jgi.p|Nanoce1779_2|612816, gene_10928 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|612816
Unique Namegene_10928
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_68:32804..36242 +

Link to JBrowse

Properties
Property NameValue
TranscriptId612902
ProteinId612816
Product namePHM/PNGase F domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_68supercontigscaffold_68:32804..36242 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL089ncniL089Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612816mRNA_10928-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612816mRNA_10928Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|612816

>mRNA_10928-protein ID=mRNA_10928-protein|Name=jgi.p|Nanoce1779_2|612816|organism=Nannochloropsis oceanica|type=polypeptide|length=290bp
MLLHSSLPPFLSQMLEVHFIYGNSAENKRINQAGFVIDYSPTLRQHDMGA
FVMGAPATVNSLNFTSNLIVHPGQHSFDYLSYCPPGCSQRYLSEKEGKAP
VPDRFILHAHLHMHTLAMGGEIQLLRTPRNSTALERTRLYHRSIWDYNNP
QGVTYASPGIPYLSGDSFLTRCTYDSSRETETVVYGPTTADEMCLSLVFY
YPAPLTAPSVLCFDYEGVSSPSVDFLRSKDKLTVGQCQSAHDFANMTANP
ELRDTITMLTGLIHVDNAVMKEVKDGFNDSSLALCEAKK*
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Synonyms
Publications