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Properties
| Property Name | Value |
|---|
| TranscriptId | 607141 |
| Track | FilteredModels2 |
| ProteinId | 607055 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_37 | supercontig | scaffold_37:118603..122621 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9756 ID=mRNA_9756|Name=jgi.p|Nanoce1779_2|607055|organism=Nannochloropsis oceanica|type=mRNA|length=1419bp
ACATATCGTTTGTGGTGCCCGAAACGGTAGCTTACATATCGTTTGTGGTG
CCCGAAACGGTAGCTTACATATCGTTTGTGGTGCCCGAAGCGGGGAAGCA
AGCAAAAGTGTGCCGGGCCGGCAGTCTCACAACGGCACGCCACCATCATC
GTCATCAGACAACGCCGCAGCAAGCACCGGATCTCGAACTTAGCCTATGA
GGTATATTAGATCATACTTAATGCTCTTCTATCGCAAGTGACATGCTATC
TGCATCTGTTTCTTCCCTCCCCTCCCTGGTGGAGTGCATGGGCGAGATCC
AAGGCGCCCTCACCCTGCTCGAGACAGCCCAGCCTTCCTTCTCTACCTCC
GGCCCGTCTTCCAACGAGCACGACACGTTTACAGCCGCCAGGACTCTATT
TTACAATTTGACGATGCTGAATACGGTGCTAGAGCGAGTGGCAAAGGAAG
AACTGCTGCCGCTGGAGGCATTGCTGGTTCAGATTCTTAACGCCATTATC
GCCGCCAAACGCCTCCCCCTCTCCCCTCCCTTCCGCCAAAGTCTCGTCCG
TGCATACCTCACGCTCCTCCAGCAATCCACAACCTGCAATGCCCATGCCC
TCTCCAAAGACATGCAAACCCTCCTTCTCTCCTCGTCGAAAGGATCAACC
TCCTCCTCCTCCTCCTCCTCCTCCTCGACTACCTCCCCAGGCCCTCTCTC
TCCTCTGGCACGCGTCTGTGCCTGCGAAATTCTGTCTCTCGTCTTTCGGT
CCAAATTCGCCTCCAATCAGCTCTCTCCAGGGATGGTCTCTGACATCCTG
CCCTGCCTTCTCAAACAATTGAAATGGAGGGATGCCCGTGTGCGTGTGGC
AGCGCTACAGGCTCTGGCCGTGGCGGGAGCCGTGGGTGGAAAAGCAGATA
TTTTCAAGGCACAGTATCTCCTTCCCCTCCTCCCTTCCTCTCGCCTGCCC
TCCCTCTTTTCCTTTCCTTCTCCTCTTGAATCACTCGGGTACTCATTCGG
TCAACTTTTCCATTTCCCCTGCCACCCCTCTCTTCTTCCCCCCTCCCGTC
CTCCCTCTCTCCTGTTCCCAGGCGCTCACGCTCCTTTTTAATGCAGACAG
AGGGAACGACGTCCGGGGCGCAATGGCATGGTGCTTTATGTCCTTGATTC
GAAATGCCGAGGATTTCCGCCTCATCCCGATGGAGGCACTGATTGCTCTA
TGTCTCAAGGGGCTGGAAGATCCTGCCTCCTCCCTACAGGTCCAGCTGAT
ATGGGCCGAGACCATGGCGCACCTTCTGGCCGTGTCGGTGGCGGGGCAGG
CCCAGCACGCCCAAGCCAAGCTCGTGCGGGCTGCACGAGGGGGGCAAGGC
GAGGAGGAGGAAGGGGGAGGGGGAGGGGGAGGGAAGAGGGGGGCTGTCGA
GAAAAGCATTCGACCGGGC back to topprotein sequence of jgi.p|Nanoce1779_2|607055 >mRNA_9756-protein ID=mRNA_9756-protein|Name=jgi.p|Nanoce1779_2|607055|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MLSASVSSLPSLVECMGEIQGALTLLETAQPSFSTSGPSSNEHDTFTAAR
TLFYNLTMLNTVLERVAKEELLPLEALLVQILNAIIAAKRLPLSPPFRQS
LVRAYLTLLQQSTTCNAHALSKDMQTLLLSSSKGSTSSSSSSSSSTTSPG
PLSPLARVCACEILSLVFRSKFASNQLSPGMVSDILPCLLKQLKWRDARV
RVAALQALAVAGAVGGKADIFKAQYLLPLLPSSRLPSLFSFPSPLESLGY
SFGQLFHFPCHPSLLPPSRPPSLLFPGAHAPF* back to topmRNA from alignment at scaffold_37:118603..122621+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9756 ID=mRNA_9756|Name=jgi.p|Nanoce1779_2|607055|organism=Nannochloropsis oceanica|type=mRNA|length=4019bp|location=Sequence derived from alignment at scaffold_37:118603..122621+ (Nannochloropsis oceanica)
ACATATCGTTTGTGGTGCCCGAAACGGTAGCTTACATATCGTTTGTGGTG
ACATACGGTAGTATGATCATATAAGCCTGAAACAAATCTTATTTCCAGGT
GCACCATTAGGGAATACACATTATGCGATGTACAGACGCAAACCCTGATA
GCCCTGTCTTCACCTCATGTTGCACTATTGTGTAATGCAGATCTGACAAT
CCATCAGTCTTCCACCGATCGCTACCCTTCTTCATCTTATCTAGAAGAGC
AGTTGAATGCGCATATTCATCTTTCCCTTTTATACCCGATGGATGATGGA
CAAGTGACTGGTTGGTGGTCTTAAATCTTCCTGACCCCTTTGGAGGCCGA
CTCACACTCTTGTTGCCTTGGAGGAGACCATTGGTACGAACCCGCTCATA
CAAGTCGTCATCCTCGCCACCCCAACCTACATAATCGTTGCTGAAGCCGT
TCACTTCTCGCCACTGGTCCATGTGCATCGTCACGACGCCCCCAAAAGAG
TGTGGGTATGGTACCCTCCATTTAAAATGCTCCATTTCAGAGCTGAGCTG
AGAAGGCAGATTGCACTGGTTGTACGGGACTCCGTCTCGCTCGGGGAGAA
GGTCGACATCGTGGAATATGATACACTTACCATGCGGTTGTGCCAAACCA
ATCTGCACAATCCCGACATTGGCAAGCCACCCACGATTGAAGAGTTGATC
GTCTGCTTGCTCAATGATCCAGAGAGAGAATGAGTCGTTGGGAAAGTTCC
TCCGCAAATAAGGCCCCATTTCCTCCACGAAGCGCTCGAGATGATAGGAA
CGGTTTCGGTACGGGATAAGAAGTGCATGATCCGCGATGGAAGGCAATGA
ATTCTTGACAGTGAGGTTGGTGGCTTCATGAGACACTTCAGTAAAGTGGC
ATGGCGTTGCTTGCGTGCGCAAGGCGTCCTTATTGATAATTATCATGGCG
ACAATTGACCAAACAAATATCAATTGGATGGTAGGAAGTTTATCAATAGA
ATGTTTCCATATTCTTGTTTTAACTATGCAATGCATGACAGTGGAATAGC
GGGTCTTAGATAGAGCAGCTTGGGCGTGCAGGGTTGTGTGCCTGTTGTGT
ATTATGGACAAAGAGAGATTTGCGGAAAGGAAGAAGAATGGGGGAAGCAG
TTACACCAGCTTTGCCGTGGTCATGGGAGAGTAAGGCAAGAAAGGCATCA
TGTTGCTCAGCTCAGCTGTGGAAATGCGGTGGGGATGCTGTGGGGATGAA
ACGGTTACCCAGAGCTTCTGCCCCCTGCAGAGCTTTCCTACGAATGATTT
TTTCTTTGAGATAACTTACTCCATTTACCTTTCATCGTTGGAATCAGTTA
CTCCAAGCCACCATCTTTATATTAATATTAATACAATATAATAAATTACA
ATGATTATACTATTGTTATCATTATATTATTATTCGAGCGAGCGAGCGTA
ATCGCTCGCCAAAGACGCCACCAACGGCCTTTACATCAGATACCACCCAC
ACCTCATCCAACACATCCACGTGCAAGAGGACAGAACAAAACGGAAGCTT
ACATATCGTTTGTGGTGCCCGAAACGGTAGCTTACATATCGTTTGTGGTG
CCCGAAGCGGGGAAGCAAGCAAAAGTGTGCCGGGCCGGCAGTCTCACAAC
GGCACGCCACCATCATCGTCATCAGACAACGCCGCAGCAAGCACCGGATC
TCGAACTTAGCCTATGAGGTATATTAGATCATACTTAATGCTCTTCTATC
GCAAGGTATAGCTATATTTTAGATAGACACACACACAATTCGGCTGAATT
CTAAAGCTTTGTCGACAACAGATCATATCTGGCTGGAATTCGGAGACAGA
CACTAGAAGCCACCTACCTAGTCGGCCACCTACCTTCAAATCCACGTCCA
CCAATTCTTACGCATAATGTGTCAATCATTTCCTACACCCAATATAGTGA
CATGCTATCTGCATCTGTTTCTTCCCTCCCCTCCCTGGTGGAGTGCATGG
GCGAGATCCAAGGCGCCCTCACCCTGCTCGAGACAGCCCAGCCTTCCTTC
TCTACCTCCGGCCCGTCTTCCAACGAGCACGACACGTTTACAGCCGCCAG
GACTCTATTTTACAATTTGACGATGCTGAATACGGTGCTAGAGCGAGTGG
CAAAGGAAGAACTGCTGCCGCTGGAGGCATTGCTGGTTCAGGTAAAGGAA
TAAGGAAGAAGGGTTGGAAGGACAGGGTATCGAGGGCTTTATGCGAGAAA
CGAGTAGAATAAAAGCAGAGAAGGCAATGACATAATGGATACTCATTTTT
CATTACCTCTCCTCTAATACAACCTTTTCTGCCTTCCTCTCAGATTCTTA
ACGCCATTATCGCCGCCAAACGCCTCCCCCTCTCCCCTCCCTTCCGCCAA
AGTCTCGTCCGTGCATACCTCACGCTCCTCCAGCAATCCACAACCTGCAA
TGCCCATGCCCTCTCCAAAGACATGCAAACCCTCCTTCTCTCCTCGTCGA
AAGGATCAACCTCCTCCTCCTCCTCCTCCTCCTCCTCGACTACCTCCCCA
GGCCCTCTCTCTCCTCTGGCACGCGTCTGTGCCTGCGAAATTCTGTCTCT
CGTCTTTCGGTCCAAATTCGCCTCCAATCAGCTCTCTCCAGGGATGGTCT
CTGACATCCTGCCCTGCCTTCTCAAACAATTGAAATGTAAGGCTGCTCTC
CCTCGTGCCCTCCTTCCCTCCCTTCCTCCCTTTCTCCCTCCCTCTCCCTC
CCTCCGTCCCTCTCTCCTTCCTTCCTTCCCTCCCCTTCCCTTCCCTCTGT
CCCTCCCTTCCTTCTCTGGACTTCTCTGAATTCCTTCACCCATTCTTCGT
CCGATGAGAGAACGTGGTTTGCGTGTCACCCAAGCACTAGGGATGAAGCC
TCACGTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CTTTCCCATTCCCCGCTTTCTCTCGGGCAGGGAGGGATGCCCGTGTGCGT
GTGGCAGCGCTACAGGCTCTGGCCGTGGCGGGAGCCGTGGGTGGAAAAGC
AGATATTTTCAAGGCACAGTATCTCCTTCCCCTCCTCCCTTCCTCTCGCC
TGCCCTCCCTCTTTTCCTTTCCTTCTCCTCTTGAATCACTCGGGTACTCA
TTCGGTCAACTTTTCCATTTCCCCTGCCACCCCTCTCTTCTTCCCCCCTC
CCGTCCTCCCTCTCTCCTGTTCCCAGGCGCTCACGCTCCTTTTTAATGCA
GACAGAGGGAACGACGTCCGGGGCGCAATGGCATGGTGCTTTATGTCCTT
GATTCGAAATGCCGAGGATTTCCGCCTCATCCCGATGGAGGCACTGATTG
CTCTATGTCTCAAGGTACGCTTCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTTTTCCTCATCTCTATTGCTTGCTTGCATACATGCATGCGTGCAAG
GTTTAATGGCGTAAAAATACGAAATGTTGAAGGCAAACGATTTCTCCTCT
ATACTCTCTTTGCTTTTGCCCCGATGGTGGCATTGCCATCCTTACAGGGC
GTCTTCAGGTGCCTTCCTCCCTTCCCTCCCCCCCTTCCTCCATCGCCTGC
TTTCCACGTTTGGTCCCTCGTCTCACTCCTCCCATCGCCACTACCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAGGGGCTGGAAGA
TCCTGCCTCCTCCCTACAGGTCCAGCTGATATGGGCCGAGACCATGGCGC
ACCTTCTGGCCGTGTCGGTGGCGGGGCAGGTGGGTAGGGAGGGAGGGAGG
GAGGGAGGGATCGGGGATGTGAAGGGGTTGTTAGGTAGGTGGTGCGATCG
AAATAATGCTTCCCTCCCTCCTCCTTCCCTCCTCCCTCCCTCCCTGCAGG
CCCAGCACGCCCAAGCCAAGCTCGTGCGGGCTGCACGAGGGGGGCAAGGC
GAGGAGGAGGAAGGGGGAGGGGGAGGGGGAGGGAAGAGGGGGGCTGTCGA
GAAAAGCATTCGACCGGGC back to topCoding sequence (CDS) from alignment at scaffold_37:118603..122621+ >mRNA_9756 ID=mRNA_9756|Name=jgi.p|Nanoce1779_2|607055|organism=Nannochloropsis oceanica|type=CDS|length=2547bp|location=Sequence derived from alignment at scaffold_37:118603..122621+ (Nannochloropsis oceanica)
ATGCTATCTGCATCTGTTTCTTCCCTCCCCTCCCTGGTGGAGTGCATGGG
CGAGATCCAAGGCGCCCTCACCCTGCTCGAGACAGCCCAGCCTTCCTTCT
CTACCTCCGGCCCGTCTTCCAACGAGCACGACACGTTTACAGCCGCCAGG
ACTCTATTTTACAATTTGACGATGCTGAATACGGTGCTAGAGCGAGTGGC
AAAGGAAGAACTGCTGCCGCTGGAGGCATTGCTGGTTCAGATTCTTAACG
CCATTATCGCCGCCAAACGCCTCCCCCTCTCCCCTCCCTTCCGCCAAAGT
CTCGTCCGTGCATACCTCACGCTCCTCCAGCAATCCACAACCTGCAATGC
CCATGCCCTCTCCAAAGACATGCAAACCCTCCTTCTCTCCTCGTCGAAAG
GATCAACCTCCTCCTCCTCCTCCTCCTCCTCCTCGACTACCTCCCCAGGC
CCTCTCTCTCCTCTGGCACGCGTCTGTGCCTGCGAAATTCTGTCTCTCGT
CTTTCGGTCCAAATTCGCCTCCAATCAGCTCTCTCCAGGGATGGTCTCTG
ACATCCTGCCCTGCCTTCTCAAACAATTGAAATGGAGGGATGCCCGTGTG
CGTGTGGCAGCGCTACAGGCTCTGGCCGTGGCGGGAGCCGTGGGTGGAAA
AGCAGATATTTTCAAGGCACAGTATCTCCTTCCCCTCCTCCCTTCCTCTC
GCCTGCCCTCCCTCTTTTCCTTTCCTTCTCCTCTTGAATCACTCGGGTAC
TCATTCGGTCAACTTTTCCATTTCCCCTGCCACCCCTCTCTTCTTCCCCC
CTCCCGTCCTCCCTCTCTCCTGTTCCCAGGCGCTCACGCTCCTTTTTAAA
TGCTATCTGCATCTGTTTCTTCCCTCCCCTCCCTGGTGGAGTGCATGGGC
GAGATCCAAGGCGCCCTCACCCTGCTCGAGACAGCCCAGCCTTCCTTCTC
TACCTCCGGCCCGTCTTCCAACGAGCACGACACGTTTACAGCCGCCAGGA
CTCTATTTTACAATTTGACGATGCTGAATACGGTGCTAGAGCGAGTGGCA
AAGGAAGAACTGCTGCCGCTGGAGGCATTGCTGGTTCAGATTCTTAACGC
CATTATCGCCGCCAAACGCCTCCCCCTCTCCCCTCCCTTCCGCCAAAGTC
TCGTCCGTGCATACCTCACGCTCCTCCAGCAATCCACAACCTGCAATGCC
CATGCCCTCTCCAAAGACATGCAAACCCTCCTTCTCTCCTCGTCGAAAGG
ATCAACCTCCTCCTCCTCCTCCTCCTCCTCCTCGACTACCTCCCCAGGCC
CTCTCTCTCCTCTGGCACGCGTCTGTGCCTGCGAAATTCTGTCTCTCGTC
TTTCGGTCCAAATTCGCCTCCAATCAGCTCTCTCCAGGGATGGTCTCTGA
CATCCTGCCCTGCCTTCTCAAACAATTGAAATGGAGGGATGCCCGTGTGC
GTGTGGCAGCGCTACAGGCTCTGGCCGTGGCGGGAGCCGTGGGTGGAAAA
GCAGATATTTTCAAGGCACAGTATCTCCTTCCCCTCCTCCCTTCCTCTCG
CCTGCCCTCCCTCTTTTCCTTTCCTTCTCCTCTTGAATCACTCGGGTACT
CATTCGGTCAACTTTTCCATTTCCCCTGCCACCCCTCTCTTCTTCCCCCC
TCCCGTCCTCCCTCTCTCCTGTTCCCAGGCGCTCACGCTCCTTTTTAAAT
GCTATCTGCATCTGTTTCTTCCCTCCCCTCCCTGGTGGAGTGCATGGGCG
AGATCCAAGGCGCCCTCACCCTGCTCGAGACAGCCCAGCCTTCCTTCTCT
ACCTCCGGCCCGTCTTCCAACGAGCACGACACGTTTACAGCCGCCAGGAC
TCTATTTTACAATTTGACGATGCTGAATACGGTGCTAGAGCGAGTGGCAA
AGGAAGAACTGCTGCCGCTGGAGGCATTGCTGGTTCAGATTCTTAACGCC
ATTATCGCCGCCAAACGCCTCCCCCTCTCCCCTCCCTTCCGCCAAAGTCT
CGTCCGTGCATACCTCACGCTCCTCCAGCAATCCACAACCTGCAATGCCC
ATGCCCTCTCCAAAGACATGCAAACCCTCCTTCTCTCCTCGTCGAAAGGA
TCAACCTCCTCCTCCTCCTCCTCCTCCTCCTCGACTACCTCCCCAGGCCC
TCTCTCTCCTCTGGCACGCGTCTGTGCCTGCGAAATTCTGTCTCTCGTCT
TTCGGTCCAAATTCGCCTCCAATCAGCTCTCTCCAGGGATGGTCTCTGAC
ATCCTGCCCTGCCTTCTCAAACAATTGAAATGGAGGGATGCCCGTGTGCG
TGTGGCAGCGCTACAGGCTCTGGCCGTGGCGGGAGCCGTGGGTGGAAAAG
CAGATATTTTCAAGGCACAGTATCTCCTTCCCCTCCTCCCTTCCTCTCGC
CTGCCCTCCCTCTTTTCCTTTCCTTCTCCTCTTGAATCACTCGGGTACTC
ATTCGGTCAACTTTTCCATTTCCCCTGCCACCCCTCTCTTCTTCCCCCCT
CCCGTCCTCCCTCTCTCCTGTTCCCAGGCGCTCACGCTCCTTTTTAA back to top
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