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Properties
Property Name | Value |
TranscriptId | 605060 |
Track | FilteredModels2 |
ProteinId | 604974 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:238899..240844 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9028 ID=mRNA_9028|Name=jgi.p|Nanoce1779_2|604974|organism=Nannochloropsis oceanica|type=mRNA|length=1356bp ACAGGCGCGCTAATTTCACGTCTTACGGACCATCACCACTACCGCTAGCT GTACCAGGATCCAATCGTGGGACTGGATAAGCCACGATGACAAGAGTTGT GGCTGGCGAGCTGGATGTGGTCAGCAAGGTGACCTCCACGCACGGCATTA CTGAGGACGATAACCCACTCCTCATGTCGACCAGCCTGGCCAGCAACCAA GAAGGAGTCCTAGGGTTTGCCTCCGGGCTCGTCGCCGGGGTAATAGGGGT CTTGACAGGCTATCCTCTCGACACATTGAAGGTCAAAATGCAAGTATACG GCTCGGGGGCTCAGGTCTCTTTACTGGATGGAAGCGCAGGGCGGAACCCG TTCAAAGTTGTGAGGCAACTTTTTCGGGGAGTCTTACCCCCGCTGGCCAG CACCGGCCTGGTTCAAACGCTCAACTTCGGCGTTTACGATAACACCTTGC GATACCTTCGAGCCCAACGAGATCTAGAAGTGAAGGCTCAAGATGCCGCT GCTTCCGCTGCTGCTTGTGCTTGTGTTCCTTGCGCTACTATTGTAAATGG CAACACACTCTCCGATTACTTTCTGGCTGGGTCTATGGGGGGCGCGGCGA TCAGTGTGATCACCTGCCCGGCGTCGTTGGTGAAGATACAGGTGCAGACA GCGACTAACAGTAGCGTTACATACTGGAGCATCTTGGCGGGTATGCGGCG GAAGGGGCTGGTGGCGGGGTATTATCGTGCATTCCTTCCCGATATTCTCA ACCAAATGTGCGGCCGTGGCGTGTATATGTGCACCTACGAAGGACTCAAG CGCGTTATGCGTCCACCAACTGCCTCCTCCGCCGGCTCTGGCCTCCCCCT TCTCCTCCACCACCAGCAGCAGCAAATGCAGCCACAAATGCAGTCTCAGC CCCTTTATCAACGTATTGTAGCCGGTGCACTTGCAGGGATCTGTGGCTGG CTGGTCATTTACCCTTTGGATGTAATAAAAAGTAGGCTACAAGCGGACGC GTTGGCCCCAGGACACAACAAGTACACCGGCATGACCGACTGTTTCCGAG TCAGCTATGGACAGGGTGGCATCCGTTCCCTTTATTCAGGCCTAGGATTT ACTTTGCTAAGGGCCGTGCCTGTCGCCAGTGTAATTTTGCCTTGTTACGA TGCGACGTATTTTTTGCTGTCGCGGTATATGGACGAGTAGGCAGGGAGGG AGAAAAGGGTAGGGAGTTGGCTTGTGAGGTGTGGGGGAGAGTGTGTAGTT AGCCAAAGGGAAACGTGATAGAATGGACCATCACAAATATGATGTATTTG GCCACCACTTGATGCATGTAAAGTATGTAACAAATAAAGGGAGTCTGGAT TTGTGG back to topprotein sequence of jgi.p|Nanoce1779_2|604974 >mRNA_9028-protein ID=mRNA_9028-protein|Name=jgi.p|Nanoce1779_2|604974|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp MTRVVAGELDVVSKVTSTHGITEDDNPLLMSTSLASNQEGVLGFASGLVA GVIGVLTGYPLDTLKVKMQVYGSGAQVSLLDGSAGRNPFKVVRQLFRGVL PPLASTGLVQTLNFGVYDNTLRYLRAQRDLEVKAQDAAASAAACACVPCA TIVNGNTLSDYFLAGSMGGAAISVITCPASLVKIQVQTATNSSVTYWSIL AGMRRKGLVAGYYRAFLPDILNQMCGRGVYMCTYEGLKRVMRPPTASSAG SGLPLLLHHQQQQMQPQMQSQPLYQRIVAGALAGICGWLVIYPLDVIKSR LQADALAPGHNKYTGMTDCFRVSYGQGGIRSLYSGLGFTLLRAVPVASVI LPCYDATYFLLSRYMDE* back to topmRNA from alignment at scaffold_30:238899..240844+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9028 ID=mRNA_9028|Name=jgi.p|Nanoce1779_2|604974|organism=Nannochloropsis oceanica|type=mRNA|length=1946bp|location=Sequence derived from alignment at scaffold_30:238899..240844+ (Nannochloropsis oceanica) ACAGGCGCGCTAATTTCACGTCTTACGGACCATCACCACTACCGCTAGCT
GTACCAGGATCCAATCGTGGGACTGGATAAGCCACGATGACAAGAGTTGT
GGCTGGCGAGCTGGATGTGGTCAGCAAGGTGGTAAGTGCGCGGAGGAAGG
GGGTTCGTGAGCTCGAGACGAGTAGATTAGACGGACAAGAAACGCAGTTT
AGGGGTAGCAATCGCAGTGCGTAATGCTGTCTCTGTGTGTGTATAATGTA
ATAAGATAGAAGGTTCTGATATAGGGCGGCGTGTCTCTCGTTTACATGCC
AGTACAGCGGGCCGTAAGCGGAAGCGCCGGGCGGGGAAGCGGGCAGTGCA
TGTGAGCCGGCACTCCAGCAAATGCAAGATTATGCTCATCGCTACCTGTC
CCTTTCCTCTTTCGACTCAATAAAAAAGACCTCCACGCACGGCATTACTG
AGGACGATAACCCACTCCTCATGTCGACCAGCCTGGCCAGCAACCAAGAA
GGAGTCCTAGGGTTTGCCTCCGGGCTCGTCGCCGGGGTAATAGGGGTCTT
GACAGGCTATCCTCTCGACACATTGAAGGTCAAAATGCAAGTATACGGCT
CGGGGGCTCAGGTCTCTTTACTGGATGGAAGCGCAGGGCGGAACCCGTTC
AAAGTTGTGAGGCAACTTTTTCGGGGAGTCTTACCCCCGCTGGCCAGCAC
CGGTAAGGGAGGACGGGGGTCACATCAAAGGGAGGCGTTTTGTTTGAGCT
TTTATCAGGGATGACATTATTTCATATAAAGGGGCTACGGAGGTGTGGAC
ATGGGACTACCAGAATTCGGAGGCAGGTGTCTCATTTCTTCATTCCATCT
CTTCCCTCCATCGCTTCCTCCCTACTTATGATTTCTAGGCCTGGTTCAAA
CGCTCAACTTCGGCGTTTACGATAACACCTTGCGATACCTTCGAGCCCAA
CGAGATCTAGAAGTGAAGGCTCAAGATGCCGCTGCTTCCGCTGCTGCTTG
TGCTTGTGTTCCTTGCGCTACTATTGTAAATGGCAACACACTCTCCGATT
ACTTTCTGGCTGGGTCTATGGGGGGCGCGGCGATCAGTGTGATCACCTGC
CCGGCGTCGTTGGTGAAGATACAGGTGCAGACAGCGACTAACAGTAGCGT
TACATACTGGAGCATCTTGGCGGGTATGCGGCGGAAGGGGCTGGTGGCGG
GGTATTATCGGTGAGGGGGGAGGGAGAGAGGGAGGGAGGGAAGGGTGGGG
TGGCTCTGTCGACTACCAATGTCTAAGCTTCATGTCCTTCGGTTTCTTTC
TCTTTCAATCTATCCAGTGCATTCCTTCCCGATATTCTCAACCAAATGTG
CGGCCGTGGCGTGTATATGTGCACCTACGAAGGACTCAAGCGCGTTATGC
GTCCACCAACTGCCTCCTCCGCCGGCTCTGGCCTCCCCCTTCTCCTCCAC
CACCAGCAGCAGCAAATGCAGCCACAAATGCAGTCTCAGCCCCTTTATCA
ACGTATTGTAGCCGGTGCACTTGCAGGGATCTGTGGCTGGCTGGTCATTT
ACCCTTTGGATGTAATAAAAAGTAGGCTACAAGCGGACGCGTTGGCCCCA
GGACACAACAAGTACACCGGCATGACCGACTGTTTCCGAGTCAGCTATGG
ACAGGGTGGCATCCGTTCCCTTTATTCAGGCCTAGGATTTACTTTGCTAA
GGGCCGTGCCTGTCGCCAGTGTAATTTTGCCTTGTTACGATGCGACGTAT
TTTTTGCTGTCGCGGTATATGGACGAGTAGGCAGGGAGGGAGAAAAGGGT
AGGGAGTTGGCTTGTGAGGTGTGGGGGAGAGTGTGTAGTTAGCCAAAGGG
AAACGTGATAGAATGGACCATCACAAATATGATGTATTTGGCCACCACTT
GATGCATGTAAAGTATGTAACAAATAAAGGGAGTCTGGATTTGTGG back to topCoding sequence (CDS) from alignment at scaffold_30:238899..240844+ >mRNA_9028 ID=mRNA_9028|Name=jgi.p|Nanoce1779_2|604974|organism=Nannochloropsis oceanica|type=CDS|length=4416bp|location=Sequence derived from alignment at scaffold_30:238899..240844+ (Nannochloropsis oceanica) ATGACAAGAGTTGTGGCTGGCGAGCTGGATGTGGTCAGCAAGGTGACCTC CACGCACGGCATTACTGAGGACGATAACCCACTCCTCATGTCGACCAGCC TGGCCAGCAACCAAGAAGGAGTCCTAGGGTTTGCCTCCGGGCTCGTCGCC GGGGTAATAGGGGTCTTGACAGGCTATCCTCTCGACACATTGAAGGTCAA AATGCAAGTATACGGCTCGGGGGCTCAGGTCTCTTTACTGGATGGAAGCG CAGGGCGGAACCCGTTCAAAGTTGTGAGGCAACTTTTTCGGGGAGTCTTA CCCCCGCTGGCCAGCACCGGCCTGGTTCAAACGCTCAACTTCGGCGTTTA CGATAACACCTTGCGATACCTTCGAGCCCAACGAGATCTAGAAGTGAAGG CTCAAGATGCCGCTGCTTCCGCTGCTGCTTGTGCTTGTGTTCCTTGCGCT ACTATTGTAAATGGCAACACACTCTCCGATTACTTTCTGGCTGGGTCTAT GGGGGGCGCGGCGATCAGTGTGATCACCTGCCCGGCGTCGTTGGTGAAGA TACAGGTGCAGACAGCGACTAACAGTAGCGTTACATACTGGAGCATCTTG GCGGGTATGCGGCGGAAGGGGCTGGTGGCGGGGTATTATCGTGCATTCCT TCCCGATATTCTCAACCAAATGTGCGGCCGTGGCGTGTATATGTGCACCT ACGAAGGACTCAAGCGCGTTATGCGTCCACCAACTGCCTCCTCCGCCGGC TCTGGCCTCCCCCTTCTCCTCCACCACCAGCAGCAGCAAATGCAGCCACA AATGCAGTCTCAGCCCCTTTATCAACGTATTGTAGCCGGTGCACTTGCAG GGATCTGTGGCTGGCTGGTCATTTACCCTTTGGATGTAATAAAAAGTAGG CTACAAGCGGACGCGTTGGCCCCAGGACACAACAAGTACACCGGCATGAC CGACTGTTTCCGAGTCAGCTATGGACAGGGTGGCATCCGTTCCCTTTATT CAGGCCTAGGATTTACTTTGCTAAGGGCCGTGCCTGTCGCCAGTGTAATT TTGCCTTGTTACGATGCGACGTATTTTTTGCTGTCGCGGTATATGGACGA GTAGATGACAAGAGTTGTGGCTGGCGAGCTGGATGTGGTCAGCAAGGTGA CCTCCACGCACGGCATTACTGAGGACGATAACCCACTCCTCATGTCGACC AGCCTGGCCAGCAACCAAGAAGGAGTCCTAGGGTTTGCCTCCGGGCTCGT CGCCGGGGTAATAGGGGTCTTGACAGGCTATCCTCTCGACACATTGAAGG TCAAAATGCAAGTATACGGCTCGGGGGCTCAGGTCTCTTTACTGGATGGA AGCGCAGGGCGGAACCCGTTCAAAGTTGTGAGGCAACTTTTTCGGGGAGT CTTACCCCCGCTGGCCAGCACCGGCCTGGTTCAAACGCTCAACTTCGGCG TTTACGATAACACCTTGCGATACCTTCGAGCCCAACGAGATCTAGAAGTG AAGGCTCAAGATGCCGCTGCTTCCGCTGCTGCTTGTGCTTGTGTTCCTTG CGCTACTATTGTAAATGGCAACACACTCTCCGATTACTTTCTGGCTGGGT CTATGGGGGGCGCGGCGATCAGTGTGATCACCTGCCCGGCGTCGTTGGTG AAGATACAGGTGCAGACAGCGACTAACAGTAGCGTTACATACTGGAGCAT CTTGGCGGGTATGCGGCGGAAGGGGCTGGTGGCGGGGTATTATCGTGCAT TCCTTCCCGATATTCTCAACCAAATGTGCGGCCGTGGCGTGTATATGTGC ACCTACGAAGGACTCAAGCGCGTTATGCGTCCACCAACTGCCTCCTCCGC CGGCTCTGGCCTCCCCCTTCTCCTCCACCACCAGCAGCAGCAAATGCAGC CACAAATGCAGTCTCAGCCCCTTTATCAACGTATTGTAGCCGGTGCACTT GCAGGGATCTGTGGCTGGCTGGTCATTTACCCTTTGGATGTAATAAAAAG TAGGCTACAAGCGGACGCGTTGGCCCCAGGACACAACAAGTACACCGGCA TGACCGACTGTTTCCGAGTCAGCTATGGACAGGGTGGCATCCGTTCCCTT TATTCAGGCCTAGGATTTACTTTGCTAAGGGCCGTGCCTGTCGCCAGTGT AATTTTGCCTTGTTACGATGCGACGTATTTTTTGCTGTCGCGGTATATGG ACGAGTAGATGACAAGAGTTGTGGCTGGCGAGCTGGATGTGGTCAGCAAG GTGACCTCCACGCACGGCATTACTGAGGACGATAACCCACTCCTCATGTC GACCAGCCTGGCCAGCAACCAAGAAGGAGTCCTAGGGTTTGCCTCCGGGC TCGTCGCCGGGGTAATAGGGGTCTTGACAGGCTATCCTCTCGACACATTG AAGGTCAAAATGCAAGTATACGGCTCGGGGGCTCAGGTCTCTTTACTGGA TGGAAGCGCAGGGCGGAACCCGTTCAAAGTTGTGAGGCAACTTTTTCGGG GAGTCTTACCCCCGCTGGCCAGCACCGGCCTGGTTCAAACGCTCAACTTC GGCGTTTACGATAACACCTTGCGATACCTTCGAGCCCAACGAGATCTAGA AGTGAAGGCTCAAGATGCCGCTGCTTCCGCTGCTGCTTGTGCTTGTGTTC CTTGCGCTACTATTGTAAATGGCAACACACTCTCCGATTACTTTCTGGCT GGGTCTATGGGGGGCGCGGCGATCAGTGTGATCACCTGCCCGGCGTCGTT GGTGAAGATACAGGTGCAGACAGCGACTAACAGTAGCGTTACATACTGGA GCATCTTGGCGGGTATGCGGCGGAAGGGGCTGGTGGCGGGGTATTATCGT GCATTCCTTCCCGATATTCTCAACCAAATGTGCGGCCGTGGCGTGTATAT GTGCACCTACGAAGGACTCAAGCGCGTTATGCGTCCACCAACTGCCTCCT CCGCCGGCTCTGGCCTCCCCCTTCTCCTCCACCACCAGCAGCAGCAAATG CAGCCACAAATGCAGTCTCAGCCCCTTTATCAACGTATTGTAGCCGGTGC ACTTGCAGGGATCTGTGGCTGGCTGGTCATTTACCCTTTGGATGTAATAA AAAGTAGGCTACAAGCGGACGCGTTGGCCCCAGGACACAACAAGTACACC GGCATGACCGACTGTTTCCGAGTCAGCTATGGACAGGGTGGCATCCGTTC CCTTTATTCAGGCCTAGGATTTACTTTGCTAAGGGCCGTGCCTGTCGCCA GTGTAATTTTGCCTTGTTACGATGCGACGTATTTTTTGCTGTCGCGGTAT ATGGACGAGTAGATGACAAGAGTTGTGGCTGGCGAGCTGGATGTGGTCAG CAAGGTGACCTCCACGCACGGCATTACTGAGGACGATAACCCACTCCTCA TGTCGACCAGCCTGGCCAGCAACCAAGAAGGAGTCCTAGGGTTTGCCTCC GGGCTCGTCGCCGGGGTAATAGGGGTCTTGACAGGCTATCCTCTCGACAC ATTGAAGGTCAAAATGCAAGTATACGGCTCGGGGGCTCAGGTCTCTTTAC TGGATGGAAGCGCAGGGCGGAACCCGTTCAAAGTTGTGAGGCAACTTTTT CGGGGAGTCTTACCCCCGCTGGCCAGCACCGGCCTGGTTCAAACGCTCAA CTTCGGCGTTTACGATAACACCTTGCGATACCTTCGAGCCCAACGAGATC TAGAAGTGAAGGCTCAAGATGCCGCTGCTTCCGCTGCTGCTTGTGCTTGT GTTCCTTGCGCTACTATTGTAAATGGCAACACACTCTCCGATTACTTTCT GGCTGGGTCTATGGGGGGCGCGGCGATCAGTGTGATCACCTGCCCGGCGT CGTTGGTGAAGATACAGGTGCAGACAGCGACTAACAGTAGCGTTACATAC TGGAGCATCTTGGCGGGTATGCGGCGGAAGGGGCTGGTGGCGGGGTATTA TCGTGCATTCCTTCCCGATATTCTCAACCAAATGTGCGGCCGTGGCGTGT ATATGTGCACCTACGAAGGACTCAAGCGCGTTATGCGTCCACCAACTGCC TCCTCCGCCGGCTCTGGCCTCCCCCTTCTCCTCCACCACCAGCAGCAGCA AATGCAGCCACAAATGCAGTCTCAGCCCCTTTATCAACGTATTGTAGCCG GTGCACTTGCAGGGATCTGTGGCTGGCTGGTCATTTACCCTTTGGATGTA ATAAAAAGTAGGCTACAAGCGGACGCGTTGGCCCCAGGACACAACAAGTA CACCGGCATGACCGACTGTTTCCGAGTCAGCTATGGACAGGGTGGCATCC GTTCCCTTTATTCAGGCCTAGGATTTACTTTGCTAAGGGCCGTGCCTGTC GCCAGTGTAATTTTGCCTTGTTACGATGCGACGTATTTTTTGCTGTCGCG GTATATGGACGAGTAG back to top
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