGGGGGTTCACAGGAGTTGATT TTGGGGGAGGACGTATTGGTGTGTCGGGTAGTCGAGGGGGGATACATGGA AGGAGGGGAGAATGGTGGAGATGGGATTGAAAAGAGGGGGGGGAAAGAGG ACGAAGAGATGAGGGAGGTGGTTTAGATGCATGCAATAATTCCGGGACTG GAGCAGAAGGCAGGACAGGGCGCGAAAGAGGGAGGTGGAAGGAAGGAAGT AAGGCGGATGCTATCGGATGTGGTTACAGAGGAGCACGTGGCAGATATCA TAAGTCGGGCGACAGGGATCCCTCTCGGGAGTTTGTTGCAAGGGGAGAGC GATCGGTTGCTTAATATGGAGGAGACCCTGAAGGAGGGTGTAGTGGGCCA GGATCAGGCCATCAAGGCGATTGCCAATTGCGTCAGACTCTCACGCGCTG GCCTCCGTCCGCACGAGCGACCTTTGGGTGTCTTCCTCTTTTTGGGCCCA ACAGGGGTTGGCAAGACACACCTGACCAAGAAGGGCCGCACGGTTGATTT CCGCAACACCCTCATCATCATGACTAGTAATCTGGGCGCGCAGTACTTAA GTGAGCTCCCGCCCGACCAGCCGTCCTCTGTGGCCCGTGATGACGTCATG CGCGTCGTGCGCGCGACGTTCCCACCGGAGTTTATTAACCGCATCGACAA CGTCGTCCTCTTCAACCGACTGAAACGCACCAACATGGACCAAATCGTGA GACAACAGCTCGGCTCTCTTCGGTCCCTCCTTCACGAGCGCGGTCTGGGA CTTACGGTGGAGAGCTCTGTTGTCAGCTTGCTGGCTGATCTGGGATATGA TCCTGCCTATGGTGCCAGACCGTTGAAAAGAACGATGCAAACGACTCTTT TGAATCCGTTAGCTACTTTGTTGCTCGAGGGAAAGGCCAAGGCGGAAGAT ATGTTATGGTTGGTGAGGGTGAAGCGGGCGGAAGTAAAGGAGGGGAGGGA TACCATCTTGTTCGGACGGGGCGCGATTGGCGGGGGAGAGGAAGAGGGGG GGGAGGAGTGGGATGAGGGGGGTTCACAGGAGTTGATTTTGGGGGAGGAC GTATTGGTGTGTCGGGTAGTCGAGGGGGGATACATGGAAGGAGGGGAGAA TGGTGGAGATGGGATTGAAAAGAGGGGGGGGAAAGAGGACGAAGAGATGA GGGAGGTGGTTTAGATGCATGCAATAATTCCGGGACTGGAGCAGAAGGCA GGACAGGGCGCGAAAGAGGGAGGTGGAAGGAAGGAAGTAAGGCGGATGCT ATCGGATGTGGTTACAGAGGAGCACGTGGCAGATATCATAAGTCGGGCGA CAGGGATCCCTCTCGGGAGTTTGTTGCAAGGGGAGAGCGATCGGTTGCTT AATATGGAGGAGACCCTGAAGGAGGGTGTAGTGGGCCAGGATCAGGCCAT CAAGGCGATTGCCAATTGCGTCAGACTCTCACGCGCTGGCCTCCGTCCGC ACGAGCGACCTTTGGGTGTCTTCCTCTTTTTGGGCCCAACAGGGGTTGGC AAGACACACCTGACCAAGAAGGGCCGCACGGTTGATTTCCGCAACACCCT CATCATCATGACTAGTAATCTGGGCGCGCAGTACTTAAGTGAGCTCCCGC CCGACCAGCCGTCCTCTGTGGCCCGTGATGACGTCATGCGCGTCGTGCGC GCGACGTTCCCACCGGAGTTTATTAACCGCATCGACAACGTCGTCCTCTT CAACCGACTGAAACGCACCAACATGGACCAAATCGTGAGACAACAGCTCG GCTCTCTTCGGTCCCTCCTTCACGAGCGCGGTCTGGGACTTACGGTGGAG AGCTCTGTTGTCAGCTTGCTGGCTGATCTGGGATATGATCCTGCCTATGG TGCCAGACCGTTGAAAAGAACGATGCAAACGACTCTTTTGAATCCGTTAG CTACTTTGTTGCTCGAGGGAAAGGCCAAGGCGGAAGATATGTTATGGTTG GTGAGGGTGAAGCGGGCGGAAGTAAAGGAGGGGAGGGATACCATCTTGTT CGGACGGGGCGCGATTGGCGGGGGAGAGGAAGAGGGGGGGGAGGAGTGGG ATGAGGGGGGTTCACAGGAGTTGATTTTGGGGGAGGACGTATTGGTGTGT CGGGTAGTCGAGGGGGGATACATGGAAGGAGGGGAGAATGGTGGAGATGG GATTGAAAAGAGGGGGGGGAAAGAGGACGAAGAGATGAGGGAGGTGGTTT AG back to top
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