|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 568932 |
| Track | FilteredModels2 |
| ProteinId | 568846 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_29 | supercontig | scaffold_29:36212..37309 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8856 ID=mRNA_8856|Name=jgi.p|Nanoce1779_2|568846|organism=Nannochloropsis oceanica|type=mRNA|length=966bp
ATGGAGGAAGAGGAGCTAGATGGAGGAGGAGCTGCAGCAGCCTTGGATCC
AGTGGAGTTGTATTGCACTCGATTCGCAGGGAAGCTGGCCGTGACGCTGG
CAGCGGGAGTGGTGGGGTCTGGGATGGGCCTTGCTTTGAGCGCGTCGGCT
TTCCATCGACCGGGGACGTTTGCTTTGGGTGGGTTAGGATTAGGAGTGTT
TTTATCTTTATTAAAAAACGATTTTGGGGATCTGTTTCGGGCGTTGGGCT
TGTTACTGATATATCTGTTGGAGAGGCAGAGGCAGGTGGGACAAGCCTAC
TCGGCCTTGGGGCAGCTGAGACCAATGGTGCGCTTGGCGCCACGACGGCC
GTTTCCGCCGGTGGAGAATCCGTGGGCGTATGTCCGTGCGTCGCCCAGCG
ACATTGAGTTCAGCATGACCAAGACCCTGGTGGCTGTCGTCTTTGTCGGA
GCTCTCTACGGATACCTCCTGGCGAGTGCCATCTCCCTCTTCTTCCTGCC
GGCCTGGTTGCTGGCACTGATTGGTGGGGGGATAGGTGGGTACACGGCCA
CACTGCGGGACGGGAGGGGGGACATGGTCAGGTGCTTGGGAATGAAATTG
GTGGCCTTTTTTGGATTAATTAAAGCGGTGGAGGAGGAGTTGAGCGTCTG
GCTGAAGCTTGGGAAGGTGTGTCACATCTCGTATGGGCACGCTGCCAAAT
TTGATGAAAGGTGGAAGGTTAGGGAAAATTTGTGGAAGGTAGGTGGGTGG
GTGAGTGGGAAGCTGACCAAAGAAGCGGAGAGAGTGAGGGGGGACCGTAT
GGAGGGGGAAGGAGGGAGGGAGGGAGGGAGAGAAGGAGGGGGAGGGTTTG
GAGGGTACCCGGGAGGAAGATTTGAGCAGCCGACATATGGTGGGGAAGAA
CGATGGCAAGGAGGAGGAAGGGCGGGAGCGAGGCCGCCTGTGAATTCGTC
GTGGGGGCAGCGATGA back to topprotein sequence of jgi.p|Nanoce1779_2|568846 >mRNA_8856-protein ID=mRNA_8856-protein|Name=jgi.p|Nanoce1779_2|568846|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MEEEELDGGGAAAALDPVELYCTRFAGKLAVTLAAGVVGSGMGLALSASA
FHRPGTFALGGLGLGVFLSLLKNDFGDLFRALGLLLIYLLERQRQVGQAY
SALGQLRPMVRLAPRRPFPPVENPWAYVRASPSDIEFSMTKTLVAVVFVG
ALYGYLLASAISLFFLPAWLLALIGGGIGGYTATLRDGRGDMVRCLGMKL
VAFFGLIKAVEEELSVWLKLGKVCHISYGHAAKFDERWKVRENLWKVGGW
VSGKLTKEAERVRGDRMEGEGGREGGREGGGGFGGYPGGRFEQPTYGGEE
RWQGGGRAGARPPVNSSWGQR* back to topmRNA from alignment at scaffold_29:36212..37309- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8856 ID=mRNA_8856|Name=jgi.p|Nanoce1779_2|568846|organism=Nannochloropsis oceanica|type=mRNA|length=1098bp|location=Sequence derived from alignment at scaffold_29:36212..37309- (Nannochloropsis oceanica)
ATGGAGGAAGAGGAGCTAGATGGAGGAGGAGCTGCAGCAGCCTTGGATCC
AGTGGAGTTGTATTGCACTCGATTCGCAGGGAAGCTGGCCGTGACGCTGG
CAGCGGGAGTGGTGGGGTCTGGGATGGGCCTTGCTTTGAGCGCGTCGGCT
TTCCATCGACCGGGGACGTTTGCTTTGGGTGGGTTAGGATTAGGAGTGTT
TTTATCTTTATTAAAAAACGATTTTGGGGATCTGTTTCGGGCGTTGGGCT
TGTTACTGATATATCTGTTGGAGAGGCAGAGGCAGGTGGGACAAGCCTAC
TCGGCCTTGGGGCAGCTGAGACCAATGGTGCGCTTGGCGCCACGACGGCC
GTTTCCGCCGGTGGAGAATCCGTGGGCGTATGTCCGTGCGTCGCCCAGGT
AGGAAGGGAGGGCGGGGAGGAGGTTGGGAGGGAGGGAGGGAGCATGGATT
GGATGAGATTGTATTTTACTGCTTCTAAATCGCTTATTTCCCCATCGCTT
CCTCTCTCTCTCTCCCTTGCTCTGGAACAGCGACATTGAGTTCAGCATGA
CCAAGACCCTGGTGGCTGTCGTCTTTGTCGGAGCTCTCTACGGATACCTC
CTGGCGAGTGCCATCTCCCTCTTCTTCCTGCCGGCCTGGTTGCTGGCACT
GATTGGTGGGGGGATAGGTGGGTACACGGCCACACTGCGGGACGGGAGGG
GGGACATGGTCAGGTGCTTGGGAATGAAATTGGTGGCCTTTTTTGGATTA
ATTAAAGCGGTGGAGGAGGAGTTGAGCGTCTGGCTGAAGCTTGGGAAGGT
GTGTCACATCTCGTATGGGCACGCTGCCAAATTTGATGAAAGGTGGAAGG
TTAGGGAAAATTTGTGGAAGGTAGGTGGGTGGGTGAGTGGGAAGCTGACC
AAAGAAGCGGAGAGAGTGAGGGGGGACCGTATGGAGGGGGAAGGAGGGAG
GGAGGGAGGGAGAGAAGGAGGGGGAGGGTTTGGAGGGTACCCGGGAGGAA
GATTTGAGCAGCCGACATATGGTGGGGAAGAACGATGGCAAGGAGGAGGA
AGGGCGGGAGCGAGGCCGCCTGTGAATTCGTCGTGGGGGCAGCGATGA back to topCoding sequence (CDS) from alignment at scaffold_29:36212..37309- >mRNA_8856 ID=mRNA_8856|Name=jgi.p|Nanoce1779_2|568846|organism=Nannochloropsis oceanica|type=CDS|length=1932bp|location=Sequence derived from alignment at scaffold_29:36212..37309- (Nannochloropsis oceanica)
CGACATTGAGTTCAGCATGACCAAGACCCTGGTGGCTGTCGTCTTTGTCG
GAGCTCTCTACGGATACCTCCTGGCGAGTGCCATCTCCCTCTTCTTCCTG
CCGGCCTGGTTGCTGGCACTGATTGGTGGGGGGATAGGTGGGTACACGGC
CACACTGCGGGACGGGAGGGGGGACATGGTCAGGTGCTTGGGAATGAAAT
TGGTGGCCTTTTTTGGATTAATTAAAGCGGTGGAGGAGGAGTTGAGCGTC
TGGCTGAAGCTTGGGAAGGTGTGTCACATCTCGTATGGGCACGCTGCCAA
ATTTGATGAAAGGTGGAAGGTTAGGGAAAATTTGTGGAAGGTAGGTGGGT
GGGTGAGTGGGAAGCTGACCAAAGAAGCGGAGAGAGTGAGGGGGGACCGT
ATGGAGGGGGAAGGAGGGAGGGAGGGAGGGAGAGAAGGAGGGGGAGGGTT
TGGAGGGTACCCGGGAGGAAGATTTGAGCAGCCGACATATGGTGGGGAAG
AACGATGGCAAGGAGGAGGAAGGGCGGGAGCGAGGCCGCCTGTGAATTCG
TCGTGGGGGCAGCGATGAATGGAGGAAGAGGAGCTAGATGGAGGAGGAGC
TGCAGCAGCCTTGGATCCAGTGGAGTTGTATTGCACTCGATTCGCAGGGA
AGCTGGCCGTGACGCTGGCAGCGGGAGTGGTGGGGTCTGGGATGGGCCTT
GCTTTGAGCGCGTCGGCTTTCCATCGACCGGGGACGTTTGCTTTGGGTGG
GTTAGGATTAGGAGTGTTTTTATCTTTATTAAAAAACGATTTTGGGGATC
TGTTTCGGGCGTTGGGCTTGTTACTGATATATCTGTTGGAGAGGCAGAGG
CAGGTGGGACAAGCCTACTCGGCCTTGGGGCAGCTGAGACCAATGGTGCG
CTTGGCGCCACGACGGCCGTTTCCGCCGGTGGAGAATCCGTGGGCGTATG
TCCGTGCGTCGCCCAGCGACATTGAGTTCAGCATGACCAAGACCCTGGTG
GCTGTCGTCTTTGTCGGAGCTCTCTACGGATACCTCCTGGCGAGTGCCAT
CTCCCTCTTCTTCCTGCCGGCCTGGTTGCTGGCACTGATTGGTGGGGGGA
TAGGTGGGTACACGGCCACACTGCGGGACGGGAGGGGGGACATGGTCAGG
TGCTTGGGAATGAAATTGGTGGCCTTTTTTGGATTAATTAAAGCGGTGGA
GGAGGAGTTGAGCGTCTGGCTGAAGCTTGGGAAGGTGTGTCACATCTCGT
ATGGGCACGCTGCCAAATTTGATGAAAGGTGGAAGGTTAGGGAAAATTTG
TGGAAGGTAGGTGGGTGGGTGAGTGGGAAGCTGACCAAAGAAGCGGAGAG
AGTGAGGGGGGACCGTATGGAGGGGGAAGGAGGGAGGGAGGGAGGGAGAG
AAGGAGGGGGAGGGTTTGGAGGGTACCCGGGAGGAAGATTTGAGCAGCCG
ACATATGGTGGGGAAGAACGATGGCAAGGAGGAGGAAGGGCGGGAGCGAG
GCCGCCTGTGAATTCGTCGTGGGGGCAGCGATGAATGGAGGAAGAGGAGC
TAGATGGAGGAGGAGCTGCAGCAGCCTTGGATCCAGTGGAGTTGTATTGC
ACTCGATTCGCAGGGAAGCTGGCCGTGACGCTGGCAGCGGGAGTGGTGGG
GTCTGGGATGGGCCTTGCTTTGAGCGCGTCGGCTTTCCATCGACCGGGGA
CGTTTGCTTTGGGTGGGTTAGGATTAGGAGTGTTTTTATCTTTATTAAAA
AACGATTTTGGGGATCTGTTTCGGGCGTTGGGCTTGTTACTGATATATCT
GTTGGAGAGGCAGAGGCAGGTGGGACAAGCCTACTCGGCCTTGGGGCAGC
TGAGACCAATGGTGCGCTTGGCGCCACGACGGCCGTTTCCGCCGGTGGAG
AATCCGTGGGCGTATGTCCGTGCGTCGCCCAG back to top
|