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Properties
| Property Name | Value |
|---|
| TranscriptId | 582600 |
| Track | FilteredModels2 |
| ProteinId | 582514 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:600982..603090 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3537 ID=mRNA_3537|Name=jgi.p|Nanoce1779_2|582514|organism=Nannochloropsis oceanica|type=mRNA|length=1479bp
ACAGGCAGTACAAATATGCCCAAACATCGAGGCGTCAGCGTCTGTGCTGG
GCGTGGTGAGGTGGTGAGTGGACGTTTCCCGCACGGTGTGCTGGAGCGGA
GCAAGTTCCAAAGACGGGTGCCCACGGTACTGAAGGTCACGATCATCCTC
GGCGCCTTCGTATTTTTTGCCTTGAAGCTCACCTACAGTCGATCAACTCA
GGACGCGATCACAACCTTGGACCTCTCCTCCGTGTCTTCAGGTGGACAGA
AGAAACTGAAAGCGCAGGCAGGCCGGAGGATGGATGGCAAGACGGTCGCC
TATGTCATCTCCGTAACAGCGGACGGGCCCTACATGGACGGGGCTGCTGT
ATTGGCGCACAGTATCCGCAAGGCCTCGACAGACTCTAAGTACGGGATCG
ACCTTATTGCCATGGTCCATCCTAACGTCACCACCTCCCGTGCAGCCCTC
ATGCGCGCCGGCTGGAAAGTGCTCGAACGAGATATTCCCCTCGACATCAA
TGAAATCCAGGGCGACTACCTGAGAGAGCGTATCGCCAAGAACGGCTGCT
GCGGTGCGACCGAGCTACTGAAGCTCTACGCATGGCGCCTCACTGACTAC
CACCGCGTCGTGCACCTGGACATGGACTCCCTCCTCCTCCAACCCCTCGA
CGAACTATTTGACTTGTCAGGAAAAGATTTCTTGTACACATGTGACTATG
GAATGATGACTAGGGGCTCGAAAGCCTGCCCGGTGCAAGGGGGGTTTCTC
ATCTTGAAGCCCAATGAGGAGGATTTCAAGAGACTGGTGAACACCGTGAA
ACTTGGGGATTTTCGCGCAGGATCTGCATGGGGTGGGGAGCACATCGGGT
GGTATTGGGGGGGGATGACGATTCAAGGACTGCTCCCCTACTATTTCCAC
AAGCTCACCGACCCCACCCGTGCCAAGGAAGTGGACCGCTGCGTCTATAA
CAATATGTTCGACAACCCCGAGTGCAAGAATGCCAGCATCCCTATGATTA
AAAATGTGCATTTTACTGTGTGTCAGAAGCCATGGACTTGCACTACGCAC
GCTAAGAATGCGGCTTGCACGCCATTTATGGAGAAGTGGTTCCAGTTGCG
GAGAGAGCTCGAGAGCATGGAGACGGGAGCGTATGGAGAAGCGTGCGTAC
GAGGAAACTACCGGCCACTAGAATTCCTTCAAGATGATGTGCCGGCGGTG
GCCACAGGTGGAGCAGCGACCCCATAGTAGTTGTAGATGGAGATCATGGA
TTGACGAAGAGGATGGAAGAGTAGAAAGCAGGGGTAGCTATGACCATAGA
CACATGAAGTTATGAAGAACAAAATAATGTACGTATATTTGAAGCCGAAA
CCTTATTGAACGAGACGTTTGATCAAGGCACATGTATGCTGATGGTGCTG
CTGCTGCTGCTGCTGCCCCTCACCCATTGATGTCCCATCGTTCAAAAATC
AACGGCCAAGACGAAAGACAGCAACGGGC back to topprotein sequence of jgi.p|Nanoce1779_2|582514 >mRNA_3537-protein ID=mRNA_3537-protein|Name=jgi.p|Nanoce1779_2|582514|organism=Nannochloropsis oceanica|type=polypeptide|length=404bp
MPKHRGVSVCAGRGEVVSGRFPHGVLERSKFQRRVPTVLKVTIILGAFVF
FALKLTYSRSTQDAITTLDLSSVSSGGQKKLKAQAGRRMDGKTVAYVISV
TADGPYMDGAAVLAHSIRKASTDSKYGIDLIAMVHPNVTTSRAALMRAGW
KVLERDIPLDINEIQGDYLRERIAKNGCCGATELLKLYAWRLTDYHRVVH
LDMDSLLLQPLDELFDLSGKDFLYTCDYGMMTRGSKACPVQGGFLILKPN
EEDFKRLVNTVKLGDFRAGSAWGGEHIGWYWGGMTIQGLLPYYFHKLTDP
TRAKEVDRCVYNNMFDNPECKNASIPMIKNVHFTVCQKPWTCTTHAKNAA
CTPFMEKWFQLRRELESMETGAYGEACVRGNYRPLEFLQDDVPAVATGGA
ATP* back to topmRNA from alignment at scaffold_6:600982..603090- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3537 ID=mRNA_3537|Name=jgi.p|Nanoce1779_2|582514|organism=Nannochloropsis oceanica|type=mRNA|length=2109bp|location=Sequence derived from alignment at scaffold_6:600982..603090- (Nannochloropsis oceanica)
ACAGGCAGTACAAATATGCCCAAACATCGAGGCGTCAGCGTCTGTGCTGG
GCGTGGTGAGGTGGTGAGTGGACGTTTCCCGCACGGTGTGCTGGAGCGGA
GCAAGTTCCAAAGACGGGTGCCCACGGTACTGAAGGTCACGATCATCCTC
GGCGCCTTCGTATTTTTTGCCTTGAAGCTCACCTACAGTCGATCAACTCA
GGACGCGATCACAACCTTGGACCTCTCCTCCGTGTCTTCAGGTGGACAGA
AGAAACTGAAAGCGCAGGCAGGCCGGAGGATGGATGGCAAGACGGTCGCC
TATGTCATCTCCGTAACAGCGGACGGGCCCTACATGGACGGGGCTGCTGT
ATTGGCGCACAGTATCCGCAAGGCCTCGACAGACTCTAAGTACGGGATCG
ACCTTATTGCCATGGTCCATCCTAACGTCACCACCTCCCGTGCAGCCCTC
ATGCGCGCCGGCTGGAAGTAAGTTTTCAGGAGGATGGGGAGGGTGGGGCC
TTGGGGGTTGATTTATGCGAGATGTTGGCCTCATCGTATACGCTTTGCTC
TACTTTGTTGTTGAAAAGAAAATGAGAGGGTGCTGCGAATTGTTGCATCC
CAACTGTGGTGCAGGCTGAGCTTGCCGCATCCCTTCGCCCCTCATGCACT
CACGACCCGTTTTCCCCCATTTCCCCCCCCTCTGCATATATATATATATA
TATATATATATATATATAGAGTGCTCGAACGAGATATTCCCCTCGACATC
AATGAAATCCAGGGCGACTACCTGAGAGAGCGTATCGCCAAGAACGGCTG
CTGCGGTGCGACCGAGCTACTGAAGCTCTACGCATGGCGCCTCACTGACT
ACCACCGCGTCGTGCACCTGGACATGGACTCCCTCCTCCTCCAACCCCTC
GACGAACTATTTGACTTGTCAGGAAAAGATTTCTTGTACACATGTGACTA
TGGAATGATGACTAGGGGCTCGAAAGCCTGCCCGGTGCAAGGGGGGTTTC
TCATCTTGAAGCCCAATGAGGAGGATTTCAAGAGACTGGTGAACACCGTG
AAACTTGGGGATTTTCGCGCAGGATCTGCATGGGGTGGGGAGCACATCGG
GTGGTATTGGGGGGGGATGACGATTCAAGGTACGGAGGGGGGGTGCTATA
GTGAGTAGGATGGGAGCTGATGGTGAGGAGAGGGGTTGGAATGAGTCAGG
ACGGTTGACGGTGGAGAAAAGGATAGACAGCGGTGTTGGCAGCCCTTCCG
CGTGGCCAAGGGCTGTATAATTTCCCTTTTGTCTTTTCCAAACATGCAAA
CATAAATTCATCTCGCGTCTTTCCTTATTTTTCCTTCCTCTGTACTTTCC
ATTCCTCAGGACTGCTCCCCTACTATTTCCACAAGCTCACCGACCCCACC
CGTGCCAAGGAAGTGGACCGCTGCGTCTATAACAATATGTTCGACAACCC
CGAGTGCAAGAATGCCAGCATCCCTATGATTAAAAATGTGCATTTTACTG
TGTGTCAGAAGCCATGGACTTGCACTACGCACGCTAAGAATGCGGCTTGC
ACGCCATTTATGGAGAAGTGGTTCCAGTTGCGGAGAGAGGTACGTTTTGG
TTCGTAATAAGGAGTGGGCGGACTGTGGGTGTCATGTACCTTTAGAATGG
TAGCAAGCCTGTCAAATGCCCCATGTCGCCTCTTGTCACATCTACTTTCT
CCCTTTCGCTCCCAACTTTTCTTCACATTCAACACAGCTCGAGAGCATGG
AGACGGGAGCGTATGGAGAAGCGTGCGTACGAGGAAACTACCGGCCACTA
GAATTCCTTCAAGATGATGTGCCGGCGGTGGCCACAGGTGGAGCAGCGAC
CCCATAGTAGTTGTAGATGGAGATCATGGATTGACGAAGAGGATGGAAGA
GTAGAAAGCAGGGGTAGCTATGACCATAGACACATGAAGTTATGAAGAAC
AAAATAATGTACGTATATTTGAAGCCGAAACCTTATTGAACGAGACGTTT
GATCAAGGCACATGTATGCTGATGGTGCTGCTGCTGCTGCTGCTGCCCCT
CACCCATTGATGTCCCATCGTTCAAAAATCAACGGCCAAGACGAAAGACA
GCAACGGGC back to topCoding sequence (CDS) from alignment at scaffold_6:600982..603090- >mRNA_3537 ID=mRNA_3537|Name=jgi.p|Nanoce1779_2|582514|organism=Nannochloropsis oceanica|type=CDS|length=4848bp|location=Sequence derived from alignment at scaffold_6:600982..603090- (Nannochloropsis oceanica)
CTCGAGAGCATGGAGACGGGAGCGTATGGAGAAGCGTGCGTACGAGGAAA
CTACCGGCCACTAGAATTCCTTCAAGATGATGTGCCGGCGGTGGCCACAG
GTGGAGCAGCGACCCCATAGGACTGCTCCCCTACTATTTCCACAAGCTCA
CCGACCCCACCCGTGCCAAGGAAGTGGACCGCTGCGTCTATAACAATATG
TTCGACAACCCCGAGTGCAAGAATGCCAGCATCCCTATGATTAAAAATGT
GCATTTTACTGTGTGTCAGAAGCCATGGACTTGCACTACGCACGCTAAGA
ATGCGGCTTGCACGCCATTTATGGAGAAGTGGTTCCAGTTGCGGAGAGAG
AGTGCTCGAACGAGATATTCCCCTCGACATCAATGAAATCCAGGGCGACT
ACCTGAGAGAGCGTATCGCCAAGAACGGCTGCTGCGGTGCGACCGAGCTA
CTGAAGCTCTACGCATGGCGCCTCACTGACTACCACCGCGTCGTGCACCT
GGACATGGACTCCCTCCTCCTCCAACCCCTCGACGAACTATTTGACTTGT
CAGGAAAAGATTTCTTGTACACATGTGACTATGGAATGATGACTAGGGGC
TCGAAAGCCTGCCCGGTGCAAGGGGGGTTTCTCATCTTGAAGCCCAATGA
GGAGGATTTCAAGAGACTGGTGAACACCGTGAAACTTGGGGATTTTCGCG
CAGGATCTGCATGGGGTGGGGAGCACATCGGGTGGTATTGGGGGGGGATG
ACGATTCAAGATGCCCAAACATCGAGGCGTCAGCGTCTGTGCTGGGCGTG
GTGAGGTGGTGAGTGGACGTTTCCCGCACGGTGTGCTGGAGCGGAGCAAG
TTCCAAAGACGGGTGCCCACGGTACTGAAGGTCACGATCATCCTCGGCGC
CTTCGTATTTTTTGCCTTGAAGCTCACCTACAGTCGATCAACTCAGGACG
CGATCACAACCTTGGACCTCTCCTCCGTGTCTTCAGGTGGACAGAAGAAA
CTGAAAGCGCAGGCAGGCCGGAGGATGGATGGCAAGACGGTCGCCTATGT
CATCTCCGTAACAGCGGACGGGCCCTACATGGACGGGGCTGCTGTATTGG
CGCACAGTATCCGCAAGGCCTCGACAGACTCTAAGTACGGGATCGACCTT
ATTGCCATGGTCCATCCTAACGTCACCACCTCCCGTGCAGCCCTCATGCG
CGCCGGCTGGAACTCGAGAGCATGGAGACGGGAGCGTATGGAGAAGCGTG
CGTACGAGGAAACTACCGGCCACTAGAATTCCTTCAAGATGATGTGCCGG
CGGTGGCCACAGGTGGAGCAGCGACCCCATAGGACTGCTCCCCTACTATT
TCCACAAGCTCACCGACCCCACCCGTGCCAAGGAAGTGGACCGCTGCGTC
TATAACAATATGTTCGACAACCCCGAGTGCAAGAATGCCAGCATCCCTAT
GATTAAAAATGTGCATTTTACTGTGTGTCAGAAGCCATGGACTTGCACTA
CGCACGCTAAGAATGCGGCTTGCACGCCATTTATGGAGAAGTGGTTCCAG
TTGCGGAGAGAGAGTGCTCGAACGAGATATTCCCCTCGACATCAATGAAA
TCCAGGGCGACTACCTGAGAGAGCGTATCGCCAAGAACGGCTGCTGCGGT
GCGACCGAGCTACTGAAGCTCTACGCATGGCGCCTCACTGACTACCACCG
CGTCGTGCACCTGGACATGGACTCCCTCCTCCTCCAACCCCTCGACGAAC
TATTTGACTTGTCAGGAAAAGATTTCTTGTACACATGTGACTATGGAATG
ATGACTAGGGGCTCGAAAGCCTGCCCGGTGCAAGGGGGGTTTCTCATCTT
GAAGCCCAATGAGGAGGATTTCAAGAGACTGGTGAACACCGTGAAACTTG
GGGATTTTCGCGCAGGATCTGCATGGGGTGGGGAGCACATCGGGTGGTAT
TGGGGGGGGATGACGATTCAAGATGCCCAAACATCGAGGCGTCAGCGTCT
GTGCTGGGCGTGGTGAGGTGGTGAGTGGACGTTTCCCGCACGGTGTGCTG
GAGCGGAGCAAGTTCCAAAGACGGGTGCCCACGGTACTGAAGGTCACGAT
CATCCTCGGCGCCTTCGTATTTTTTGCCTTGAAGCTCACCTACAGTCGAT
CAACTCAGGACGCGATCACAACCTTGGACCTCTCCTCCGTGTCTTCAGGT
GGACAGAAGAAACTGAAAGCGCAGGCAGGCCGGAGGATGGATGGCAAGAC
GGTCGCCTATGTCATCTCCGTAACAGCGGACGGGCCCTACATGGACGGGG
CTGCTGTATTGGCGCACAGTATCCGCAAGGCCTCGACAGACTCTAAGTAC
GGGATCGACCTTATTGCCATGGTCCATCCTAACGTCACCACCTCCCGTGC
AGCCCTCATGCGCGCCGGCTGGAACTCGAGAGCATGGAGACGGGAGCGTA
TGGAGAAGCGTGCGTACGAGGAAACTACCGGCCACTAGAATTCCTTCAAG
ATGATGTGCCGGCGGTGGCCACAGGTGGAGCAGCGACCCCATAGGACTGC
TCCCCTACTATTTCCACAAGCTCACCGACCCCACCCGTGCCAAGGAAGTG
GACCGCTGCGTCTATAACAATATGTTCGACAACCCCGAGTGCAAGAATGC
CAGCATCCCTATGATTAAAAATGTGCATTTTACTGTGTGTCAGAAGCCAT
GGACTTGCACTACGCACGCTAAGAATGCGGCTTGCACGCCATTTATGGAG
AAGTGGTTCCAGTTGCGGAGAGAGAGTGCTCGAACGAGATATTCCCCTCG
ACATCAATGAAATCCAGGGCGACTACCTGAGAGAGCGTATCGCCAAGAAC
GGCTGCTGCGGTGCGACCGAGCTACTGAAGCTCTACGCATGGCGCCTCAC
TGACTACCACCGCGTCGTGCACCTGGACATGGACTCCCTCCTCCTCCAAC
CCCTCGACGAACTATTTGACTTGTCAGGAAAAGATTTCTTGTACACATGT
GACTATGGAATGATGACTAGGGGCTCGAAAGCCTGCCCGGTGCAAGGGGG
GTTTCTCATCTTGAAGCCCAATGAGGAGGATTTCAAGAGACTGGTGAACA
CCGTGAAACTTGGGGATTTTCGCGCAGGATCTGCATGGGGTGGGGAGCAC
ATCGGGTGGTATTGGGGGGGGATGACGATTCAAGATGCCCAAACATCGAG
GCGTCAGCGTCTGTGCTGGGCGTGGTGAGGTGGTGAGTGGACGTTTCCCG
CACGGTGTGCTGGAGCGGAGCAAGTTCCAAAGACGGGTGCCCACGGTACT
GAAGGTCACGATCATCCTCGGCGCCTTCGTATTTTTTGCCTTGAAGCTCA
CCTACAGTCGATCAACTCAGGACGCGATCACAACCTTGGACCTCTCCTCC
GTGTCTTCAGGTGGACAGAAGAAACTGAAAGCGCAGGCAGGCCGGAGGAT
GGATGGCAAGACGGTCGCCTATGTCATCTCCGTAACAGCGGACGGGCCCT
ACATGGACGGGGCTGCTGTATTGGCGCACAGTATCCGCAAGGCCTCGACA
GACTCTAAGTACGGGATCGACCTTATTGCCATGGTCCATCCTAACGTCAC
CACCTCCCGTGCAGCCCTCATGCGCGCCGGCTGGAACTCGAGAGCATGGA
GACGGGAGCGTATGGAGAAGCGTGCGTACGAGGAAACTACCGGCCACTAG
AATTCCTTCAAGATGATGTGCCGGCGGTGGCCACAGGTGGAGCAGCGACC
CCATAGGACTGCTCCCCTACTATTTCCACAAGCTCACCGACCCCACCCGT
GCCAAGGAAGTGGACCGCTGCGTCTATAACAATATGTTCGACAACCCCGA
GTGCAAGAATGCCAGCATCCCTATGATTAAAAATGTGCATTTTACTGTGT
GTCAGAAGCCATGGACTTGCACTACGCACGCTAAGAATGCGGCTTGCACG
CCATTTATGGAGAAGTGGTTCCAGTTGCGGAGAGAGAGTGCTCGAACGAG
ATATTCCCCTCGACATCAATGAAATCCAGGGCGACTACCTGAGAGAGCGT
ATCGCCAAGAACGGCTGCTGCGGTGCGACCGAGCTACTGAAGCTCTACGC
ATGGCGCCTCACTGACTACCACCGCGTCGTGCACCTGGACATGGACTCCC
TCCTCCTCCAACCCCTCGACGAACTATTTGACTTGTCAGGAAAAGATTTC
TTGTACACATGTGACTATGGAATGATGACTAGGGGCTCGAAAGCCTGCCC
GGTGCAAGGGGGGTTTCTCATCTTGAAGCCCAATGAGGAGGATTTCAAGA
GACTGGTGAACACCGTGAAACTTGGGGATTTTCGCGCAGGATCTGCATGG
GGTGGGGAGCACATCGGGTGGTATTGGGGGGGGATGACGATTCAAGATGC
CCAAACATCGAGGCGTCAGCGTCTGTGCTGGGCGTGGTGAGGTGGTGAGT
GGACGTTTCCCGCACGGTGTGCTGGAGCGGAGCAAGTTCCAAAGACGGGT
GCCCACGGTACTGAAGGTCACGATCATCCTCGGCGCCTTCGTATTTTTTG
CCTTGAAGCTCACCTACAGTCGATCAACTCAGGACGCGATCACAACCTTG
GACCTCTCCTCCGTGTCTTCAGGTGGACAGAAGAAACTGAAAGCGCAGGC
AGGCCGGAGGATGGATGGCAAGACGGTCGCCTATGTCATCTCCGTAACAG
CGGACGGGCCCTACATGGACGGGGCTGCTGTATTGGCGCACAGTATCCGC
AAGGCCTCGACAGACTCTAAGTACGGGATCGACCTTATTGCCATGGTCCA
TCCTAACGTCACCACCTCCCGTGCAGCCCTCATGCGCGCCGGCTGGAA back to top
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