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Properties
Property Name | Value |
TranscriptId | 606088 |
Track | FilteredModels2 |
ProteinId | 606002 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_33 | supercontig | scaffold_33:210311..213055 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9289 ID=mRNA_9289|Name=jgi.p|Nanoce1779_2|606002|organism=Nannochloropsis oceanica|type=mRNA|length=983bp ACGACCTCGACTCCGACCCGGCTCTGAACGAGGAGGAGAAAGCGGAGGAG GAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGAGAGGAGGGC TCGTCCCCCCACTGCCGCTCAGCAGAAAGCAGCGCTGGCTCTGCCGGTGA TGGAGGAGGAGGAGCTCCAGGCCGTCGACAAGGACGCTCTCAAGTACCGC ATCAACCTACTGGAGCAGGAGCGGGACCGCCTGCGCGAGAATGTGAACAT GCGGGCTCTCGTGGAGTACCGGCAGAAGGAGAAAGAGTACAAGAAGCGCT TGGCCGAGCTCGACACGGCCACTGACGTCCGGAACGAGGCCCGCAAACGT TATGATGACCTCCGACGACAGCGCCTGGAGGAGTTCATGGCTGGCTTCGC GGAGATCACCTTGAAGCTCAAGGAGATGTATCAGATGCTGACATTGGGGG GAGACGCCGAGCTCGAGCTCGTGGACTCCCTCGACCCCTTCTCCGAGGGC ATTGTATTCTCCGTCCGCCCTCCCAAGAAGAGCTGGAAGAATATTTCGAA CCTCTCAGGGGGGGAGAAGACGCTCTCATCCCTCGCCCTTGTTTTTCGCG TTGCATCACTACAAATCGACGCGGCCCTCGACTACCGGAACGTCGCCATC TGCGCCAACTACCTTAAGCAACGAACCAAGGACGCTCAATTCATCATCAT TTCTCTGCGAAGTGAAATGTTCGAGCTTGCCGACCGTCTCATCGGCATCT ACAAGTGCCTCAACGCCACTAACTCCCTGACTATCAATCCTCGCAAGTTC GTTCGAAGCGAGGAGCCGACGGCGATGGCCCCCCTTGTGGACCGCACCAA CAGCAGCTAAGACACCCTCCCGGGCCAAGAGGAAGGGAGGAGGGAGGGAG GGAAGGAGGGAAGGAGGGAAGGAGAGCGGGTAGGTCTAGGGAAATCGTGT GATGTGTACTGGTGTTTCTTGTCCTTACTGCTG back to topprotein sequence of jgi.p|Nanoce1779_2|606002 >mRNA_9289-protein ID=mRNA_9289-protein|Name=jgi.p|Nanoce1779_2|606002|organism=Nannochloropsis oceanica|type=polypeptide|length=237bp MEEEELQAVDKDALKYRINLLEQERDRLRENVNMRALVEYRQKEKEYKKR LAELDTATDVRNEARKRYDDLRRQRLEEFMAGFAEITLKLKEMYQMLTLG GDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFR VASLQIDAALDYRNVAICANYLKQRTKDAQFIIISLRSEMFELADRLIGI YKCLNATNSLTINPRKFVRSEEPTAMAPLVDRTNSS* back to topmRNA from alignment at scaffold_33:210311..213055- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9289 ID=mRNA_9289|Name=jgi.p|Nanoce1779_2|606002|organism=Nannochloropsis oceanica|type=mRNA|length=2745bp|location=Sequence derived from alignment at scaffold_33:210311..213055- (Nannochloropsis oceanica) ACGACCTCGACTCCGACCCGGCTCTGAACGAGGAGGAGAAAGCGGAGGAG
GAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGAGAGGAGGGG
TAAGTGCACCACGAAAGGACAATGCGAGGCCAGACACTCTTTTTTCCAGG
GCTTCTCGTTTCCTCCCCTCCCTCCCTCCCTTCCTCCTCCCTCCCTTCCT
CCTTTCCACCCGCACTCAACACGTGTCCCCTTTACTCTCTTCCTCCCTCC
CTCCCTCCCTCCTTCCCTCCAGCTCGTCCCCCCACTGCCGCTCAGCAGAA
AGCAGCGCTGGCTCTGCCGGTGATGGAGGAGGAGGAGCTCCAGGCCGTCG
ACAAGGACGCTCTCAAGTACCGCATCAACCTACTGGAGCAGGTAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGACGGCTTCATTTCATTCCATCATGGGAAGAGTCCGGAAGTTGTGTTA
AAAAAAAGGGGCGTCAGAGTGACGGGGCGAGGAGAGAATACGATGAAGAG
GGAGGGGAGGGAAGAGGGAGGTATGGGTTGTTCCGCGTGCCGCTCATCAC
ACCCCACCCCCCTGCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCC
AGGAGCGGGACCGCCTGCGCGAGAATGTGAACATGCGGGCTCTCGTGGAG
TACCGGCAGAAGGAGAAAGAGTACAAGAAGCGCTTGGCCGAGCTCGACAC
GGCCACTGACGTCCGGTACGTTAACAAGTGACTCCGCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGTATGTCAA
CACTTCTGTTCCGCTCACCTCGACTCCCTCCCCCCCTCCCCCCCTTCATA
GGAACGAGGCCCGCAAACGTTATGATGACCTCCGACGACAGCGCCTGGAG
GAGTTCATGGCTGGTACGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCT
TTCCGTCCTCCTTCCCTCCTTCCTTTCCTCCTTCATTTTCTCCCTCCTAT
CCTCCCTCCCTCCCTCCCTCCCTCCCTCTGGGCCCCAACTCCACTGCCTT
ACGTTTTCATGTTTTCTCGTTTTCTCGCTTCTCGATCGTAGTCGTCTAGT
AACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGCTTCGCG
GAGATCACCTTGAAGCTCAAGGAGATGTATCAGATGCTGACATTGGGGGG
AGACGCCGAGCTCGAGCTCGTGGACTCCCTCGACCCCTTCTCCGAGGGTA
CGTCCCTCCCTCCCTCCGCCGCTCCCTCCGCCCCTCCCTCCCTTTCTTTC
TTTATCCATCGTGTCTGCCTCTTCAAGCCCGTCATGCTGACACCAATATC
TCCCATGTACACCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTTTCTTC
CTCCACACAGGCATTGTATTCTCCGTCCGCCCTCCCAAGAAGAGCTGGAA
GAATATTTCGAACCTCTCAGGGGGGGAGAAGACGCTCTCATCCCTCGCCC
TTGTTTTTCGCGTTGCATCACTACAAGTGAGTCTCTCTCTCTCTCTCTCT
CTCTCTCCTCTCTCCTCTCTCTCTCTCTCTCCCTCTCTCCCTCCCCTTCT
CCCCCCCCCCCCCCCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTC
CCGCTGGCCCATATCTCCCTGTTCGCATCGGTCTCACCCTCCGCTTTCCT
CCCCCCCTCCCTCCCCCCCCTCCCTCAGGCCCACCCCTCTCTACGTTATG
GATGAGATCGACGCGGCCCTCGACTACCGGAACGTCGCCATCTGCGCCAA
CTACCTTAAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
CTTCTTGCCTGTCATTCTTTCTTCTTCGTTGCTGGAATGACGTCTCTTTT
TCCGCCTCTCGGTCTCTTCCTCCCCTCCTTCCTCTCAAACACTCTCTCAA
GAGTGAAATGATGATGGCCGCTCCCACCCTCTCCTAACCCTGCCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCAGCAACGAACCAAGGACGCTCAATTCATCATCATTTCTCTGCGAAG
TGAAATGTTCGAGCTTGCCGACCGTCTCATCGGCATCTACAAGTGCCTCA
ACGCCACTAAGTACGTCCTCCCTCCCTCCCTCCCTCCCTCTTTCCCCCGT
GTCATTTCGCTCGGATTAACCACCCATCGGTCACCGTCCTCTCTCCCTCT
CTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCAACAGCTCCCTGACTATCA
ATCCTCGCAAGTTCGTTCGAAGCGAGGAGGTAAGTCCCTCCCTCCCCCCC
CTCCTTCCCTCCCCCCCTCTCTCCCTCCCTCCCTGCCCGCATCATCCATC
CGGATCTGCTTTTCCTCGACCCAGCAACTTCTCCCTCCCTCCCTCCCTCC
TTCCCTCCCTCCCGCCCTCCCTCCCAGCCGACGGCGATGGCCCCCCTTGT
GGACCGCACCAACAGCAGCTAAGACACCCTCCCGGGCCAAGAGGAAGGGA
GGAGGGAGGGAGGGAAGGAGGGAAGGAGGGAAGGAGAGCGGGTAGGTCTA
GGGAAATCGTGTGATGTGTACTGGTGTTTCTTGTCCTTACTGCTG back to topCoding sequence (CDS) from alignment at scaffold_33:210311..213055- >mRNA_9289 ID=mRNA_9289|Name=jgi.p|Nanoce1779_2|606002|organism=Nannochloropsis oceanica|type=CDS|length=6399bp|location=Sequence derived from alignment at scaffold_33:210311..213055- (Nannochloropsis oceanica) CCGACGGCGATGGCCCCCCTTGTGGACCGCACCAACAGCAGCTAACTCCC TGACTATCAATCCTCGCAAGTTCGTTCGAAGCGAGGAGCAACGAACCAAG GACGCTCAATTCATCATCATTTCTCTGCGAAGTGAAATGTTCGAGCTTGC CGACCGTCTCATCGGCATCTACAAGTGCCTCAACGCCACTAAATCGACGC GGCCCTCGACTACCGGAACGTCGCCATCTGCGCCAACTACCTTAAGGCAT TGTATTCTCCGTCCGCCCTCCCAAGAAGAGCTGGAAGAATATTTCGAACC TCTCAGGGGGGGAGAAGACGCTCTCATCCCTCGCCCTTGTTTTTCGCGTT GCATCACTACAAGCTTCGCGGAGATCACCTTGAAGCTCAAGGAGATGTAT CAGATGCTGACATTGGGGGGAGACGCCGAGCTCGAGCTCGTGGACTCCCT CGACCCCTTCTCCGAGGGAACGAGGCCCGCAAACGTTATGATGACCTCCG ACGACAGCGCCTGGAGGAGTTCATGGCTGGAGCGGGACCGCCTGCGCGAG AATGTGAACATGCGGGCTCTCGTGGAGTACCGGCAGAAGGAGAAAGAGTA CAAGAAGCGCTTGGCCGAGCTCGACACGGCCACTGACGTCCGATGGAGGA GGAGGAGCTCCAGGCCGTCGACAAGGACGCTCTCAAGTACCGCATCAACC TACTGGAGCAGCCGACGGCGATGGCCCCCCTTGTGGACCGCACCAACAGC AGCTAACTCCCTGACTATCAATCCTCGCAAGTTCGTTCGAAGCGAGGAGC AACGAACCAAGGACGCTCAATTCATCATCATTTCTCTGCGAAGTGAAATG TTCGAGCTTGCCGACCGTCTCATCGGCATCTACAAGTGCCTCAACGCCAC TAAATCGACGCGGCCCTCGACTACCGGAACGTCGCCATCTGCGCCAACTA CCTTAAGGCATTGTATTCTCCGTCCGCCCTCCCAAGAAGAGCTGGAAGAA TATTTCGAACCTCTCAGGGGGGGAGAAGACGCTCTCATCCCTCGCCCTTG TTTTTCGCGTTGCATCACTACAAGCTTCGCGGAGATCACCTTGAAGCTCA AGGAGATGTATCAGATGCTGACATTGGGGGGAGACGCCGAGCTCGAGCTC GTGGACTCCCTCGACCCCTTCTCCGAGGGAACGAGGCCCGCAAACGTTAT GATGACCTCCGACGACAGCGCCTGGAGGAGTTCATGGCTGGAGCGGGACC GCCTGCGCGAGAATGTGAACATGCGGGCTCTCGTGGAGTACCGGCAGAAG GAGAAAGAGTACAAGAAGCGCTTGGCCGAGCTCGACACGGCCACTGACGT CCGATGGAGGAGGAGGAGCTCCAGGCCGTCGACAAGGACGCTCTCAAGTA CCGCATCAACCTACTGGAGCAGCCGACGGCGATGGCCCCCCTTGTGGACC GCACCAACAGCAGCTAACTCCCTGACTATCAATCCTCGCAAGTTCGTTCG AAGCGAGGAGCAACGAACCAAGGACGCTCAATTCATCATCATTTCTCTGC GAAGTGAAATGTTCGAGCTTGCCGACCGTCTCATCGGCATCTACAAGTGC CTCAACGCCACTAAATCGACGCGGCCCTCGACTACCGGAACGTCGCCATC TGCGCCAACTACCTTAAGGCATTGTATTCTCCGTCCGCCCTCCCAAGAAG AGCTGGAAGAATATTTCGAACCTCTCAGGGGGGGAGAAGACGCTCTCATC CCTCGCCCTTGTTTTTCGCGTTGCATCACTACAAGCTTCGCGGAGATCAC CTTGAAGCTCAAGGAGATGTATCAGATGCTGACATTGGGGGGAGACGCCG AGCTCGAGCTCGTGGACTCCCTCGACCCCTTCTCCGAGGGAACGAGGCCC GCAAACGTTATGATGACCTCCGACGACAGCGCCTGGAGGAGTTCATGGCT GGAGCGGGACCGCCTGCGCGAGAATGTGAACATGCGGGCTCTCGTGGAGT ACCGGCAGAAGGAGAAAGAGTACAAGAAGCGCTTGGCCGAGCTCGACACG GCCACTGACGTCCGATGGAGGAGGAGGAGCTCCAGGCCGTCGACAAGGAC GCTCTCAAGTACCGCATCAACCTACTGGAGCAGCCGACGGCGATGGCCCC CCTTGTGGACCGCACCAACAGCAGCTAACTCCCTGACTATCAATCCTCGC AAGTTCGTTCGAAGCGAGGAGCAACGAACCAAGGACGCTCAATTCATCAT CATTTCTCTGCGAAGTGAAATGTTCGAGCTTGCCGACCGTCTCATCGGCA TCTACAAGTGCCTCAACGCCACTAAATCGACGCGGCCCTCGACTACCGGA ACGTCGCCATCTGCGCCAACTACCTTAAGGCATTGTATTCTCCGTCCGCC CTCCCAAGAAGAGCTGGAAGAATATTTCGAACCTCTCAGGGGGGGAGAAG ACGCTCTCATCCCTCGCCCTTGTTTTTCGCGTTGCATCACTACAAGCTTC GCGGAGATCACCTTGAAGCTCAAGGAGATGTATCAGATGCTGACATTGGG GGGAGACGCCGAGCTCGAGCTCGTGGACTCCCTCGACCCCTTCTCCGAGG GAACGAGGCCCGCAAACGTTATGATGACCTCCGACGACAGCGCCTGGAGG AGTTCATGGCTGGAGCGGGACCGCCTGCGCGAGAATGTGAACATGCGGGC TCTCGTGGAGTACCGGCAGAAGGAGAAAGAGTACAAGAAGCGCTTGGCCG AGCTCGACACGGCCACTGACGTCCGATGGAGGAGGAGGAGCTCCAGGCCG TCGACAAGGACGCTCTCAAGTACCGCATCAACCTACTGGAGCAGCCGACG GCGATGGCCCCCCTTGTGGACCGCACCAACAGCAGCTAACTCCCTGACTA TCAATCCTCGCAAGTTCGTTCGAAGCGAGGAGCAACGAACCAAGGACGCT CAATTCATCATCATTTCTCTGCGAAGTGAAATGTTCGAGCTTGCCGACCG TCTCATCGGCATCTACAAGTGCCTCAACGCCACTAAATCGACGCGGCCCT CGACTACCGGAACGTCGCCATCTGCGCCAACTACCTTAAGGCATTGTATT CTCCGTCCGCCCTCCCAAGAAGAGCTGGAAGAATATTTCGAACCTCTCAG GGGGGGAGAAGACGCTCTCATCCCTCGCCCTTGTTTTTCGCGTTGCATCA CTACAAGCTTCGCGGAGATCACCTTGAAGCTCAAGGAGATGTATCAGATG CTGACATTGGGGGGAGACGCCGAGCTCGAGCTCGTGGACTCCCTCGACCC CTTCTCCGAGGGAACGAGGCCCGCAAACGTTATGATGACCTCCGACGACA GCGCCTGGAGGAGTTCATGGCTGGAGCGGGACCGCCTGCGCGAGAATGTG AACATGCGGGCTCTCGTGGAGTACCGGCAGAAGGAGAAAGAGTACAAGAA GCGCTTGGCCGAGCTCGACACGGCCACTGACGTCCGATGGAGGAGGAGGA GCTCCAGGCCGTCGACAAGGACGCTCTCAAGTACCGCATCAACCTACTGG AGCAGCCGACGGCGATGGCCCCCCTTGTGGACCGCACCAACAGCAGCTAA CTCCCTGACTATCAATCCTCGCAAGTTCGTTCGAAGCGAGGAGCAACGAA CCAAGGACGCTCAATTCATCATCATTTCTCTGCGAAGTGAAATGTTCGAG CTTGCCGACCGTCTCATCGGCATCTACAAGTGCCTCAACGCCACTAAATC GACGCGGCCCTCGACTACCGGAACGTCGCCATCTGCGCCAACTACCTTAA GGCATTGTATTCTCCGTCCGCCCTCCCAAGAAGAGCTGGAAGAATATTTC GAACCTCTCAGGGGGGGAGAAGACGCTCTCATCCCTCGCCCTTGTTTTTC GCGTTGCATCACTACAAGCTTCGCGGAGATCACCTTGAAGCTCAAGGAGA TGTATCAGATGCTGACATTGGGGGGAGACGCCGAGCTCGAGCTCGTGGAC TCCCTCGACCCCTTCTCCGAGGGAACGAGGCCCGCAAACGTTATGATGAC CTCCGACGACAGCGCCTGGAGGAGTTCATGGCTGGAGCGGGACCGCCTGC GCGAGAATGTGAACATGCGGGCTCTCGTGGAGTACCGGCAGAAGGAGAAA GAGTACAAGAAGCGCTTGGCCGAGCTCGACACGGCCACTGACGTCCGATG GAGGAGGAGGAGCTCCAGGCCGTCGACAAGGACGCTCTCAAGTACCGCAT CAACCTACTGGAGCAGCCGACGGCGATGGCCCCCCTTGTGGACCGCACCA ACAGCAGCTAACTCCCTGACTATCAATCCTCGCAAGTTCGTTCGAAGCGA GGAGCAACGAACCAAGGACGCTCAATTCATCATCATTTCTCTGCGAAGTG AAATGTTCGAGCTTGCCGACCGTCTCATCGGCATCTACAAGTGCCTCAAC GCCACTAAATCGACGCGGCCCTCGACTACCGGAACGTCGCCATCTGCGCC AACTACCTTAAGGCATTGTATTCTCCGTCCGCCCTCCCAAGAAGAGCTGG AAGAATATTTCGAACCTCTCAGGGGGGGAGAAGACGCTCTCATCCCTCGC CCTTGTTTTTCGCGTTGCATCACTACAAGCTTCGCGGAGATCACCTTGAA GCTCAAGGAGATGTATCAGATGCTGACATTGGGGGGAGACGCCGAGCTCG AGCTCGTGGACTCCCTCGACCCCTTCTCCGAGGGAACGAGGCCCGCAAAC GTTATGATGACCTCCGACGACAGCGCCTGGAGGAGTTCATGGCTGGAGCG GGACCGCCTGCGCGAGAATGTGAACATGCGGGCTCTCGTGGAGTACCGGC AGAAGGAGAAAGAGTACAAGAAGCGCTTGGCCGAGCTCGACACGGCCACT GACGTCCGATGGAGGAGGAGGAGCTCCAGGCCGTCGACAAGGACGCTCTC AAGTACCGCATCAACCTACTGGAGCAGCCGACGGCGATGGCCCCCCTTGT GGACCGCACCAACAGCAGCTAACTCCCTGACTATCAATCCTCGCAAGTTC GTTCGAAGCGAGGAGCAACGAACCAAGGACGCTCAATTCATCATCATTTC TCTGCGAAGTGAAATGTTCGAGCTTGCCGACCGTCTCATCGGCATCTACA AGTGCCTCAACGCCACTAAATCGACGCGGCCCTCGACTACCGGAACGTCG CCATCTGCGCCAACTACCTTAAGGCATTGTATTCTCCGTCCGCCCTCCCA AGAAGAGCTGGAAGAATATTTCGAACCTCTCAGGGGGGGAGAAGACGCTC TCATCCCTCGCCCTTGTTTTTCGCGTTGCATCACTACAAGCTTCGCGGAG ATCACCTTGAAGCTCAAGGAGATGTATCAGATGCTGACATTGGGGGGAGA CGCCGAGCTCGAGCTCGTGGACTCCCTCGACCCCTTCTCCGAGGGAACGA GGCCCGCAAACGTTATGATGACCTCCGACGACAGCGCCTGGAGGAGTTCA TGGCTGGAGCGGGACCGCCTGCGCGAGAATGTGAACATGCGGGCTCTCGT GGAGTACCGGCAGAAGGAGAAAGAGTACAAGAAGCGCTTGGCCGAGCTCG ACACGGCCACTGACGTCCGATGGAGGAGGAGGAGCTCCAGGCCGTCGACA AGGACGCTCTCAAGTACCGCATCAACCTACTGGAGCAGCCGACGGCGATG GCCCCCCTTGTGGACCGCACCAACAGCAGCTAACTCCCTGACTATCAATC CTCGCAAGTTCGTTCGAAGCGAGGAGCAACGAACCAAGGACGCTCAATTC ATCATCATTTCTCTGCGAAGTGAAATGTTCGAGCTTGCCGACCGTCTCAT CGGCATCTACAAGTGCCTCAACGCCACTAAATCGACGCGGCCCTCGACTA CCGGAACGTCGCCATCTGCGCCAACTACCTTAAGGCATTGTATTCTCCGT CCGCCCTCCCAAGAAGAGCTGGAAGAATATTTCGAACCTCTCAGGGGGGG AGAAGACGCTCTCATCCCTCGCCCTTGTTTTTCGCGTTGCATCACTACAA GCTTCGCGGAGATCACCTTGAAGCTCAAGGAGATGTATCAGATGCTGACA TTGGGGGGAGACGCCGAGCTCGAGCTCGTGGACTCCCTCGACCCCTTCTC CGAGGGAACGAGGCCCGCAAACGTTATGATGACCTCCGACGACAGCGCCT GGAGGAGTTCATGGCTGGAGCGGGACCGCCTGCGCGAGAATGTGAACATG CGGGCTCTCGTGGAGTACCGGCAGAAGGAGAAAGAGTACAAGAAGCGCTT GGCCGAGCTCGACACGGCCACTGACGTCCGATGGAGGAGGAGGAGCTCCA GGCCGTCGACAAGGACGCTCTCAAGTACCGCATCAACCTACTGGAGCAG back to top
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